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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1403593..1407645+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011717-T1 ID=KJC3_011717-T1|Name=KJC3_011717-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4053bp|location=Sequence derived from alignment at ch8:1403593..1407645+ (Aspergillus niger KJC3)
TTATTCTGCATGCCATCATTCACTCCATATCGATAAGGTCAACTGGCACC
TGTCAATTGATTATCTACAATATGGAGACAAATTGCCCGACCCAACAACA
ACAACCATCATCAATCTCATCAATCAATGACCTCGTCCTCCCTCCTCTCT
TCTAACTATCTAGCAAGGATCTTGCGCTGATGCTCACGCGTCACCCGTGG
GATGCAGTGCTTTCGCCCCTCCAGGTTGCCAGTGCAACCGCCCGTGTTGA
CGGTTCAATCATCATCCCAGCCCCTCAGTAATTCCAGGCCTCCGCTTCAG
ACTGGACAAAGCTTGGGAGGGTCCGCTAGCAATGACGATGACCTTAATCA
AATCTTCTTGCCGGCCCCTCTAGAGATCATCTAGAATCGGCCCCGATCGG
CCGTAATTGAGATGCAGCCTGTTGTCGCTTTCTTTCCCCTGTCAATATTA
CTCCCTCCTCGCCTAGCTCTTCACTTCACTCTACTCCCTCTATCGTCTGT
CTCGGGATTGCTTCTTTCCTTCTGATTGCAACTACTTGGAAACAACACCT
TCAAGGAGAAACCTCGTTTGATCCAGGTCGCCTCCCCAACCGCCTCGTCT
CATGCCGGCCGGTCTGGCCTCCAGACGCGCCTTCGCTGAGTCGTGCTAAC
GAGCTAAGGATCGACGGCTGCTCTAGATGCATCACAGTCAGTCTCAGACT
GCCGCATTCTTGTTGACGCATCTCAAAGCTCTTGCTAATCCCCCATGGAT
GAATGCCTCTCGAGGAAACACGGAATGCACAGGGCTGTTGGCGCCCCTGT
GGTGCCAACGCTCCTTGTCCTCCTGCTCTTCGCCAGCCCGGCTTCCACAG
CAGTCCCATACACTCCCTCACAGCTCTTCTACTCTTCAACTAGCAATGGA
TCGTTCGCCTACCTGCTGCAATCCACCGGTACGAGTCAAGATGCCTCCAC
CGAATTTATTACCTGGGATATTTCAGGTGACATCGATACAACAAGCCCGA
GTTACAATATCCTGATGGACCCATTGCCCTTTCAACTCGACTCTCAGTCG
CCTGCCTTTGTGCCTGTTATCGACCAGCATGGAGTGATCAAGATGTATGT
AGGCGATTGCCAGAAAGCCCTGGATCAGGGTGAGCTGTGGCAGTTTACGC
CGGACAACAACAGCTCGATTGGAGATGGGGCATGGGAGAAGCTCTCTGTG
AAGGAAAGCGAGTCAAGCGACAGCGTGGATGCACCGAACTATCTCTCAGC
AGGGTTCGCATATGCCTCCACCAATACCTCTGACAGCTCCGTCTACGCTT
TTGGCGGGATGTGCCCTTTCTCGAATGCCTCAGAAACGAATTGGATGGGT
GGCGCCAACTACTCCCAGTCCATGGTGGTCCTTGAGCCATCCGGATCCCG
CAGGACCGATGCTTATGATGCATCCACCACCGGCAATCGCGCACCCCCGA
TTGCAGAGGCCGGCTTTACCGTGACTCCGCTGCAAGCAACTTATGCATAT
TCATCGAGCGGCGAGGTGCGCCAGCAACAGGACTTTCTCCTGATCGGTGG
CCAAACCCAGGATGCATTCATCAATATGTCGCAGCTTGCGGTGTTTTCTC
