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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1375265..1379152+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011708-T1 ID=KJC3_011708-T1|Name=KJC3_011708-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3888bp|location=Sequence derived from alignment at ch8:1375265..1379152+ (Aspergillus niger KJC3)
CACTTGCTTATCTTCTGCTTGCTTTTGTTGTTCTCCGAAACCAGAGACGG
AGAGTAGTCAAGACACTCCCGGCTCACACACAACTCTCTATCCGCCGGCC
CAATGCGTCGTGCGGCTTTTCAGGCCCTTCGTACTGCCCGTCGCGTGCCA
GCATGGAAGGTCACTGGTAGGAAACCGTGCGCCGTGTCCTTCTCTAGCAG
TCGGAGTCTCGGTCTACGTGCTTCCTCCACGGGCAAACACCCCTCTTATC
TCTCCGCCCCCCTACAGTCGTCGATGCATCTTCGGAACTTCTCGCTCGCT
GTCATTTCGACCGTCGTCGCTTCGGGCGCCTGGTACGCTTATCAGGGCAC
CGGCCAGACATCGGCGGGTCTGAACCCAACATCGTCGCAATTCCGTTCGT
ATTCGACCGCTGGTGCGCAAGCTGAAGCCCCTGCGGAGGCCACTCGACGT
GCGCTGCTGGTGGATAATGACCAGTTTTTTACCGCCCCTATTTCTGGAGA
TCAGCCTTTATCCAAGCACACGGACGATTCCGACCGTCGAGTTCTCGAGA
TGTTGACCCCGGAGCAGGCCACACAGAAGCTCAGGAAGAACGAAGAGTCA
TATTTGGTGAACCGGGGCAAGGGAGTGGTCCGTTATGATATTGTTCAGGT
GCCTAGTAATTCTCCGATCGAGGATGATCATGCCGAAAAGATCATTGAGG
TGCCGTCGTCCGTAGCGGCAGCCAATCAAGGCGAATCCAAGAGTGATTGG
ATGTTCTGGGCGGTGTTTGATGGCCATTCGTACGTCTACAGAATTCCATA
CGATCAAGCATCTTCCCCTTACTAACTTATGGTTTTTCAGAGGCTGGACA
ACATCTGCCAAATTGCGCAATGTTCTCATCTCCTACGTCGCTCGTGAATT
GAACACTACCTACAAAGCCGCAGCTGCAGACCCCTCTCTGTTGACGCCCT
CGTCCGCTGCCATAGACGCCGCGATCAAGCAAGGGTTCACTCGTTTGGAC
GACGATATCGTGCACAGCAGTGTCGACAAGGTGCTCAAGTCCAACTCCCG
CCGGGTCGCAGCCGAGATGCTTGCGCCTGCTCTTTCCGGATCTTGCGCTC
TTCTTGCTTTCTACGACTCTCAATCTAAGGATTTGAAGGTCGCCTGCGCA
GGTGACTCCAGAGCTGTTCTGGGTCGTCGCGCTGCGAACGGTAAATGGTC
GGCAACACCTCTTTCCGAAGACCAGACTGGTGGAACTCCGTCGGAGATGA
AGCGTCTACGGGAGGAGCATCCCGGGGAGCCCAACGTTGTGCGCAACGGA
CGGATTCTCGGACAGCTTGAGCCGAGTCGCTCTTTTGGAGATGCTTTCTA
CAAGTGGAGCAGGGATACGCAGGACAAGATCAAGCGACAGTTCTTTGGTC
GCACTCCCCATCCCCTGTTGAAGACCCCTCCCTACGTGACTGCCGAGCCA
ATCATCACCACCACAAAGATGGACCCCGGCAGCGGTGACTTCCTCGTCCT
CGCAACCGACGGTCTCTGGGAGATGTTGAGCAACGAGGAAGTTGTCGGTC
TTGTTGGCCAGTGGGTTGAGCAGCAGCAGCAATTCGGCACCAGTGGCAGC
AACAAGGCCTGGCTGAAGAGCTGGTTTAGCTTTGGCAACAAGTCAGAGCT
GCCCGTGGAAGGGCCCAAGGAGACCGACGCTGAAGGCCAACGCCGTCCCA
