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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1274302..1278315+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011669-T1 ID=KJC3_011669-T1|Name=KJC3_011669-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4014bp|location=Sequence derived from alignment at ch8:1274302..1278315+ (Aspergillus niger KJC3)
AGCCAATTCCACGTCGAGAATCGCACCAACACCACGCTTCCAGGTCTCCT
CCAGCCCCACAATCTCTCCCTTGTTGGCTTCCTGGGCGAGCTTTCTCTCC
TTGTTCACAGATTCGGCAGCCTCCTTCATCTCGGCCAATTCCTTCTCAAG
CCCCCGTAGGATGTCTTCAAGCTGTGAATTGCCAATCAGCCAAGCATTCT
TTCCATTCTCTTCTAGCAGCGCCAGATTCTCGTGCCGCATCGATAAATGG
GAGCTGGCCGTGTAAGCCTTCTGCAGTGTCCGTCGCCATTCCTCCAGATC
AGGGGTTCCGTCAGCGGCTTTAGCAGGCGCCTCAGGCGCTTCATAGCGGG
AGAGGTCGATTCCGCCAGTCAAGGGCAGTCCGGCAGCCTTGCGGTCCACC
TCCTGCTGGATGAGTGGAGAAAACCGTGACTCAGGAAAAGCAGGAATGGA
CGGGTGGATGGTCGTTTTGGCATCCAAAGAAAGCTCCGCGGCAATTAGCT
TTTCTGCAGCTGCTCGTGCCTGGGTGGAAGGGGCCGGTTCGATGTCTAAG
AAGGTCCACGCGTTAGAAGGGAAATTCATAGCAGAGGTAAGGCAGCTTAC
AAGGAAGTGAATCGTGGGATTCGTTGATGAGAGGCATGTTGACTTAAACC
TGCGTATGAGAACCGGATAACAAGAAACTAGAAGCGGCAGGGGTCAATGC
GAAGTGATATCTTGTATAAAATCAAGCAGTGCCAGCAACAGCTCGCCATG
AGCGTCTCAGCTTTTGCGCCGAGCACGAGAGGGCGGTGAGCATTGGTGGG
TGACTCAGCAGTTTCTGCCGGAGATGATCTGGGGTGTTCGGGCTATACCG
TTTTGGGCAATCCAAGTATAGATGATCTCGTCGAACTGCTGAACAGGACG
TCTCCTTACCTCGCTCATTCTCCACACGATCATTACTTTCCCGGATTTTT
AGGCAAGACGGGCCTCTTCTCCACTTGACTGAAGGCTTAGCCTAGGCTTC
TCTATCAGACGAGGTTCATGCGATCTACAGGGTCCCTTGTGACAGGGCAG
GACTGGTCTCTGACTGGCCAGTTCCCCGCCTATGACCTTGACAGAGTCGC
AACGATGATGACTCAACCAGCCAACCGCATGTCATTCATCTTCAGAGCAG
AGTTCAAACTTATACTCTTGCACCTAAATCGACGCGGGGCTGGATAGAAC
ATTCCTGATCAAGCTTAGCCACGGATGACGACGGGAACGGACCAGACCCT
TTCTCCTACATTCCAATAGCCTTTTCACCAATCGCGCCTCTTCCGCATCC
TCCCCGCAAGGTTGCAGAGACCCTGCAGTGTCATCCCCGGAGCCGTCTAT
TCAAATTAGCCGGGCATGCCTTGTGATAGCTCCTGCCTCGGTCGGTCCCT
GCTTGCAATAAGAAGGGCGCATCCCCGTGGACAGGCTGAAGGCTCTTTGG
TACTGCAACGCTCCTAGAGCTTATGCCTTACCTCGGTGGAATGGCTAACT
TTAGGCTGGGTGTGGCTTTGGCCAGCAGCGTGGCAACGGCACTTGTGCTG