TACCCCAGAATAGCTGGAGCTTCGTGACAGTTGATATTACTTCTGCCTCC
TACAAGACTGAGCTTGCTGTGAGGGATGTTGCCACGGTAGAGCCGAGATC
GGGGCATACGGCAGTTCTTTCCCCGGATGGCAGCAAGGTCATCGTGTACG
GAGGCTGGGTGGGGAACACGAGCATTGCTGCTCAACCGCAGCTAGTCATA
CTGGAACTAGGAGAAACCTATGGAGGCGCCGGTGATTGGACTTGGAGGGT
ACTCTCAACTGGGGATACGGAGACCACAGGAGGGAGCGGTCTTTATGGGC
ATGGGGCAGCAATGCTGCCTGGTGATGTGATGATGGTGGCAGGCGGATAT
ACTATACCACAGTCGTCGTCGTCGTCATCCTCGTCGAAGCGTTCAGCCAA
GCAATCCCAGCCCAACTCACAGGTCTATCTCTATAATATCACCTCCGAGG
AATGGGTCTCAACTTACCGAAATCCTGACTCCATTGCTAGTCAACAGGAT
TCCTCCCACTCTGGCTCATCAAAAACATGGAAAACTGGGGTAGGAGTTGG
TGTTGGACTGGGAATTCCTGTCATTGCTGGCCTCGCTATCCTCCTATTCT
TCCTTTGGAAGAGGCGTCAAAAGCGCCGCGTGCGAGATAAGGAGCTCCGC
AAGCTAGCCTTGGGGGCAGAAAGAGCCCACTTCTGGGGTCAAGGGGAGCC
TTTTATGGCGAGCAGTATCCACAAGCCCTCCATGAAGGAGACGGAAGGGA
GGAGTGACTACCCTTGGATGGGCAATAGTGGATCTGGGCGGCCATTTAGT
TGGCAGGATACAGGGGATGCAGTCGCGGAAAGCACTGGTCTGCTCGGGGA
TCCTAGTCCTACAACTACAGGTCGTTCTAGTCTGAGCGCGAGAATGTATC
GCCCCCCTACGCAATACAGCGAGTACAGAAGGAGTGATGCCACGGGTGAT
ATCCACCCGATCGATGAGCGTGAGGAAGATGAAGCGAAAGACGCCGTGGG
TGGTCCCATGCAGAAAACAATTGACAATTTCCGGGCCGAGTCAACAATAT
TGACACCCTTGAGCACGACCGTATGCGGAGACTCATATGCTGGTGGCTCG
GCCGGGCCGTCCGACTACATGGCTGGAGTTGGCTATGACAGAGACATACC
TTCTTCGTCAGATAAGGATGAACGGACATCCTCAAACCTCTCCGATTCCT
CCACGTCAGCAAAATCTATCTCTCAACCTCGCATGGCCAACTTTAGCTAC
CCGGCGAGTCAACCAAGCAGTGGGCGTCAGTCACCTCAGAAATCTGTTAC
AATTTCGATACCTAGTCGGGAGCCAGCCCGCAGCAGACCGAACAGTGCAG
CGCTTTCATTCGAAAAGCGCTACTCTTCTGACTCCTACTCTACCGCTCAG
ACCTCACTCTCCCTTCGACAAGCTGAAGGCGAGCATCTTCTCCGCGACAA
CCCTGAACCGACGTCCCCACTCGATCTATTCCCCAAACCCACCACATTCC
CCAAGCAACGCACATCTGAATGGATCGGCAACAACGTTCGCAGAGTGCTC
TCCCTAACGCGGAGACGTCCAGCAACCGACTCGGATCCGACCACAGCGCC
CCTCGCCTCTGGAATAGACCGCAGAAGTACGGTTCTCGGTCCCAACTCAA
CTGCTACAGGCTACGGCCTTCCGCGCCGCTCCGTCAGCGCATCAGCCGAA
CTCTTCAAACGCAAACAAGGAGCCAAAGACTGGGGCGCAGCCAACAGACT
CTCACGCAATATGGAATCCCAGGCGCGGTCCACACGGGATGACACCACCC
TAGGCGCATATCTAGACCTTGATCCAGACAGTGACGACGATTGGGACGTG
GAAGGTGCTGCAGAAGGCCGTCGCGTCCAGGTAACCTTCACCGTACCGAA
GGAGAAACTCCGCGTCGTCAACGCCACCGCAGGCGAACTGGACACATTCT
CCGAGAAGTCCGTCAGCAGAAGCAATAGTGATGCCGCGAAGTGAGCAGTG
