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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1381923..1387156- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011711-T1 ID=KJC3_011711-T1|Name=KJC3_011711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5234bp|location=Sequence derived from alignment at ch8:1381923..1387156- (Aspergillus niger KJC3)
ATTGGCTTTTTGGGCTGTGATGGATGATTCAATCAATCAATCAATAATTT
CTTCAGTTATTCTTGCTTTGGACCCTTTTTAGATCAGCACTGTGCAGGTT
AACTCGGCTGCAGGCTACGTCAACCGTTTTTTTGCTCCTGGTTTCACCCT
TCGTTCATCTCAGTCTCCAGTCTCAGTGGATCCTGCAGTCTGCCTTGTCA
GATCAACACACACACCCTCACACACTACTACTCTTTCTCTCGTTCTCCAT
TGATTAACTCTTATCCATTGAGAAATAAATCCCGCACTATGCTGCTATTC
TTATCATTTTCCCGACCAGGGGGGATAGGAAAGTCTCCCCTGCTTTCTAG
GCAGCGTTCGCAAGGGGGATATCCGCATTACAACTAGACTAGAATGTGAG
TACTTGTGAGGTTGACGCTGAAAATGACCGCCAGTGAAGCGAATTGCAGC
GTCATTTTCACGCCATGTTTCAAGTGACTTGTTGCTGCTCCAATGATTTC
AATGTCTCACCCTCTCTTTCTTTTCAGTCGGAGATTCTGTACCTTATTTC
GTAGGGGCAGTTTGCCTATTTAGTAGTCTAAACTATTATTGTCAAGTCTT
TAAGAGTTATTGATACAATCGCTTGCTCTTACTATTGACTAACTGCACTT
CATGCTCAGCTACTCATAAATAGGACAAGTAATGTGCGAATGCATTACTG
TAATGCATGTAATGTTAATTCAAAACACCACAACTACTGTCCGGATCTTG
AGCACAAGAACTGATGAAATCTACATTAAGGAAAGCTTGTCAGCCCAGTC
AGACTCCTCCCTGCGCTCAAGCGTATGTAAACAACATAAACAGGGTAGGT
CTGCGTCGCGCGCATAGAGCGCTCTCGGTCCTTTCTTTCTTGAATCGCAT
CGAGTGCTGCGGGCTGAAGGACGTCTTGCACTAGCTGAGTCACTTCACCA
CTGCTTGTCTGATTTCGCAGCTTACGGATTCGTGTCTCAACGTCGTCGAG
GAAGCTGTCGGCAGACTCGCCATCTCCAACGTGAAGTGTAACTGTGCCGA
TCTGTTCGCGCGCCTGCTCTCTGGCTCCGCGGTAGCGAAAGTTAGTAGAT
GGGGTTGTGAGGCCGAAGCGTTGGATGGTGCCGTCCTCGGGTAGGAGATG
AAGAACATGGATTGTGGCACCAAAGTTGCCAACAACAAGGAGCACGGAAG
GATTGGTGGGTGGGGTGAATATGTTTGTAAGACGGGCAAGCATGATTATG
TGAGTTGAAGATTGTTTGATGAACAGATATTAAGTCTTAGTAGTAGTAGT
ACTAGAAGTAGTAGATTAAGTGACTATAATGAAAACAGTAGAACTAACTG
GGAGAGGGAATTCACAAGACCTTGTTTTACTACAAATAAACTGATAAATA
GACCTTTCAGCATCAGTAGAAACTTAAAATGAAAGCCAGCAAATTGACAG
GTCATTTAGTATTGTGATTTGTTCTGGACAGGCAGACTGTCTGGCCTGAG
GAATACTTGCTTTGCACGTGCCCCGGGAATCAGGCATTGGGAATCTGGAC
GAGTTTCTGCCTTGAGCTTCCTTCTTGGACCGTCAGCTTCATCATCTTTT
TCGAGTTTCGATCTTCTTTCCTGGTTTCACCCTTGTCTGTGTGTGAGAGA
GTGAGTGTCTGATCGAATCTGCATCTATCTCTCTCGTCCCTGGTTAGCGG
CTGAGGATCGTCCTCTCCCGGCATCTTCCCCGGCGCTTGTTGGCGCCTGA
GAATGTGTGCAACGACTTTCCCCCTCCAGACCGACTGCGCGCCACGAGGC
TGAATCGCAAGGCTCTCTTACTCTCACTCACTCAACTCTCCCTCTCCCTC
TTCCCACAACCACACCCCCCCTTTCCCTCATTTGCCTCCTTCCACCCCCC
