You are here

Home

KJC3_011689-T1, KJC3_011689-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011689-T1
Unique NameKJC3_011689-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1322523..1323826-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011689-T1 ID=KJC3_011689-T1|Name=KJC3_011689-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1304bp|location=Sequence derived from alignment at ch8:1322523..1323826- (Aspergillus niger KJC3)
ATGTCTTCTGATACAAACCTCAAAGATCCTACCGTCCTCCATAAGGTCGC
GCGGGTAGTCCATGCGTGGAAGCGAGAGTCAAGCATGCTCCAAATGGTCA
CATCATTCATCTCAAAGCCCCAATCGATTCAAGCGGCAGACGCGCGTCAG
CATACCGTATGGTTGTTCGATAACACTGCCTATCAACTACCGGCGGCCAC
AACATCAAAACAGGTATCATGGCGCGCAGAAGTCGTGGCCTGCGCTTTCC
GCAAGAATAGCCGAAGGGATATCACCAAGCTCGTCGCCATGATTGCAGAT
CTCATTGGACTGGACGGAGAGATGGGAACGGACAAGGAGACACGCCATCG
GATAACAGAACGGCTACAGCCATTCCTGTTTCATACTGCCTCTGCACACC
TAATGACGCTAGAAACCCCTTTGCCGAACAGCACCATCCAGATGCAGAAG
ATCGGGCCCACAGATGACAATGGCATTAGTAGTCAGACAATCAGCGCAAA
CAGCAAGCACATCAAGGATGGCACCAAGATCAGATCATATCTTCGAGGTT
GGGGAAACCAAGTTTTTATGGACACCATCTTTGCTGGCCCAGAAGGTTGG
CTTGTCGTCTCCGACATCGACGATACAATCAAGTACACCAAAACTTCGGA
GTCCACTGGCATCCTTCGCACCACGTTCGTCGAAGACCCTAAACCCATTG
CCGGAATGCCTCAGCTCTACGCCCATATCCAGAACCAGCTTGTACCGGCA
TGGTTCTATGTCTCAGCTTCCCCATATAATTTATACCCATTTTTACACGG
GTCCTTGGTGCATACTTCAGTCCTGGCACGATGATCCTTCGAGACTCATC
CTGGCTGGATATCAGCGAGCTAGTGAAGTCCTTCACCGTTAACACACGGG
AGTACAAGGTGGACCGCGGGGAGAAAATCTATGGTTGGTTTCCCAAGCGC
CAAGTGCTCTGTATCGGAGACTCCACCCAACAAGATCCGGAAGCCTACGC
AGAACTTTATAAGAGGCATCCGCATTGGATTCAAGCGATTTGGATCAGAA
AGGTCACCGACGTGCCTCACTTGGACGAACAGAACTCCCCAGAGAGATTC
AAAACTGCGTTCGCGGGTATTCCAGAGCAAGTGTGGAGGGTGTTCGAACA
ACCAGCGGAAGTGCATCATCTGGTGGCTGAACTCAAGTCAAGCAGTCGAC
AGGCACAATCCCCAAAACAAGGCCTGGTCAACCCAAAGAATCTTCCGCCA
CCACCAAAAGAGTTCGTGATGAGCTCAATATCGCCTGATCAGTCGATCTA
TTGA
back to top