CTGCAACTGTTCTCACTGTTCCAGCACCAGAAACAGCCACTCAGTGTCAT
TGCACAGACTAAGTGGGCGCACAGAGCTGCTGTATCCGAGGCGAATAACG
ATGATCTTTTCTTACTAGGGGCAGGAAAGGCGGATATAACGGGGTAAATA
ACCTTCATCCTAGTAGCGCTGCATAGATGCTGATACGTTATCTGCCAGAC
CTGTTGTTGAGTTAGGGCTGAATGGCTATGCTAGCTTGGACCAGATTGGG
ACTGGTCTTCGGCAGAGAATCTATTCTCGGGCTTTCATTGTCGCCAATAC
TAATAATCCAGATGACACTTTCATCTACCTGATCCTGGATGCATTGACGG
GGGACACTGCTGTCCGACATGGAGTACTTGAGGGCCTTGCTAGCCTGGGC
AGCGAGTATGCTCGATATAATGAGCAGAACATCGCCCTTACAGGGACACA
TTCTCATTCAGGCCCAGGTGCCTGGATGAATTATCTCCTTCCTCAAATTC
CCACCAAAGGTTTTGATAAACAGAGTTACCAGGCGATTGTCGACGGTGTC
CTCCTCTCAATCAAGCGAGCCCATGAAGGTTTAGCGCCCGGGCGTCTCAG
CTTTGGGTCCATAGACCTAGAAGATGCCAATATAAATAGAAGCCCCTATG
CTTATGACGCCAATCCTGCAGAAGAGAAAGCTCGGTACTCGGCAAATGTG
GACAAGACGCTGACCCTGTTGAGGTTTGATCGAGAATCCGACAACAAGAC
CACTGCTGTACTGACCTTCTTCCCCGTACATGGCACATCTATGTACAATA
ATAATACTCTAACCACTGGAGATAACAAAGGTGTGGCCGCTTGGCTCTTT
GAGCGGAGTGTTAAGGATGACCAAAAATTCTCGGATGACTTTGTCGCAGG
CTTTTCTCAGTCAAATGTTGGCGATACTAGCCCAAATGTACTGGGAGCTT
GGTGTGAGGATGGCTCTGGACAAGAATGCCGATACGCAGATAGCACATGC
GGCGGGAAGACGGAGGACTGCCACGGCCGTGGACCTTATTTTCGCGAGAA
GGATAACGGCGCCAAGAGCTGCTTCGAGATCGGACGGCGACAATACGCGG
CTGCGAAAGAACTGTATGCCAACCTGGACTCCAATCCTGTTCGGATTCTT
TCAAGCGCCGATGTCCGCTCATTCCACACTTACCAGGACCTGTCCAACTA
CACATTCACGTCGCCGTTCAATGGGAGTACCCTAAAAACCTGTCCTGCCG
CATTGGGATTCTCGTTTGCAGCGGGTACCACGGACGGGCCAGGACTTTTC
GACTTTACCCAGAATGGCACGGGACCAGCTGATTCCAATCCTCTGTGGTA
TGTCGCTCGCGCTTTCTTGCACCAGCCGTCAAAAGAGCAGCAGGCGTGTC
AAGCGCCAAAGCAGGTCCTTCTCGATGTGGGACCAATCACACAGCCGTAT
GCCTGGACACCTAATATCGTGGACATTCAGGTCCTGAGAGTGGGTCAACT
CTTCATTGTCATCTCGACAAGCGAAGCCACTACCATGTCTGGACGACGCT
GGAAAGAAGCGATTGGCAGCTCTGCCAAAGAGGTTCTTGGAGTGGCAGAG
CCTCTTGTGGTCCTAGGTGCGCCGTCTAATAGCTATGCTCATTACGTAGC
CACCGAGGAGGAATACGGAGTGCAGCGCTACGAGGGAGCTTCGACTCTAT
ACGGCCCCAACACACTTGCAGCATACATCAACCTGACCCTTACGTATCTG
CCGTATCTGGGAAAGTCAGCTCAGACAGGCAGCTTACCGTCGCTATCCTC
CGGAAAGATTCCTCCCATCAACACCAACAAGTCCCTGACTTTTATCCCCT
CGGTTATATATGACGGGTCGCCAATCAGCAAAGCATTTGGGGATGTTGTA
TCCTCGTCGGCAAATGTCACTTACGGGCCTGGAGACATGGTGAATGTCAC