CTTGCTTCCTTTTCCATTTCCCTGGGCTCTCGATTTTGCAGTCATAAGTT
TTTTTTTATCCTCCTTTGCCTCCTGTGAATCGCTTTGGGATGGGTGGTAT
GCGACGAAGTAAATTTGTTGATACATACTTTTATCCACACATACCCACAT
CCATACGTATATTATATACGAGGTTAGTACAAGGTGGGTTTTATGGTTGT
TGATTTGTTTGATATGATATGATACTCCACTCGTTACATATTCGTTGTTG
CCTTTCTATTCTGATAGTCCATGTTTTTCTCTTCGTTTCTTGTCTTCATG
CAAATGGCTGGATGGATTGGACGATGTCGATGAGGTCGTGGAACTTACGA
GCTACGAGTCGAATGGACATGAATGAATTTGAATGATACTTGAAGTTGAA
TACGTCAACTAGTTAGTTACTAGATAGTAATTACTGTCTGATAATAAGCG
AGG back to topCoding sequence (CDS) from alignment at ch8:1403593..1407645+ >KJC3_011717-T1 ID=KJC3_011717-T1|Name=KJC3_011717-T1|organism=Aspergillus niger KJC3|type=CDS|length=2850bp|location=Sequence derived from alignment at ch8:1403593..1407645+ (Aspergillus niger KJC3)
ATGGATGAATGCCTCTCGAGGAAACACGGAATGCACAGGGCTGTTGGCGC
CCCTGTGGTGCCAACGCTCCTTGTCCTCCTGCTCTTCGCCAGCCCGGCTT
CCACAGCAGTCCCATACACTCCCTCACAGCTCTTCTACTCTTCAACTAGC
AATGGATCGTTCGCCTACCTGCTGCAATCCACCGGTACGAGTCAAGATGC
CTCCACCGAATTTATTACCTGGGATATTTCAGGTGACATCGATACAACAA
GCCCGAGTTACAATATCCTGATGGACCCATTGCCCTTTCAACTCGACTCT
CAGTCGCCTGCCTTTGTGCCTGTTATCGACCAGCATGGAGTGATCAAGAT
GTATGTAGGCGATTGCCAGAAAGCCCTGGATCAGGGTGAGCTGTGGCAGT
TTACGCCGGACAACAACAGCTCGATTGGAGATGGGGCATGGGAGAAGCTC
TCTGTGAAGGAAAGCGAGTCAAGCGACAGCGTGGATGCACCGAACTATCT
CTCAGCAGGGTTCGCATATGCCTCCACCAATACCTCTGACAGCTCCGTCT
ACGCTTTTGGCGGGATGTGCCCTTTCTCGAATGCCTCAGAAACGAATTGG
ATGGGTGGCGCCAACTACTCCCAGTCCATGGTGGTCCTTGAGCCATCCGG
ATCCCGCAGGACCGATGCTTATGATGCATCCACCACCGGCAATCGCGCAC
CCCCGATTGCAGAGGCCGGCTTTACCGTGACTCCGCTGCAAGCAACTTAT
GCATATTCATCGAGCGGCGAGGTGCGCCAGCAACAGGACTTTCTCCTGAT
CGGTGGCCAAACCCAGGATGCATTCATCAATATGTCGCAGCTTGCGGTGT
TTTCTCTACCCCAGAATAGCTGGAGCTTCGTGACAGTTGATATTACTTCT
GCCTCCTACAAGACTGAGCTTGCTGTGAGGGATGTTGCCACGGTAGAGCC
GAGATCGGGGCATACGGCAGTTCTTTCCCCGGATGGCAGCAAGGTCATCG
TGTACGGAGGCTGGGTGGGGAACACGAGCATTGCTGCTCAACCGCAGCTA
GTCATACTGGAACTAGGAGAAACCTATGGAGGCGCCGGTGATTGGACTTG
GAGGGTACTCTCAACTGGGGATACGGAGACCACAGGAGGGAGCGGTCTTT
ATGGGCATGGGGCAGCAATGCTGCCTGGTGATGTGATGATGGTGGCAGGC
GGATATACTATACCACAGTCGTCGTCGTCGTCATCCTCGTCGAAGCGTTC