TTCGCCAGCAGCAATACGACATTGCTGGAGCAGCCAGCCGGTTCACTGTT
GAGGATCAAAACGCTGCGACTCACCTTGTGCGCAATGCCATGGGAGGAAA
GGACAAGGAAATGGTCTCCGCCTTGCTCACACTTCCCAGTCCTTATTCTC
GCAGATACCGGTATGCTTCCTTCCCTACTTTATCTTTTCTAGGATCCCGC
TAACTTCACCCAGTGACGACGTAACTGTCGAGGTTATCTTCTTCGGCGAG
GGCCCTGACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCATCCGA
GGAGAGCGTCAAGGCCAAGCTGTAGTTGTAAACCCATAACTTTTTACCAT
AAGACATTATTATGACTGGTGCTAAAGAGCCATAAAAAGAGAGATGCAAG
AAAACATGCTTGATTGTCGATTTCCATTTCTTATCCTTTGTCTTTGATGC
CCGTTCGTGATACATGCATACACAGTTGACGGCATCCACTGTCTTTTATG
ATTTTCTTTCACCCAGACTAAATGAACTGGCAGTACAGCCGGCGTTACGC
GTGCGGAGCCTGGTGGGGAATATTATCTTGCTTTTAGTATGCATTAATTA
GCTAGCATGGAATAAGATACACATGACATAGAATGTTACATTCGTGCAAC
TCGTGCTCTTTTACAAATGGAACTGATGCTATTCCTGGGGTATCGAGATT
CGAATAATAATACAGAGCGGCATATGTCCGCCATGCCATAAATTGCGCTG
AGATTGTCAAGCTTCCTCAGTGCTCGAACACCCGGTCTCCGGTCCGTCAG
GCCAGGCCGTGACTCAATGGGTTCAGTTATGGACGAGCATGTATGAGACG
ATTGCACCCGGGTATATTCTCATGAAAGAAACCGCGACGCATATCCTTGC
CCTGAGCGAGTGATAGATGTGTTGTCCCTCAGTGAGACTATCTCAGACGC
ATTTCAGTACTCGTGACTGAGCAGGGCCTGTCTCGCATCTTGACTCGGTC
GGCTATAGCCTGATATTACATACTCCGACGTGTCCGCAATCCATGTCCAT
AGTCTCATTTCATGTCTTCTTATGCGGAGGCGCCAGGCGGTTTGGTGCTT
TGTACATGACATAGTGTCTCTTCCAAACAGGTAGGGGCTTAACCGGGAAA
AGCACCCGATCCAGGAGTAAGGTCTGTAACGTGGCGATGTTCGTACTGCT
GAGCCAGTAGATCATCAATGCAGTAGGCATCTCCGACACATAGGATGACA
ATCCCACATTCAACGCCAGCACCTGAATGAACATCCGGATTCCCCGCAAG
GAAAGCTGCTTGTACATCTCTATCTTGGGCAGATCCGCCAAGTTCTTCAA
AGGCTGGGCCTTCCAACCCATTCGGATATTCAGCAGGATAGAGAGTGTTA
GCGCCAAGGGCAGAATACCGGTAGGATCTCCGGCCAGGAGATCAGGGAAC
CAAAGAGCACCCTCATTGGCGAGTGAGGGCTCGACCGCCAGATGCAGGGC
AGACGAGGGATCCGCAGACTCGGGCTCAAGGCGCGATAGGAGCCAGGGCA
CTAGACCACGGTCATTGCCGGACATGGCGCGGAGACTCTCCATGATGGAG
ATCCATATGGGTAATTGGAGGAAGTTCAGCGGTTTCCAGAACCGGGGAAT
GCCCAGGCGACGGTGTACGATTCGTTTCCTTTCCAGGAATTGCTTCATGA
GCTGTTGCTTTTGGGCCCTTGTAGGGCCAATTTTGGCGAGCAACAGGCGG
TCTTCGCGGGTGTATTCGTCTGACTTCTGCAATTTCTCTTTGAAACACCT
GTTCCATGCTTGGAGGAGCGGTATCGCATCCCGTTCTCGTCTCGCTTGCA
TCTTGCTGTAGAGTTGCAGCGGCAGCGCAATGGATGTTCGGACGATCAGA
GCGCTCAATGGGATGGAGACGGCCCATGATAGACCGGAAATGGCGTGGAC
ATTGTGAAGAAAGGCGGAGGAGAGTTCGAGGGCTTCGTTGATGAAGGGAG
TTGGGCGTGTTGGATGGAAATGCCGGACCTGCTGGAAAGCCGCCGTCTTG
CGTGCGGGATGCGACAATCGGAAGGGCCGCATGTTAAGCAATTGGCTGGG