GTTTGTGGGAGCGAATCCCCGGAATAACCTACGGCAGGAATCGACGTTTG
CAGCCGTGGAGAGGTACAACTTAGCTACCGAATCATGGGATGTTGTGCGT
ACTGACAGCGACTGGAATCTTCTGTATAACTGGGAGAGGACGAGTACGAT
TTTGGGGTATAGCGAGGTCACTCTCCAATGGCAGATCGAGGACGAATATT
ATAACACGGGAAACCCCGATCCCGTCCAAAGTGGAACGTACCGGTTCCAC
TATTACGGCGATTCCAGGAGTGTGCAAGGCAAGATATCATCCTTCGAGGG
GATCAGTGAAGCGTTTACGGTTGCAGTCAGCTGAGGGCTGGCCTATACTA
TCCTGATGGTGGAGGCTGTAACCAAGCGGGAGGGAGTAGGATGATGAGAC
TGAACTGAACGTATGTGAAAGTAAGAAGTACCTATCAATAGCAAGGAGCT
ATATTTGGATCAATATGTTTAATTGCAACCGGGTATCTTGATCTTGCTGC
TTGGTGTTTGGCTG back to topCoding sequence (CDS) from alignment at ch8:1274302..1278315+ >KJC3_011669-T1 ID=KJC3_011669-T1|Name=KJC3_011669-T1|organism=Aspergillus niger KJC3|type=CDS|length=4614bp|location=Sequence derived from alignment at ch8:1274302..1278315+ (Aspergillus niger KJC3)
ATGCCTTACCTCGGTGGAATGGCTAACTTTAGGCTGGGTGTGGCTTTGGC
CAGCAGCGTGGCAACGGCACTTGTGCTGCTGCAACTGTTCTCACTGTTCC
AGCACCAGAAACAGCCACTCAGTGTCATTGCACAGACTAAGTGGGCGCAC
AGAGCTGCTGTATCCGAGGCGAATAACGATGATCTTTTCTTACTAGGGGC
AGGAAAGGCGGATATAACGGGACCTGTTGTTGAGTTAGGGCTGAATGGCT
ATGCTAGCTTGGACCAGATTGGGACTGGTCTTCGGCAGAGAATCTATTCT
CGGGCTTTCATTGTCGCCAATACTAATAATCCAGATGACACTTTCATCTA
CCTGATCCTGGATGCATTGACGGGGGACACTGCTGTCCGACATGGAGTAC
TTGAGGGCCTTGCTAGCCTGGGCAGCGAGTATGCTCGATATAATGAGCAG
AACATCGCCCTTACAGGGACACATTCTCATTCAGGCCCAGGTGCCTGGAT
GAATTATCTCCTTCCTCAAATTCCCACCAAAGGTTTTGATAAACAGAGTT
ACCAGGCGATTGTCGACGGTGTCCTCCTCTCAATCAAGCGAGCCCATGAA
GGTTTAGCGCCCGGGCGTCTCAGCTTTGGGTCCATAGACCTAGAAGATGC
CAATATAAATAGAAGCCCCTATGCTTATGACGCCAATCCTGCAGAAGAGA
AAGCTCGGTACTCGGCAAATGTGGACAAGACGCTGACCCTGTTGAGGTTT
GATCGAGAATCCGACAACAAGACCACTGCTGTACTGACCTTCTTCCCCGT
ACATGGCACATCTATGTACAATAATAATACTCTAACCACTGGAGATAACA
AAGGTGTGGCCGCTTGGCTCTTTGAGCGGAGTGTTAAGGATGACCAAAAA
TTCTCGGATGACTTTGTCGCAGGCTTTTCTCAGTCAAATGTTGGCGATAC
TAGCCCAAATGTACTGGGAGCTTGGTGTGAGGATGGCTCTGGACAAGAAT
GCCGATACGCAGATAGCACATGCGGCGGGAAGACGGAGGACTGCCACGGC
CGTGGACCTTATTTTCGCGAGAAGGATAACGGCGCCAAGAGCTGCTTCGA
GATCGGACGGCGACAATACGCGGCTGCGAAAGAACTGTATGCCAACCTGG
