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KJC3_011718-T1, KJC3_011718-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011718-T1
Unique NameKJC3_011718-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1407628..1409616-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011718-T1 ID=KJC3_011718-T1|Name=KJC3_011718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1989bp|location=Sequence derived from alignment at ch8:1407628..1409616- (Aspergillus niger KJC3)
CCTCTCTCCGAGACTCCATCCAGACTTCACTTTTCTTCCGTCTGCCCCTC
GCTTACTTTTCTCCTCCTCTTCCTTTCCCCTCCATTCTTCTTATTTGGTC
TCGTTCTCCCTCGATATCCTTTCTTCTTCGACTCCTCTTCCATCCATCTC
CTACAGATCCCACCTGCCCTTCTCCCTCCGAACCCTATTCATCAATTGAA
ACCGCCCGCCATGTCGACGTGGGGTGATTACTTCCGGGTCACCACGTAAG
TCTTCTGAGTCAGCCCCAGTCTATGATGATGGTGACATCGCACACCATCA
CCACCACACAGACATAAACACCTCTGTTCATATACGCCCACATACTAATC
GCATTGTTTCTCTTCTCAGTTATGGTGAATCGCACTGCCGCTCTGTCGGC
TGCATCGTCGACGGCTGCCCCCCAGGAATGGAACTCACCGAGGACGACAT
CCAGCCCCAGATGACCCGCAGACGTCCCGGTCAGAGTGCTCTGACGACGC
CTCGTAATGAGAAGGACCGCGTTGAAATCCAGTCCGGAACGGAGTTTGGA
GTTACCCTGGGAACTCCGATTGGCATGATGGTGCGCAACGAAGACCAGAG
ACCCAAGGACTACGGCAACAGCACCATGGACCTGTACCCCCGCCCCAGTC
ACGCCGACTTGACCTATCTGGAGAAGTACGGCGTCAAGGCCAGCAGCGGT
GGTGGTCGCAGTAGTGCCCGTGAGACGATTGGTGAGTGAACCGCTTATCC
CCAGATGGAGTCCCATTGACACAATTTTTCCCCGGTTTCAGGCCGTGTGG
CTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAG
ATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTAC
TCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCA
AGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCC
AACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGA
CAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCC
CCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCC
CACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGG
TTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCG
TCTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCGC
CTCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCAA
CGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTG
GCCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAA
GCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGT
CGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACT
CCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCC
ACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAAATAGGAAATGG
TTTGATTTATTCCTTTTCTTTGGGTTCGGGGTCTCCAAAATAAAATATCA
CGATTGGCTCTTTGGGGATCGGTCTACGCATGCGGGGTTTTCTATCTTTT
AGAATGCAGTGACGTACGTCATGTTCAGCTGATGTTGATGTCTCAAGTCA
GAAACTCAACTTAATGACTTTTTTCCTTCTTTTTCTGTTTCGGTATATTA
TATCACCTTACCTTTTTTTTGGATTGTGTTCGTATAGATCTCTCGGTTTG
GCTTTGTTGCTTTCAGAATCAAAATGGCGTTCGACGTTCGTACTATAACA
GATGAGTCTTGTGTTTAACAACCTCGCTTATTATCAGAC
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Coding sequence (CDS) from alignment at ch8:1407628..1409616-

>KJC3_011718-T1 ID=KJC3_011718-T1|Name=KJC3_011718-T1|organism=Aspergillus niger KJC3|type=CDS|length=3735bp|location=Sequence derived from alignment at ch8:1407628..1409616- (Aspergillus niger KJC3)
GCCGTGTGGCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCAC
GGCGTCGAGATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTT
CCCTCCTACTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCA
ACCTCCTCAAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACC
CGCTGCCCCAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCA
GTTCCGCGACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCC
GTAACGTCCCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCC
AAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGAT
CGGCTCCGGTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACC
CCTTCATCGTCTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACC
AAGCAGCGCCTCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGG
TATCTCCAACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGG
CCACCATTGGCCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGT
ATCCTCGAAGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGT
CCCCATTGTCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGG
CTCAGTACTCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAG
ACCCTGCCCACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAATT
ATGGTGAATCGCACTGCCGCTCTGTCGGCTGCATCGTCGACGGCTGCCCC
CCAGGAATGGAACTCACCGAGGACGACATCCAGCCCCAGATGACCCGCAG