TGGCTGGAGGTACGGACTAGAAAAAATAGGATATGTACAAGAATGAAATG
ATGTATTTATGAATTAAGAGACAATGCCTCACCAACAC back to topCoding sequence (CDS) from alignment at ch8:1375265..1379152+ >KJC3_011708-T1 ID=KJC3_011708-T1|Name=KJC3_011708-T1|organism=Aspergillus niger KJC3|type=CDS|length=5427bp|location=Sequence derived from alignment at ch8:1375265..1379152+ (Aspergillus niger KJC3)
ATGCGTCGTGCGGCTTTTCAGGCCCTTCGTACTGCCCGTCGCGTGCCAGC
ATGGAAGGTCACTGGTAGGAAACCGTGCGCCGTGTCCTTCTCTAGCAGTC
GGAGTCTCGGTCTACGTGCTTCCTCCACGGGCAAACACCCCTCTTATCTC
TCCGCCCCCCTACAGTCGTCGATGCATCTTCGGAACTTCTCGCTCGCTGT
CATTTCGACCGTCGTCGCTTCGGGCGCCTGGTACGCTTATCAGGGCACCG
GCCAGACATCGGCGGGTCTGAACCCAACATCGTCGCAATTCCGTTCGTAT
TCGACCGCTGGTGCGCAAGCTGAAGCCCCTGCGGAGGCCACTCGACGTGC
GCTGCTGGTGGATAATGACCAGTTTTTTACCGCCCCTATTTCTGGAGATC
AGCCTTTATCCAAGCACACGGACGATTCCGACCGTCGAGTTCTCGAGATG
TTGACCCCGGAGCAGGCCACACAGAAGCTCAGGAAGAACGAAGAGTCATA
TTTGGTGAACCGGGGCAAGGGAGTGGTCCGTTATGATATTGTTCAGGTGC
CTAGTAATTCTCCGATCGAGGATGATCATGCCGAAAAGATCATTGAGGTG
CCGTCGTCCGTAGCGGCAGCCAATCAAGGCGAATCCAAGAGTGATTGGAT
GTTCTGGGCGGTGTTTGATGGCCATTCAGGCTGGACAACATCTGCCAAAT
TGCGCAATGTTCTCATCTCCTACGTCGCTCGTGAATTGAACACTACCTAC
AAAGCCGCAGCTGCAGACCCCTCTCTGTTGACGCCCTCGTCCGCTGCCAT
AGACGCCGCGATCAAGCAAGGGTTCACTCGTTTGGACGACGATATCGTGC
ACAGCAGTGTCGACAAGGTGCTCAAGTCCAACTCCCGCCGGGTCGCAGCC
GAGATGCTTGCGCCTGCTCTTTCCGGATCTTGCGCTCTTCTTGCTTTCTA
CGACTCTCAATCTAAGGATTTGAAGGTCGCCTGCGCAGGTGACTCCAGAG
CTGTTCTGGGTCGTCGCGCTGCGAACGGTAAATGGTCGGCAACACCTCTT
TCCGAAGACCAGACTGGTGGAACTCCGTCGGAGATGAAGCGTCTACGGGA
GGAGCATCCCGGGGAGCCCAACGTTGTGCGCAACGGACGGATTCTCGGAC
AGCTTGAGCCGAGTCGCTCTTTTGGAGATGCTTTCTACAAGTGGAGCAGG
GATACGCAGGACAAGATCAAGCGACAGTTCTTTGGTCGCACTCCCCATCC
CCTGTTGAAGACCCCTCCCTACGTGACTGCCGAGCCAATCATCACCACCA
CAAAGATGGACCCCGGCAGCGGTGACTTCCTCGTCCTCGCAACCGACGGT
CTCTGGGAGATGTTGAGCAACGAGGAAGTTGTCGGTCTTGTTGGCCAGTG
GGTTGAGCAGCAGCAGCAATTCGGCACCAGTGGCAGCAACAAGGCCTGGC
TGAAGAGCTGGTTTAGCTTTGGCAACAAGTCAGAGCTGCCCGTGGAAGGG
CCCAAGGAGACCGACGCTGAAGGCCAACGCCGTCCCATTCGCCAGCAGCA
ATACGACATTGCTGGAGCAGCCAGCCGGTTCACTGTTGAGGATCAAAACG
CTGCGACTCACCTTGTGCGCAATGCCATGGGAGGAAAGGACAAGGAAATG
GTCTCCGCCTTGCTCACACTTCCCAGTCCTTATTCTCGCAGATACCGTGA
