|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1284905..1286347- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011672-T1 ID=KJC3_011672-T1|Name=KJC3_011672-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1443bp|location=Sequence derived from alignment at ch8:1284905..1286347- (Aspergillus niger KJC3)
AACTCACACTTTCGCTCTTTCTCTTCTTTGATTCGTACCCCTTTTCTATC
AGTCTCCTTCTGGCGTTATCATCTTCTTTTGTTTGTTTGATCATGCCACA
CAGACATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGGGTAT
GTTTGGCCTCGTTGCTGCCTGTTCACTTTCGTGCGGTGAAACTGATTGTT
TGGTGATTCTACAGGGCATCTATTATTTTGCGTCGCACCGCTACCTTTGG
CCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCAT
CTACGTCCTGCTCTTCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGT
CCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGCGCGTTCCTGGTACTA
GGGGAGGGGGCGGCGATTGTTGCTGCTCTCTTTGAAGCCTTCTTTGTCGA
TGAGACCCTCGTGGACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATG
GCGAACTCGTCACCATGTCGAGGGTTTTGTACCCCCAGGGCGATGATGTC
GTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTC
ACTGCGGCAAATCGTGGAATTCATTGTGCTTCTACCGCTGAACTTTATCC
CGGTGGCCGGAACACCCATGTTCCTCGTGCTGACCGGCTACCGGGCGGGC
CCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACA
GCGCAAAGAAAGGATCCGCCGCAGACAATTGCAATATACCACGTGGGTTT
CAACCTTCTTTCCCCTGACACAACCCCCTTTGAAGGTCTACCGAGGTTCA
TACTAACAATCAACCACGAGGCAACCTAGATTTGGGACGGTGGCTCTGAT
ACTTCAGTTGGTCCCCATTTTGTCCATGTTTTTCCTGATGTCAACCGCGG
TTGGATCTGCTCTTTGGACGGTGGATCTCGAAAACAAGCGCGATCTTTTG
GGCAGGAGGCCCGGGCGAGATCCCGAGGGTCTCTACCACGATGATTACAA
TGATGATGATGCGATGATTTAGTTTGTGTTTTTTTCTTTTCTTGATACTT
CTTTAGCCTATATCCCGCTTCTTTTTAGCGTCATCCATCTTCCTCGCTTC
TTTACAGCCCTTTTGCCTCTAAGGGAATTTCGATTTGCCTGGACAATTGT
TGTGATTTCAACGTACAAAATACTGATTTTAATGTGGTCACACCGATGAC
CGGGATTTCCGAACACTTTTTGGCGTCCTGAATCATGAGTAGAGAGGGTC
GGTGGTTCGATCGTCCCATTGTTGCCATGGTTGGTCCCTGCGACAGGATG
CAAACAGACTGCCGACTCCACCGGCGGGCTTTTTCCCTAAGTACTTTGCT
AGACAGCGAGCCTTTCGCTGGTTGAGGATAAGTAAAAGTAATT back to topCoding sequence (CDS) from alignment at ch8:1284905..1286347- >KJC3_011672-T1 ID=KJC3_011672-T1|Name=KJC3_011672-T1|organism=Aspergillus niger KJC3|type=CDS|length=2475bp|location=Sequence derived from alignment at ch8:1284905..1286347- (Aspergillus niger KJC3)
ATTTGGGACGGTGGCTCTGATACTTCAGTTGGTCCCCATTTTGTCCATGT
TTTTCCTGATGTCAACCGCGGTTGGATCTGCTCTTTGGACGGTGGATCTC
GAAAACAAGCGCGATCTTTTGGGCAGGAGGCCCGGGCGAGATCCCGAGGG
TCTCTACCACGATGATTACAATGATGATGATGCGATGATTTAGGGCATCT
ATTATTTTGCGTCGCACCGCTACCTTTGGCCTCTTTTCAAGACTCGTCTG
ATTCCGATCGTCCTCCTGTCCGCTTTCATCTACGTCCTGCTCTTCCTATT
TGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGG
CCTGGATCAATGGCGCGTTCCTGGTACTAGGGGAGGGGGCGGCGATTGTT