Coding sequence (CDS) from alignment at ch8:1322523..1323826-

>KJC3_011689-T1 ID=KJC3_011689-T1|Name=KJC3_011689-T1|organism=Aspergillus niger KJC3|type=CDS|length=2472bp|location=Sequence derived from alignment at ch8:1322523..1323826- (Aspergillus niger KJC3)
TCCTGGCACGATGATCCTTCGAGACTCATCCTGGCTGGATATCAGCGAGC
TAGTGAAGTCCTTCACCGTTAACACACGGGAGTACAAGGTGGACCGCGGG
GAGAAAATCTATGGTTGGTTTCCCAAGCGCCAAGTGCTCTGTATCGGAGA
CTCCACCCAACAAGATCCGGAAGCCTACGCAGAACTTTATAAGAGGCATC
CGCATTGGATTCAAGCGATTTGGATCAGAAAGGTCACCGACGTGCCTCAC
TTGGACGAACAGAACTCCCCAGAGAGATTCAAAACTGCGTTCGCGGGTAT
TCCAGAGCAAGTGTGGAGGGTGTTCGAACAACCAGCGGAAGTGCATCATC
TGGTGGCTGAACTCAAGTCAAGCAGTCGACAGGCACAATCCCCAAAACAA
GGCCTGGTCAACCCAAAGAATCTTCCGCCACCACCAAAAGAGTTCGTGAT
GAGCTCAATATCGCCTGATCAGTCGATCTATTGAATGTCTTCTGATACAA
ACCTCAAAGATCCTACCGTCCTCCATAAGGTCGCGCGGGTAGTCCATGCG
TGGAAGCGAGAGTCAAGCATGCTCCAAATGGTCACATCATTCATCTCAAA
GCCCCAATCGATTCAAGCGGCAGACGCGCGTCAGCATACCGTATGGTTGT
TCGATAACACTGCCTATCAACTACCGGCGGCCACAACATCAAAACAGGTA
TCATGGCGCGCAGAAGTCGTGGCCTGCGCTTTCCGCAAGAATAGCCGAAG
GGATATCACCAAGCTCGTCGCCATGATTGCAGATCTCATTGGACTGGACG
GAGAGATGGGAACGGACAAGGAGACACGCCATCGGATAACAGAACGGCTA
CAGCCATTCCTGTTTCATACTGCCTCTGCACACCTAATGACGCTAGAAAC
CCCTTTGCCGAACAGCACCATCCAGATGCAGAAGATCGGGCCCACAGATG
ACAATGGCATTAGTAGTCAGACAATCAGCGCAAACAGCAAGCACATCAAG
GATGGCACCAAGATCAGATCATATCTTCGAGGTTGGGGAAACCAAGTTTT
TATGGACACCATCTTTGCTGGCCCAGAAGGTTGGCTTGTCGTCTCCGACA
TCGACGATACAATCAAGTACACCAAAACTTCGGAGTCCACTGGCATCCTT
CGCACCACGTTCGTCGAAGACCCTAAACCCATTGCCGGAATGCCTCAGCT
CTACGCCCATATCCAGAACCAGCTTGTACCGGCATGTCCTGGCACGATGA
TCCTTCGAGACTCATCCTGGCTGGATATCAGCGAGCTAGTGAAGTCCTTC
ACCGTTAACACACGGGAGTACAAGGTGGACCGCGGGGAGAAAATCTATGG
TTGGTTTCCCAAGCGCCAAGTGCTCTGTATCGGAGACTCCACCCAACAAG
ATCCGGAAGCCTACGCAGAACTTTATAAGAGGCATCCGCATTGGATTCAA
GCGATTTGGATCAGAAAGGTCACCGACGTGCCTCACTTGGACGAACAGAA
CTCCCCAGAGAGATTCAAAACTGCGTTCGCGGGTATTCCAGAGCAAGTGT
GGAGGGTGTTCGAACAACCAGCGGAAGTGCATCATCTGGTGGCTGAACTC
AAGTCAAGCAGTCGACAGGCACAATCCCCAAAACAAGGCCTGGTCAACCC
AAAGAATCTTCCGCCACCACCAAAAGAGTTCGTGATGAGCTCAATATCGC
CTGATCAGTCGATCTATTGAATGTCTTCTGATACAAACCTCAAAGATCCT
ACCGTCCTCCATAAGGTCGCGCGGGTAGTCCATGCGTGGAAGCGAGAGTC
AAGCATGCTCCAAATGGTCACATCATTCATCTCAAAGCCCCAATCGATTC
AAGCGGCAGACGCGCGTCAGCATACCGTATGGTTGTTCGATAACACTGCC
TATCAACTACCGGCGGCCACAACATCAAAACAGGTATCATGGCGCGCAGA
AGTCGTGGCCTGCGCTTTCCGCAAGAATAGCCGAAGGGATATCACCAAGC
TCGTCGCCATGATTGCAGATCTCATTGGACTGGACGGAGAGATGGGAACG
GACAAGGAGACACGCCATCGGATAACAGAACGGCTACAGCCATTCCTGTT
TCATACTGCCTCTGCACACCTAATGACGCTAGAAACCCCTTTGCCGAACA
GCACCATCCAGATGCAGAAGATCGGGCCCACAGATGACAATGGCATTAGT
AGTCAGACAATCAGCGCAAACAGCAAGCACATCAAGGATGGCACCAAGAT
CAGATCATATCTTCGAGGTTGGGGAAACCAAGTTTTTATGGACACCATCT
TTGCTGGCCCAGAAGGTTGGCTTGTCGTCTCCGACATCGACGATACAATC
AAGTACACCAAAACTTCGGAGTCCACTGGCATCCTTCGCACCACGTTCGT
CGAAGACCCTAAACCCATTGCCGGAATGCCTCAGCTCTACGCCCATATCC
AGAACCAGCTTGTACCGGCATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011689KJC3_011689Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011689-T1KJC3_011689-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011689-T1.cdsKJC3_011689-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011689-T1.exon2KJC3_011689-T1.exon2Aspergillus niger KJC3exon
KJC3_011689-T1.exon1KJC3_011689-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR019236
DBxrefPFAM:PF09949
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1322523..1323826 -
Powered by Drupal