CGACGTAACTGTCGAGGTTATCTTCTTCGGCGAGGGCCCTGACAACCGCA
CCGTCACCATCAACGAAGAGGCCAGCGCATCCGAGGAGAGCGTCAAGGCC
AAGCTGTAGATGCGTCGTGCGGCTTTTCAGGCCCTTCGTACTGCCCGTCG
CGTGCCAGCATGGAAGGTCACTGGTAGGAAACCGTGCGCCGTGTCCTTCT
CTAGCAGTCGGAGTCTCGGTCTACGTGCTTCCTCCACGGGCAAACACCCC
TCTTATCTCTCCGCCCCCCTACAGTCGTCGATGCATCTTCGGAACTTCTC
GCTCGCTGTCATTTCGACCGTCGTCGCTTCGGGCGCCTGGTACGCTTATC
AGGGCACCGGCCAGACATCGGCGGGTCTGAACCCAACATCGTCGCAATTC
CGTTCGTATTCGACCGCTGGTGCGCAAGCTGAAGCCCCTGCGGAGGCCAC
TCGACGTGCGCTGCTGGTGGATAATGACCAGTTTTTTACCGCCCCTATTT
CTGGAGATCAGCCTTTATCCAAGCACACGGACGATTCCGACCGTCGAGTT
CTCGAGATGTTGACCCCGGAGCAGGCCACACAGAAGCTCAGGAAGAACGA
AGAGTCATATTTGGTGAACCGGGGCAAGGGAGTGGTCCGTTATGATATTG
TTCAGGTGCCTAGTAATTCTCCGATCGAGGATGATCATGCCGAAAAGATC
ATTGAGGTGCCGTCGTCCGTAGCGGCAGCCAATCAAGGCGAATCCAAGAG
TGATTGGATGTTCTGGGCGGTGTTTGATGGCCATTCAGGCTGGACAACAT
CTGCCAAATTGCGCAATGTTCTCATCTCCTACGTCGCTCGTGAATTGAAC
ACTACCTACAAAGCCGCAGCTGCAGACCCCTCTCTGTTGACGCCCTCGTC
CGCTGCCATAGACGCCGCGATCAAGCAAGGGTTCACTCGTTTGGACGACG
ATATCGTGCACAGCAGTGTCGACAAGGTGCTCAAGTCCAACTCCCGCCGG
GTCGCAGCCGAGATGCTTGCGCCTGCTCTTTCCGGATCTTGCGCTCTTCT
TGCTTTCTACGACTCTCAATCTAAGGATTTGAAGGTCGCCTGCGCAGGTG
ACTCCAGAGCTGTTCTGGGTCGTCGCGCTGCGAACGGTAAATGGTCGGCA
ACACCTCTTTCCGAAGACCAGACTGGTGGAACTCCGTCGGAGATGAAGCG
TCTACGGGAGGAGCATCCCGGGGAGCCCAACGTTGTGCGCAACGGACGGA
TTCTCGGACAGCTTGAGCCGAGTCGCTCTTTTGGAGATGCTTTCTACAAG
TGGAGCAGGGATACGCAGGACAAGATCAAGCGACAGTTCTTTGGTCGCAC
TCCCCATCCCCTGTTGAAGACCCCTCCCTACGTGACTGCCGAGCCAATCA
TCACCACCACAAAGATGGACCCCGGCAGCGGTGACTTCCTCGTCCTCGCA
ACCGACGGTCTCTGGGAGATGTTGAGCAACGAGGAAGTTGTCGGTCTTGT
TGGCCAGTGGGTTGAGCAGCAGCAGCAATTCGGCACCAGTGGCAGCAACA
AGGCCTGGCTGAAGAGCTGGTTTAGCTTTGGCAACAAGTCAGAGCTGCCC
GTGGAAGGGCCCAAGGAGACCGACGCTGAAGGCCAACGCCGTCCCATTCG
CCAGCAGCAATACGACATTGCTGGAGCAGCCAGCCGGTTCACTGTTGAGG
ATCAAAACGCTGCGACTCACCTTGTGCGCAATGCCATGGGAGGAAAGGAC
AAGGAAATGGTCTCCGCCTTGCTCACACTTCCCAGTCCTTATTCTCGCAG
ATACCGTGACGACGTAACTGTCGAGGTTATCTTCTTCGGCGAGGGCCCTG
ACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCATCCGAGGAGAGC
GTCAAGGCCAAGCTGTAGATGCGTCGTGCGGCTTTTCAGGCCCTTCGTAC
TGCCCGTCGCGTGCCAGCATGGAAGGTCACTGGTAGGAAACCGTGCGCCG
TGTCCTTCTCTAGCAGTCGGAGTCTCGGTCTACGTGCTTCCTCCACGGGC