GCTGCTCTCTTTGAAGCCTTCTTTGTCGATGAGACCCTCGTGGACATTTT
CGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACCATGTCGA
GGGTTTTGTACCCCCAGGGCGATGATGTCGTCAAACGGCTCGGCAAGCCC
ACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAAATCGTGGAATT
CATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACACCCATGT
TCCTCGTGCTGACCGGCTACCGGGCGGGCCCCTTCCACCATTGGCGATAC
TTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAAAGGATCCGCCG
CAGACAATTGCAATATACCACATGCCACACAGACATATCGATACTACTAA
AGCAGCGTGGCTATATCCCCTGCGGATTTGGGACGGTGGCTCTGATACTT
CAGTTGGTCCCCATTTTGTCCATGTTTTTCCTGATGTCAACCGCGGTTGG
ATCTGCTCTTTGGACGGTGGATCTCGAAAACAAGCGCGATCTTTTGGGCA
GGAGGCCCGGGCGAGATCCCGAGGGTCTCTACCACGATGATTACAATGAT
GATGATGCGATGATTTAGGGCATCTATTATTTTGCGTCGCACCGCTACCT
TTGGCCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTT
TCATCTACGTCCTGCTCTTCCTATTTGCATATTTGCCCCAAGTGGCCTTC
CTGTCCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGCGCGTTCCTGGT
ACTAGGGGAGGGGGCGGCGATTGTTGCTGCTCTCTTTGAAGCCTTCTTTG
TCGATGAGACCCTCGTGGACATTTTCGACTCGGTGCTCGTGAGTGAGGGC
CATGGCGAACTCGTCACCATGTCGAGGGTTTTGTACCCCCAGGGCGATGA
TGTCGTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGT
TCTCACTGCGGCAAATCGTGGAATTCATTGTGCTTCTACCGCTGAACTTT
ATCCCGGTGGCCGGAACACCCATGTTCCTCGTGCTGACCGGCTACCGGGC
GGGCCCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAAC
AACAGCGCAAAGAAAGGATCCGCCGCAGACAATTGCAATATACCACATGC
CACACAGACATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGG
ATTTGGGACGGTGGCTCTGATACTTCAGTTGGTCCCCATTTTGTCCATGT
TTTTCCTGATGTCAACCGCGGTTGGATCTGCTCTTTGGACGGTGGATCTC
GAAAACAAGCGCGATCTTTTGGGCAGGAGGCCCGGGCGAGATCCCGAGGG
TCTCTACCACGATGATTACAATGATGATGATGCGATGATTTAGGGCATCT
ATTATTTTGCGTCGCACCGCTACCTTTGGCCTCTTTTCAAGACTCGTCTG
ATTCCGATCGTCCTCCTGTCCGCTTTCATCTACGTCCTGCTCTTCCTATT
TGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGG
CCTGGATCAATGGCGCGTTCCTGGTACTAGGGGAGGGGGCGGCGATTGTT
GCTGCTCTCTTTGAAGCCTTCTTTGTCGATGAGACCCTCGTGGACATTTT
CGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACCATGTCGA
GGGTTTTGTACCCCCAGGGCGATGATGTCGTCAAACGGCTCGGCAAGCCC
ACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAAATCGTGGAATT
CATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACACCCATGT
TCCTCGTGCTGACCGGCTACCGGGCGGGCCCCTTCCACCATTGGCGATAC
TTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAAAGGATCCGCCG
CAGACAATTGCAATATACCACATGCCACACAGACATATCGATACTACTAA
AGCAGCGTGGCTATATCCCCTGCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011672-T1.utr3p1 | KJC3_011672-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011672-T1.utr5p1 | KJC3_011672-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF07264 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1284905..1286347 - |
|
