You are here

Home

KJC3_011676-T1, KJC3_011676-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011676-T1
Unique NameKJC3_011676-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1293150..1293774+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011676-T1 ID=KJC3_011676-T1|Name=KJC3_011676-T1|organism=Aspergillus niger KJC3|type=mRNA|length=625bp|location=Sequence derived from alignment at ch8:1293150..1293774+ (Aspergillus niger KJC3)
ATGGCCGGTAGTTTTGCCGGTCTCACCAACTCATTCCTGTCTGGCCCCAT
CGAGCACGTCCGTATCCGTCTGCAAACCCAGCCTCACGGAGCTGACCGTC
TGTACAACGGTCCCATCGACTGTATCCGCAAGCTCTGCAACCAGGGCGGT
GTCCTCAAGGGTCTCTTCCGCGGCCAGAATGTCACCTACTTCCGTGAAGC
CCAGGCCTACGGAACCTGGTTCTTGGCTTTTGAGTACCTCATGAACCAGG
ACGCCAAGCGCAACAACGTCAAGCGCGAGGACATCTCCAGCTTGAAGGTC
GCTACCTACGGTGGTCTGGCCGGTGAGGCGCTTTGGCTGTCCAGCTACCC
CTTTGACGTGGTCAAGAGTAAGATGCAGTGCGACGGCTTCGGCGCCCAGC
AGCAGTTCAAGAGCATGACCGACTGCTTCAAGAAGACGTATGCTGTTGAG
GGTCTGGCCGGCTTCTGGAAGGGTATTGGCCCTACCCTGCTTAGGGCTAT
GCCAGTGTCGGCGGGTACTTTTGCTGTGTACGTTTATCCCTCACCTCTAC
TTACTCTCCGTCTTTTATCTTTGGGTTACTAATATGCGTTACAGTGTCGA
GCTCACCATGAGAGCCCTGGGCTAG
back to top

Coding sequence (CDS) from alignment at ch8:1293150..1293774+

>KJC3_011676-T1 ID=KJC3_011676-T1|Name=KJC3_011676-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch8:1293150..1293774+ (Aspergillus niger KJC3)
ATGGCCGGTAGTTTTGCCGGTCTCACCAACTCATTCCTGTCTGGCCCCAT
CGAGCACGTCCGTATCCGTCTGCAAACCCAGCCTCACGGAGCTGACCGTC
TGTACAACGGTCCCATCGACTGTATCCGCAAGCTCTGCAACCAGGGCGGT
GTCCTCAAGGGTCTCTTCCGCGGCCAGAATGTCACCTACTTCCGTGAAGC
CCAGGCCTACGGAACCTGGTTCTTGGCTTTTGAGTACCTCATGAACCAGG
ACGCCAAGCGCAACAACGTCAAGCGCGAGGACATCTCCAGCTTGAAGGTC
GCTACCTACGGTGGTCTGGCCGGTGAGGCGCTTTGGCTGTCCAGCTACCC
CTTTGACGTGGTCAAGAGTAAGATGCAGTGCGACGGCTTCGGCGCCCAGC
AGCAGTTCAAGAGCATGACCGACTGCTTCAAGAAGACGTATGCTGTTGAG
GGTCTGGCCGGCTTCTGGAAGGGTATTGGCCCTACCCTGCTTAGGGCTAT
GCCAGTGTCGGCGGGTACTTTTGCTGTTGTCGAGCTCACCATGAGAGCCC
TGGGCTAGATGGCCGGTAGTTTTGCCGGTCTCACCAACTCATTCCTGTCT
GGCCCCATCGAGCACGTCCGTATCCGTCTGCAAACCCAGCCTCACGGAGC
TGACCGTCTGTACAACGGTCCCATCGACTGTATCCGCAAGCTCTGCAACC
AGGGCGGTGTCCTCAAGGGTCTCTTCCGCGGCCAGAATGTCACCTACTTC
CGTGAAGCCCAGGCCTACGGAACCTGGTTCTTGGCTTTTGAGTACCTCAT
GAACCAGGACGCCAAGCGCAACAACGTCAAGCGCGAGGACATCTCCAGCT
TGAAGGTCGCTACCTACGGTGGTCTGGCCGGTGAGGCGCTTTGGCTGTCC
AGCTACCCCTTTGACGTGGTCAAGAGTAAGATGCAGTGCGACGGCTTCGG
CGCCCAGCAGCAGTTCAAGAGCATGACCGACTGCTTCAAGAAGACGTATG
CTGTTGAGGGTCTGGCCGGCTTCTGGAAGGGTATTGGCCCTACCCTGCTT
AGGGCTATGCCAGTGTCGGCGGGTACTTTTGCTGTTGTCGAGCTCACCAT
GAGAGCCCTGGGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011676KJC3_011676Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011676-T1.exon1KJC3_011676-T1.exon1Aspergillus niger KJC3exon
KJC3_011676-T1.exon2KJC3_011676-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011676-T1.cdsKJC3_011676-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011676-T1KJC3_011676-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1293150..1293774 +
Powered by Drupal