AAACACCCCTCTTATCTCTCCGCCCCCCTACAGTCGTCGATGCATCTTCG
GAACTTCTCGCTCGCTGTCATTTCGACCGTCGTCGCTTCGGGCGCCTGGT
ACGCTTATCAGGGCACCGGCCAGACATCGGCGGGTCTGAACCCAACATCG
TCGCAATTCCGTTCGTATTCGACCGCTGGTGCGCAAGCTGAAGCCCCTGC
GGAGGCCACTCGACGTGCGCTGCTGGTGGATAATGACCAGTTTTTTACCG
CCCCTATTTCTGGAGATCAGCCTTTATCCAAGCACACGGACGATTCCGAC
CGTCGAGTTCTCGAGATGTTGACCCCGGAGCAGGCCACACAGAAGCTCAG
GAAGAACGAAGAGTCATATTTGGTGAACCGGGGCAAGGGAGTGGTCCGTT
ATGATATTGTTCAGGTGCCTAGTAATTCTCCGATCGAGGATGATCATGCC
GAAAAGATCATTGAGGTGCCGTCGTCCGTAGCGGCAGCCAATCAAGGCGA
ATCCAAGAGTGATTGGATGTTCTGGGCGGTGTTTGATGGCCATTCAGGCT
GGACAACATCTGCCAAATTGCGCAATGTTCTCATCTCCTACGTCGCTCGT
GAATTGAACACTACCTACAAAGCCGCAGCTGCAGACCCCTCTCTGTTGAC
GCCCTCGTCCGCTGCCATAGACGCCGCGATCAAGCAAGGGTTCACTCGTT
TGGACGACGATATCGTGCACAGCAGTGTCGACAAGGTGCTCAAGTCCAAC
TCCCGCCGGGTCGCAGCCGAGATGCTTGCGCCTGCTCTTTCCGGATCTTG
CGCTCTTCTTGCTTTCTACGACTCTCAATCTAAGGATTTGAAGGTCGCCT
GCGCAGGTGACTCCAGAGCTGTTCTGGGTCGTCGCGCTGCGAACGGTAAA
TGGTCGGCAACACCTCTTTCCGAAGACCAGACTGGTGGAACTCCGTCGGA
GATGAAGCGTCTACGGGAGGAGCATCCCGGGGAGCCCAACGTTGTGCGCA
ACGGACGGATTCTCGGACAGCTTGAGCCGAGTCGCTCTTTTGGAGATGCT
TTCTACAAGTGGAGCAGGGATACGCAGGACAAGATCAAGCGACAGTTCTT
TGGTCGCACTCCCCATCCCCTGTTGAAGACCCCTCCCTACGTGACTGCCG
AGCCAATCATCACCACCACAAAGATGGACCCCGGCAGCGGTGACTTCCTC
GTCCTCGCAACCGACGGTCTCTGGGAGATGTTGAGCAACGAGGAAGTTGT
CGGTCTTGTTGGCCAGTGGGTTGAGCAGCAGCAGCAATTCGGCACCAGTG
GCAGCAACAAGGCCTGGCTGAAGAGCTGGTTTAGCTTTGGCAACAAGTCA
GAGCTGCCCGTGGAAGGGCCCAAGGAGACCGACGCTGAAGGCCAACGCCG
TCCCATTCGCCAGCAGCAATACGACATTGCTGGAGCAGCCAGCCGGTTCA
CTGTTGAGGATCAAAACGCTGCGACTCACCTTGTGCGCAATGCCATGGGA
GGAAAGGACAAGGAAATGGTCTCCGCCTTGCTCACACTTCCCAGTCCTTA
TTCTCGCAGATACCGTGACGACGTAACTGTCGAGGTTATCTTCTTCGGCG
AGGGCCCTGACAACCGCACCGTCACCATCAACGAAGAGGCCAGCGCATCC
GAGGAGAGCGTCAAGGCCAAGCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011708-T1.utr5p1 | KJC3_011708-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011708-T1.utr3p1 | KJC3_011708-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036457 |
| DBxref | InterPro:IPR001932 |
| DBxref | PFAM:PF13672 |
| DBxref | PFAM:PF00481 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1375265..1379152 + |
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