CCCTCTGATCGCTCGTGTCCGCCTTTCTGCACGCGAATACTCCATTGCTG
TGCCGTGCTGGTTGTGAATCGCCCGCCGCCGTCATCCACTAACTCGTGCC
CGATTCCTTCCTCTACCTCCCCCTCCTGGCCCTCCTCCACGCCCACATCC
CTCCCTGCGGCACTTCTGACTCGCCCTTCCCCGCGTTTCTTCAGCTTCTT
CGTTGGGTGTGAGATTGGACCGGACCTTGCGTTTCAACTCGACTAAGCCT
TGCATCGCGTGGTATCTATTTTTGGTTTATCCTCTCGTCATGGCATCCCA
GGACAACCTGCCCGACTCGGGGCAGTCGCCCGCTGGGATGAGGAGCCGCA
GTATCAGTCCATATAATGATCCCTCCGCCGGATTGACCTTGGATGTCTCC
GTCGCAACCACTACAGCTCCTTATACCTCTACTTCCTACAACCCCTCCAA
TCCAGGCGCCTCTGATTCCTACGGCTATAACCCCACCGGTTATCTCTCCG
CACCCTCCGCCGCGCAGACGTTGGCCCCGACCGATCAAACATACTCGCAC
AGCCTTCAACTACCACAATCCTTCGATGCTGGGTTGATGCCCCAGCTGGA
CCAGTCGACGGGCCTGTCCTTGCAGCAGCAACAGCAGCAGCAGCAACAAC
AACAACAGGCGTCAGACGAGAACTTCTCTAATCTGTTGAACTCAAACCCC
ACAGATTTCGACTTTGCCCTATACCAGAACCCTAGTCCGAATAGCACGGC
CGCCCCGGACTACGACTCCCCGCTCTTGCTAGATCCCCAAGTTCACAGCC
ATTCCCGACCGGGCAGTCAAGCGGTTAATCCTGCCGACCTCGTCAGCCAG
ATACCCTCTCCTCATCCCTCGGCTTCTCCGCAATTGTCCCCGATCTCTCC
CCAGGACCATTATCAGCACTCATCTCCCGGACCCATGTCGCCGCCCAGCT
CGACGCCGGGGACTTACTACACCCCCCAACATTCCCGCCATACTTCCTTG
GATCCTGCTAGCGCCGCATACATGTCGGGCAATGTGCATACGGATTGGCA
GGCAGTCATGGCCAACTCTGCCTTCCAGGGCCATCGACGGGCCCCGTCTG
AGGTGTCTGAGGTGTCATCCGCTGCCCCATCTCCATACATGTCTCAGCAT
GAATCTTTTGATGGCGTGGAGAACAACCCGTCCCCCCTCCTAGCACCCCA
GCATGACCCCGGTCTTTACGACAATGCACTAGGCATTGAATCTTTCACTT
TGTCGGATGGTCAGCAACAGCACCATCCACAGGGCATCAGCCCTGCTCAC
AGTCCATATATCTCCCCGCAGTTGATGCCTCAACAGCCCACAGACATGAT
TCCCAACGTGCCGTACATCTCTGCTCCTGCGGGCAACACGCAGTACCCCA
CCCCACCGACCGACATGTACGGGGAGGGTATGATGGTCCAAGGAAACGCT
GGCATGGGTGATATAGGTCAAGCATCGCAAATGGCGCCCCCATCTATCAA
CGTGGAATTCGCGCCCCCGGCGAAGAATCTCAACCTCCCGCAGACGAAGC
CCAGTGCGGATTTGGACTCGTTGAGTCCACCCGTTGCCATGCGTAAGTTG
TCACTGCTCGCCCTATTCTTTGCATTTTCTCGTACAATGTTAACTGCGAG
CTTATAGGCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGC
TTCTCGCGCACGGTCATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGC
CTCCGTCACCCCGGTCGCTGTCGCCCTTTGATACCATGGGGCGACAGCCA
CATAGTAATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCG
ACTGTCTACGTCGTCGATCGACAGTAGAAATTACATTCTCGGCCTTGCGG
ATCCCCAGAGGCCTGGGGGCAACCCTAACGACTCCAAACGTGTCCAGAAA
CACCCGGCCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGC
CTACAACCTGCGATCCCATTTGCGTACGCACACCGATGAACGGCCGTTCG
TATGTACTGTCTGCGGGAAAGCCTTTGCGCGACAGCATGATCGGAAGCGG
CACGAGGGGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCT
CTCCCGGGGTGGACAGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATG
CTCTGGGTCGTCATTTCCGTTCCGAAGCTGGTCGGATCTGTATCAAGCCG
TTGTTGGATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCA
ACAGCACTTACAGCCTATACCACCTCCGTTGATGGTGCCAGGAATGGATG
GCCAACATACCAGCAATTTCGTTCTTCCTGCCGCGTTGCTGGCCCAATAC
CCCGCGCTGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGA
TCCCAGTGATTTAGGAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAG
AGTTTGGGTTTGATGAAGACGAATCTGGCCTCAGTAGTGTCTCTGGCATA
AGCGGAAGCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGG
CCAAATGTTAGGAGTAAACCCTGCAGAATCTGGCTATCGAGAAACGGATT
GGAGAGCATGACAACGCTTGTCTCGGTGATGCTCGCCTGCCTTCCCATAT
TTTTTCTTCATTCTTAGCTTGGGTGCTATATCCCCTTTCGCCCCAGTTTT
CTTTTCTTCTTTTCTTTCCCCATCTTGATCATTAAACAGGCGATATTTCT
TTCCATTCTACCCGAAATTTGAGGCAACGGGTGCAGCAGGCTTCCTCATG
ATTTCGATTTCTCAATAGAACAGGGTTTTGGCGTTGAGATACAGGGAGAC
GGATTGGATTGGTGATTGATTGATTGCCTCATGACGGCGGGTTTCACTTT
CGTTCAGTCCTACCACTTCCTATTTTTATTTCTATTACTGCTTTTCTTTC
ATTCTCAGCTGGTCTAACCCGACCACGCATTATTTTTTTCTTATCTTGTT
ACGTGATTACGAAGAATCCTTGAACTTCATACCCATGGAAGATGCTCCCG
GTTGTGTTTTCGTGTGCGAGGTTTAGGTACTTTTCTATTTTCTATTTTCT
GTTACCCAAGGAAAAGGGATATCCATTTGAATACGCATATTTTAAATTAT
TTCGTTCCACCACATTTATTGTCCTACTCAGTGTGAGAGGTGTCTTGTTA
AGCTCATGTAATTGACTGGGGTGCGGTAGTCCTTTCTGCGAAGTATACGC
TACCATAATTAACAGAATAAGTTTCAGTCCTATG back to topCoding sequence (CDS) from alignment at ch8:1381923..1387156- >KJC3_011711-T1 ID=KJC3_011711-T1|Name=KJC3_011711-T1|organism=Aspergillus niger KJC3|type=CDS|length=4614bp|location=Sequence derived from alignment at ch8:1381923..1387156- (Aspergillus niger KJC3)
GCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGCTTCTCGC
GCACGGTCATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGCCTCCGTC
ACCCCGGTCGCTGTCGCCCTTTGATACCATGGGGCGACAGCCACATAGTA
ATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCGACTGTCT
ACGTCGTCGATCGACAGTAGAAATTACATTCTCGGCCTTGCGGATCCCCA
GAGGCCTGGGGGCAACCCTAACGACTCCAAACGTGTCCAGAAACACCCGG
CCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGCCTACAAC
CTGCGATCCCATTTGCGTACGCACACCGATGAACGGCCGTTCGTATGTAC
TGTCTGCGGGAAAGCCTTTGCGCGACAGCATGATCGGAAGCGGCACGAGG
GGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCTCTCCCGG
GGTGGACAGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATGCTCTGGG
TCGTCATTTCCGTTCCGAAGCTGGTCGGATCTGTATCAAGCCGTTGTTGG
ATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCAACAGCAC
TTACAGCCTATACCACCTCCGTTGATGGTGCCAGGAATGGATGGCCAACA
TACCAGCAATTTCGTTCTTCCTGCCGCGTTGCTGGCCCAATACCCCGCGC
TGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGATCCCAGT
GATTTAGGAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAGAGTTTGG
GTTTGATGAAGACGAATCTGGCCTCAGTAGTGTCTCTGGCATAAGCGGAA
GCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGGCCAAATG
TTAGGAGTAAACCCTGCAGAATCTGGCTATCGAGAAACGGATTGGAGAGC
ATGAATGGCATCCCAGGACAACCTGCCCGACTCGGGGCAGTCGCCCGCTG
GGATGAGGAGCCGCAGTATCAGTCCATATAATGATCCCTCCGCCGGATTG
ACCTTGGATGTCTCCGTCGCAACCACTACAGCTCCTTATACCTCTACTTC
CTACAACCCCTCCAATCCAGGCGCCTCTGATTCCTACGGCTATAACCCCA
CCGGTTATCTCTCCGCACCCTCCGCCGCGCAGACGTTGGCCCCGACCGAT
CAAACATACTCGCACAGCCTTCAACTACCACAATCCTTCGATGCTGGGTT
GATGCCCCAGCTGGACCAGTCGACGGGCCTGTCCTTGCAGCAGCAACAGC
AGCAGCAGCAACAACAACAACAGGCGTCAGACGAGAACTTCTCTAATCTG
TTGAACTCAAACCCCACAGATTTCGACTTTGCCCTATACCAGAACCCTAG
TCCGAATAGCACGGCCGCCCCGGACTACGACTCCCCGCTCTTGCTAGATC
CCCAAGTTCACAGCCATTCCCGACCGGGCAGTCAAGCGGTTAATCCTGCC
GACCTCGTCAGCCAGATACCCTCTCCTCATCCCTCGGCTTCTCCGCAATT
GTCCCCGATCTCTCCCCAGGACCATTATCAGCACTCATCTCCCGGACCCA
TGTCGCCGCCCAGCTCGACGCCGGGGACTTACTACACCCCCCAACATTCC
CGCCATACTTCCTTGGATCCTGCTAGCGCCGCATACATGTCGGGCAATGT
GCATACGGATTGGCAGGCAGTCATGGCCAACTCTGCCTTCCAGGGCCATC
GACGGGCCCCGTCTGAGGTGTCTGAGGTGTCATCCGCTGCCCCATCTCCA
TACATGTCTCAGCATGAATCTTTTGATGGCGTGGAGAACAACCCGTCCCC
CCTCCTAGCACCCCAGCATGACCCCGGTCTTTACGACAATGCACTAGGCA
TTGAATCTTTCACTTTGTCGGATGGTCAGCAACAGCACCATCCACAGGGC
ATCAGCCCTGCTCACAGTCCATATATCTCCCCGCAGTTGATGCCTCAACA
GCCCACAGACATGATTCCCAACGTGCCGTACATCTCTGCTCCTGCGGGCA
ACACGCAGTACCCCACCCCACCGACCGACATGTACGGGGAGGGTATGATG
GTCCAAGGAAACGCTGGCATGGGTGATATAGGTCAAGCATCGCAAATGGC
GCCCCCATCTATCAACGTGGAATTCGCGCCCCCGGCGAAGAATCTCAACC
TCCCGCAGACGAAGCCCAGTGCGGATTTGGACTCGTTGAGTCCACCCGTT
GCCATGCGCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGC
TTCTCGCGCACGGTCATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGC
CTCCGTCACCCCGGTCGCTGTCGCCCTTTGATACCATGGGGCGACAGCCA
CATAGTAATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCG
ACTGTCTACGTCGTCGATCGACAGTAGAAATTACATTCTCGGCCTTGCGG
ATCCCCAGAGGCCTGGGGGCAACCCTAACGACTCCAAACGTGTCCAGAAA
CACCCGGCCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGC
CTACAACCTGCGATCCCATTTGCGTACGCACACCGATGAACGGCCGTTCG
TATGTACTGTCTGCGGGAAAGCCTTTGCGCGACAGCATGATCGGAAGCGG
CACGAGGGGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCT
CTCCCGGGGTGGACAGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATG
CTCTGGGTCGTCATTTCCGTTCCGAAGCTGGTCGGATCTGTATCAAGCCG
TTGTTGGATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCA
ACAGCACTTACAGCCTATACCACCTCCGTTGATGGTGCCAGGAATGGATG
GCCAACATACCAGCAATTTCGTTCTTCCTGCCGCGTTGCTGGCCCAATAC
CCCGCGCTGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGA
TCCCAGTGATTTAGGAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAG
AGTTTGGGTTTGATGAAGACGAATCTGGCCTCAGTAGTGTCTCTGGCATA
AGCGGAAGCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGG
CCAAATGTTAGGAGTAAACCCTGCAGAATCTGGCTATCGAGAAACGGATT
GGAGAGCATGAATGGCATCCCAGGACAACCTGCCCGACTCGGGGCAGTCG
CCCGCTGGGATGAGGAGCCGCAGTATCAGTCCATATAATGATCCCTCCGC
CGGATTGACCTTGGATGTCTCCGTCGCAACCACTACAGCTCCTTATACCT
CTACTTCCTACAACCCCTCCAATCCAGGCGCCTCTGATTCCTACGGCTAT
AACCCCACCGGTTATCTCTCCGCACCCTCCGCCGCGCAGACGTTGGCCCC
GACCGATCAAACATACTCGCACAGCCTTCAACTACCACAATCCTTCGATG
CTGGGTTGATGCCCCAGCTGGACCAGTCGACGGGCCTGTCCTTGCAGCAG
CAACAGCAGCAGCAGCAACAACAACAACAGGCGTCAGACGAGAACTTCTC
TAATCTGTTGAACTCAAACCCCACAGATTTCGACTTTGCCCTATACCAGA
ACCCTAGTCCGAATAGCACGGCCGCCCCGGACTACGACTCCCCGCTCTTG
CTAGATCCCCAAGTTCACAGCCATTCCCGACCGGGCAGTCAAGCGGTTAA
TCCTGCCGACCTCGTCAGCCAGATACCCTCTCCTCATCCCTCGGCTTCTC
CGCAATTGTCCCCGATCTCTCCCCAGGACCATTATCAGCACTCATCTCCC
GGACCCATGTCGCCGCCCAGCTCGACGCCGGGGACTTACTACACCCCCCA
ACATTCCCGCCATACTTCCTTGGATCCTGCTAGCGCCGCATACATGTCGG
GCAATGTGCATACGGATTGGCAGGCAGTCATGGCCAACTCTGCCTTCCAG
GGCCATCGACGGGCCCCGTCTGAGGTGTCTGAGGTGTCATCCGCTGCCCC
ATCTCCATACATGTCTCAGCATGAATCTTTTGATGGCGTGGAGAACAACC
CGTCCCCCCTCCTAGCACCCCAGCATGACCCCGGTCTTTACGACAATGCA
CTAGGCATTGAATCTTTCACTTTGTCGGATGGTCAGCAACAGCACCATCC
ACAGGGCATCAGCCCTGCTCACAGTCCATATATCTCCCCGCAGTTGATGC
CTCAACAGCCCACAGACATGATTCCCAACGTGCCGTACATCTCTGCTCCT
GCGGGCAACACGCAGTACCCCACCCCACCGACCGACATGTACGGGGAGGG
TATGATGGTCCAAGGAAACGCTGGCATGGGTGATATAGGTCAAGCATCGC
AAATGGCGCCCCCATCTATCAACGTGGAATTCGCGCCCCCGGCGAAGAAT
CTCAACCTCCCGCAGACGAAGCCCAGTGCGGATTTGGACTCGTTGAGTCC
ACCCGTTGCCATGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011711-T1.utr3p1 | KJC3_011711-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011711-T1.utr5p1 | KJC3_011711-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF13912 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1381923..1387156 - |
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