ACTCCAATCCTGTTCGGATTCTTTCAAGCGCCGATGTCCGCTCATTCCAC
ACTTACCAGGACCTGTCCAACTACACATTCACGTCGCCGTTCAATGGGAG
TACCCTAAAAACCTGTCCTGCCGCATTGGGATTCTCGTTTGCAGCGGGTA
CCACGGACGGGCCAGGACTTTTCGACTTTACCCAGAATGGCACGGGACCA
GCTGATTCCAATCCTCTGTGGTATGTCGCTCGCGCTTTCTTGCACCAGCC
GTCAAAAGAGCAGCAGGCGTGTCAAGCGCCAAAGCAGGTCCTTCTCGATG
TGGGACCAATCACACAGCCGTATGCCTGGACACCTAATATCGTGGACATT
CAGGTCCTGAGAGTGGGTCAACTCTTCATTGTCATCTCGACAAGCGAAGC
CACTACCATGTCTGGACGACGCTGGAAAGAAGCGATTGGCAGCTCTGCCA
AAGAGGTTCTTGGAGTGGCAGAGCCTCTTGTGGTCCTAGGTGCGCCGTCT
AATAGCTATGCTCATTACGTAGCCACCGAGGAGGAATACGGAGTGCAGCG
CTACGAGGGAGCTTCGACTCTATACGGCCCCAACACACTTGCAGCATACA
TCAACCTGACCCTTACGTATCTGCCGTATCTGGGAAAGTCAGCTCAGACA
GGCAGCTTACCGTCGCTATCCTCCGGAAAGATTCCTCCCATCAACACCAA
CAAGTCCCTGACTTTTATCCCCTCGGTTATATATGACGGGTCGCCAATCA
GCAAAGCATTTGGGGATGTTGTATCCTCGTCGGCAAATGTCACTTACGGG
CCTGGAGACATGGTGAATGTCACGTTTGTGGGAGCGAATCCCCGGAATAA
CCTACGGCAGGAATCGACGTTTGCAGCCGTGGAGAGGTACAACTTAGCTA
CCGAATCATGGGATGTTGTGCGTACTGACAGCGACTGGAATCTTCTGTAT
AACTGGGAGAGGACGAGTACGATTTTGGGGTATAGCGAGGTCACTCTCCA
ATGGCAGATCGAGGACGAATATTATAACACGGGAAACCCCGATCCCGTCC
AAAGTGGAACGTACCGGTTCCACTATTACGGCGATTCCAGGAGTGTGCAA
GGCAAGATATCATCCTTCGAGGGGATCAGTGAAGCGTTTACGGTTGCAGT
CAGCTGAATGCCTTACCTCGGTGGAATGGCTAACTTTAGGCTGGGTGTGG
CTTTGGCCAGCAGCGTGGCAACGGCACTTGTGCTGCTGCAACTGTTCTCA
CTGTTCCAGCACCAGAAACAGCCACTCAGTGTCATTGCACAGACTAAGTG
GGCGCACAGAGCTGCTGTATCCGAGGCGAATAACGATGATCTTTTCTTAC
TAGGGGCAGGAAAGGCGGATATAACGGGACCTGTTGTTGAGTTAGGGCTG
AATGGCTATGCTAGCTTGGACCAGATTGGGACTGGTCTTCGGCAGAGAAT
CTATTCTCGGGCTTTCATTGTCGCCAATACTAATAATCCAGATGACACTT
TCATCTACCTGATCCTGGATGCATTGACGGGGGACACTGCTGTCCGACAT
GGAGTACTTGAGGGCCTTGCTAGCCTGGGCAGCGAGTATGCTCGATATAA
TGAGCAGAACATCGCCCTTACAGGGACACATTCTCATTCAGGCCCAGGTG
CCTGGATGAATTATCTCCTTCCTCAAATTCCCACCAAAGGTTTTGATAAA
CAGAGTTACCAGGCGATTGTCGACGGTGTCCTCCTCTCAATCAAGCGAGC
CCATGAAGGTTTAGCGCCCGGGCGTCTCAGCTTTGGGTCCATAGACCTAG
AAGATGCCAATATAAATAGAAGCCCCTATGCTTATGACGCCAATCCTGCA
GAAGAGAAAGCTCGGTACTCGGCAAATGTGGACAAGACGCTGACCCTGTT