AGCCAAGCAATCCCAGCCCAACTCACAGGTCTATCTCTATAATATCACCT
CCGAGGAATGGGTCTCAACTTACCGAAATCCTGACTCCATTGCTAGTCAA
CAGGATTCCTCCCACTCTGGCTCATCAAAAACATGGAAAACTGGGGTAGG
AGTTGGTGTTGGACTGGGAATTCCTGTCATTGCTGGCCTCGCTATCCTCC
TATTCTTCCTTTGGAAGAGGCGTCAAAAGCGCCGCGTGCGAGATAAGGAG
CTCCGCAAGCTAGCCTTGGGGGCAGAAAGAGCCCACTTCTGGGGTCAAGG
GGAGCCTTTTATGGCGAGCAGTATCCACAAGCCCTCCATGAAGGAGACGG
AAGGGAGGAGTGACTACCCTTGGATGGGCAATAGTGGATCTGGGCGGCCA
TTTAGTTGGCAGGATACAGGGGATGCAGTCGCGGAAAGCACTGGTCTGCT
CGGGGATCCTAGTCCTACAACTACAGGTCGTTCTAGTCTGAGCGCGAGAA
TGTATCGCCCCCCTACGCAATACAGCGAGTACAGAAGGAGTGATGCCACG
GGTGATATCCACCCGATCGATGAGCGTGAGGAAGATGAAGCGAAAGACGC
CGTGGGTGGTCCCATGCAGAAAACAATTGACAATTTCCGGGCCGAGTCAA
CAATATTGACACCCTTGAGCACGACCGTATGCGGAGACTCATATGCTGGT
GGCTCGGCCGGGCCGTCCGACTACATGGCTGGAGTTGGCTATGACAGAGA
CATACCTTCTTCGTCAGATAAGGATGAACGGACATCCTCAAACCTCTCCG
ATTCCTCCACGTCAGCAAAATCTATCTCTCAACCTCGCATGGCCAACTTT
AGCTACCCGGCGAGTCAACCAAGCAGTGGGCGTCAGTCACCTCAGAAATC
TGTTACAATTTCGATACCTAGTCGGGAGCCAGCCCGCAGCAGACCGAACA
GTGCAGCGCTTTCATTCGAAAAGCGCTACTCTTCTGACTCCTACTCTACC
GCTCAGACCTCACTCTCCCTTCGACAAGCTGAAGGCGAGCATCTTCTCCG
CGACAACCCTGAACCGACGTCCCCACTCGATCTATTCCCCAAACCCACCA
CATTCCCCAAGCAACGCACATCTGAATGGATCGGCAACAACGTTCGCAGA
GTGCTCTCCCTAACGCGGAGACGTCCAGCAACCGACTCGGATCCGACCAC
AGCGCCCCTCGCCTCTGGAATAGACCGCAGAAGTACGGTTCTCGGTCCCA
ACTCAACTGCTACAGGCTACGGCCTTCCGCGCCGCTCCGTCAGCGCATCA
GCCGAACTCTTCAAACGCAAACAAGGAGCCAAAGACTGGGGCGCAGCCAA
CAGACTCTCACGCAATATGGAATCCCAGGCGCGGTCCACACGGGATGACA
CCACCCTAGGCGCATATCTAGACCTTGATCCAGACAGTGACGACGATTGG
GACGTGGAAGGTGCTGCAGAAGGCCGTCGCGTCCAGGTAACCTTCACCGT
ACCGAAGGAGAAACTCCGCGTCGTCAACGCCACCGCAGGCGAACTGGACA
CATTCTCCGAGAAGTCCGTCAGCAGAAGCAATAGTGATGCCGCGAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011717-T1.utr5p1 | KJC3_011717-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011717-T1.utr3p1 | KJC3_011717-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-35) |
| DBxref | InterPro:IPR011043 |
| DBxref | InterPro:IPR015915 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1403593..1407645 + |
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