ACGTCCCGGTCAGAGTGCTCTGACGACGCCTCGTAATGAGAAGGACCGCG
TTGAAATCCAGTCCGGAACGGAGTTTGGAGTTACCCTGGGAACTCCGATT
GGCATGATGGTGCGCAACGAAGACCAGAGACCCAAGGACTACGGCAACAG
CACCATGGACCTGTACCCCCGCCCCAGTCACGCCGACTTGACCTATCTGG
AGAAGTACGGCGTCAAGGCCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGT
GAGACGATTGATGTCGACGTGGGGTGATTACTTCCGGGTCACCACGCCGT
GTGGCTGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGT
CGAGATTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTC
CTACTCCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTC
CTCAAGACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTG
CCCCAACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCC
GCGACAACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAAC
GTCCCCGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCT
CGCCCACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCT
CCGGTTTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTC
ATCGTCTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAGCA
GCGCCTCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTATCT
CCAACGGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACC
ATTGGCCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCT
CGAAGCCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCA
TTGTCGAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAG
TACTCCCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCT
GCCCACTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAATTATGGT
GAATCGCACTGCCGCTCTGTCGGCTGCATCGTCGACGGCTGCCCCCCAGG
AATGGAACTCACCGAGGACGACATCCAGCCCCAGATGACCCGCAGACGTC
CCGGTCAGAGTGCTCTGACGACGCCTCGTAATGAGAAGGACCGCGTTGAA
ATCCAGTCCGGAACGGAGTTTGGAGTTACCCTGGGAACTCCGATTGGCAT
GATGGTGCGCAACGAAGACCAGAGACCCAAGGACTACGGCAACAGCACCA
TGGACCTGTACCCCCGCCCCAGTCACGCCGACTTGACCTATCTGGAGAAG
TACGGCGTCAAGGCCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGTGAGAC
GATTGATGTCGACGTGGGGTGATTACTTCCGGGTCACCACGCCGTGTGGC
TGCCGGTGCCATCGCCGAAAAGTACTTGCGCCTCTCGCACGGCGTCGAGA
TTGTCGCTTTCGTCTCCTCTGTTGGCAACGAACACCTGTTCCCTCCTACT
CCCGAGCACCCCACTGCCTCCACCAACCCTGAATACCTCAACCTCCTCAA
GACCATCACCCGCACTACCGTCGACGAGTTCGCGCCCACCCGCTGCCCCA
ACGCCGATGCCGCCGCGCGCATGACCAAGGTGATCGAGCAGTTCCGCGAC
AACCACGACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCC
CGTCGGTCTGGGTGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCC
ACGCCATGCTCAGCATCCCCGCCACCAAGGGCTTCGAGATCGGCTCCGGT
TTCGGCGGCTGCGAGGTCCCCGGCTCTATCCACAACGACCCCTTCATCGT
CTCCGATGTCCCGACCCAACTCGGCCCCAACACCACCACCAAGCAGCGCC
TCACCACCAAGACCAACAACTCCGGTGGTATCCAGGGCGGTATCTCCAAC
GGTGCCGACATCTACTTCCGCATCGCCTTCAAGCCCCCGGCCACCATTGG
CCAGGCCCAGAACACCGCCACCTACGACTTCGGCGAGGGTATCCTCGAAG
CCAAGGGCCGTCACGACCCCTGCGTCACTCCCCGCGCCGTCCCCATTGTC
GAGGCCATGTCCGCGCTGGTCGTCATGGACGCTCTGATGGCTCAGTACTC
CCGCGAGAGCGCCAAGTCTCTCCTGCCCCCGTTGCCCAAGACCCTGCCCA
CTCGTCCCACTCTCGGCACCAACGGTCACAGCGCATAATTATGGTGAATC
GCACTGCCGCTCTGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGAATGG
AACTCACCGAGGACGACATCCAGCCCCAGATGACCCGCAGACGTCCCGGT
CAGAGTGCTCTGACGACGCCTCGTAATGAGAAGGACCGCGTTGAAATCCA
GTCCGGAACGGAGTTTGGAGTTACCCTGGGAACTCCGATTGGCATGATGG
TGCGCAACGAAGACCAGAGACCCAAGGACTACGGCAACAGCACCATGGAC
CTGTACCCCCGCCCCAGTCACGCCGACTTGACCTATCTGGAGAAGTACGG
CGTCAAGGCCAGCAGCGGTGGTGGTCGCAGTAGTGCCCGTGAGACGATTG
ATGTCGACGTGGGGTGATTACTTCCGGGTCACCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004107chorismate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARO2KJC3_011718Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011718-T1KJC3_011718-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011718-T1.cdsKJC3_011718-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011718-T1.utr3p1KJC3_011718-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011718-T1.exon3KJC3_011718-T1.exon3Aspergillus niger KJC3exon
KJC3_011718-T1.exon2KJC3_011718-T1.exon2Aspergillus niger KJC3exon
KJC3_011718-T1.exon1KJC3_011718-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011718-T1.utr5p1KJC3_011718-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262DUV
DBxrefInterPro:IPR020541
DBxrefInterPro:IPR000453
DBxrefInterPro:IPR035904
DBxrefPFAM:PF01264
Productbifunctional chorismate synthase/riboflavin reductase [NAD(P)H] aro2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1407628..1409616 -
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