GAGGTTTGATCGAGAATCCGACAACAAGACCACTGCTGTACTGACCTTCT
TCCCCGTACATGGCACATCTATGTACAATAATAATACTCTAACCACTGGA
GATAACAAAGGTGTGGCCGCTTGGCTCTTTGAGCGGAGTGTTAAGGATGA
CCAAAAATTCTCGGATGACTTTGTCGCAGGCTTTTCTCAGTCAAATGTTG
GCGATACTAGCCCAAATGTACTGGGAGCTTGGTGTGAGGATGGCTCTGGA
CAAGAATGCCGATACGCAGATAGCACATGCGGCGGGAAGACGGAGGACTG
CCACGGCCGTGGACCTTATTTTCGCGAGAAGGATAACGGCGCCAAGAGCT
GCTTCGAGATCGGACGGCGACAATACGCGGCTGCGAAAGAACTGTATGCC
AACCTGGACTCCAATCCTGTTCGGATTCTTTCAAGCGCCGATGTCCGCTC
ATTCCACACTTACCAGGACCTGTCCAACTACACATTCACGTCGCCGTTCA
ATGGGAGTACCCTAAAAACCTGTCCTGCCGCATTGGGATTCTCGTTTGCA
GCGGGTACCACGGACGGGCCAGGACTTTTCGACTTTACCCAGAATGGCAC
GGGACCAGCTGATTCCAATCCTCTGTGGTATGTCGCTCGCGCTTTCTTGC
ACCAGCCGTCAAAAGAGCAGCAGGCGTGTCAAGCGCCAAAGCAGGTCCTT
CTCGATGTGGGACCAATCACACAGCCGTATGCCTGGACACCTAATATCGT
GGACATTCAGGTCCTGAGAGTGGGTCAACTCTTCATTGTCATCTCGACAA
GCGAAGCCACTACCATGTCTGGACGACGCTGGAAAGAAGCGATTGGCAGC
TCTGCCAAAGAGGTTCTTGGAGTGGCAGAGCCTCTTGTGGTCCTAGGTGC
GCCGTCTAATAGCTATGCTCATTACGTAGCCACCGAGGAGGAATACGGAG
TGCAGCGCTACGAGGGAGCTTCGACTCTATACGGCCCCAACACACTTGCA
GCATACATCAACCTGACCCTTACGTATCTGCCGTATCTGGGAAAGTCAGC
TCAGACAGGCAGCTTACCGTCGCTATCCTCCGGAAAGATTCCTCCCATCA
ACACCAACAAGTCCCTGACTTTTATCCCCTCGGTTATATATGACGGGTCG
CCAATCAGCAAAGCATTTGGGGATGTTGTATCCTCGTCGGCAAATGTCAC
TTACGGGCCTGGAGACATGGTGAATGTCACGTTTGTGGGAGCGAATCCCC
GGAATAACCTACGGCAGGAATCGACGTTTGCAGCCGTGGAGAGGTACAAC
TTAGCTACCGAATCATGGGATGTTGTGCGTACTGACAGCGACTGGAATCT
TCTGTATAACTGGGAGAGGACGAGTACGATTTTGGGGTATAGCGAGGTCA
CTCTCCAATGGCAGATCGAGGACGAATATTATAACACGGGAAACCCCGAT
CCCGTCCAAAGTGGAACGTACCGGTTCCACTATTACGGCGATTCCAGGAG
TGTGCAAGGCAAGATATCATCCTTCGAGGGGATCAGTGAAGCGTTTACGG
TTGCAGTCAGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011669-T1.utr3p1 | KJC3_011669-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038445 |
| DBxref | InterPro:IPR031329 |
| DBxref | InterPro:IPR031331 |
| DBxref | PFAM:PF17048 |
| DBxref | PFAM:PF04734 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1274302..1278315 + |
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