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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1314577..1316054- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011685-T1 ID=KJC3_011685-T1|Name=KJC3_011685-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1478bp|location=Sequence derived from alignment at ch8:1314577..1316054- (Aspergillus niger KJC3)
CCTCTGCCAATTGACCTCCCCCCTCGTCATCCCCGCTCTTTCGCGCGCTT
CCTCGACTTCCGCGATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCC
TACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCAT
CGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCC
CCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCT
GAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTT
GCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACCTCCGTAAGTCG
CCCCATCCAGCTTCGAGTCAGGTCTGCCTCGGTGCATATCATCATCAGGA
TTTCAAGGGGGCCATCTGAGCCTGTCTATCGCTTTTCATCAGTCTATGGA
GGATTGTTCTGTCTCAATGGATCTGCGGCTGATGAGCTGGTCGTCTAGTT
ACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCCGTTTCCGT
GGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGTTGCATTGC
CTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCACCATCGAGG
CTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACGATATCGAC
ATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGA
CGCTATTGTTGAGAGTGAGTAACCAGTAAATTCATGTGTAGGTCATGAGA
CTCCTACTAACGATATTACGTAGCTTCCAACGCCGAATATGCCACCGAGA
CCCGTGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGAC
AAGTGGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCG
CTAAGCGGCATCTGTATTTGCCAATATGACACCGGACACGGTGTCCATGT
GACACTCCCCTTGGAAGAGATGCGAGAAAAACATGATATTAGAAAGAAAG
CCTTTCCGACCTAGAAAGCTTGGCTTGTAGCCACCCCCATTTATTCCCAC
GCTGTACATATCTCACGCCCAACCCCCTTCGCCTCCCTGATTACCTCCTG
TACTAGTCGGGTCTACCGGAATTGATCAGATCGGCCACTCGATTCCGGGT
CTGGTTTTGTCTTTGATGTTGAAGGAAATCCTGCATGTTGTGTTGTTCTT
TTTACTCTTGTTTGTCTAGGGATCCAATCAAAGAATTTTTCCTTTGTGAT
GTGCGGGAATAGTGCTTAAACAACGACCTTTCATCAGTGCAGCAACCATG
CTCAACTATAAGCTATTGGAACACAGAGCAATACACTGGTCTGCCATTAT
CTGCCGCCACTCGCTCACAGCCCAACCAAGCACATAATGTCTTCAACACT
GCGGCATTCAGCTTGCATTCTCTTCAGC back to topCoding sequence (CDS) from alignment at ch8:1314577..1316054- >KJC3_011685-T1 ID=KJC3_011685-T1|Name=KJC3_011685-T1|organism=Aspergillus niger KJC3|type=CDS|length=2025bp|location=Sequence derived from alignment at ch8:1314577..1316054- (Aspergillus niger KJC3)
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCCCTTCCAACGCCGAATATGCCACCGA
GACCCGTGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTG
ACAAGTGGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTAC
CGCTAATTACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCC
GTTTCCGTGGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGT
TGCATTGCCTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCAC
CATCGAGGCTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACG
ATATCGACATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGC
CCTGTCGACGCTATTGTTGAGAATGGCCGCCCCCAAGTCCGTCGCCAGGC
TCGTCGCCTACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCCTTG
GGATCCATCGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCCAGC
TGGTCCCCCCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGGACG
AAGGTGCTGAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATGGCT
GAGTTGTTGCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACCTCC
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011685-T1.utr3p1 | KJC3_011685-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011685-T1.utr5p1 | KJC3_011685-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017900 |
| DBxref | InterPro:IPR017896 |
| DBxref | InterPro:IPR010226 |
| DBxref | PFAM:PF13187 |
| DBxref | PFAM:PF12838 |
| DBxref | PFAM:PF12800 |
| DBxref | PFAM:PF13237 |
| DBxref | PFAM:PF00037 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1314577..1316054 - |
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