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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1431222..1433829+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011727-T1 ID=KJC3_011727-T1|Name=KJC3_011727-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2608bp|location=Sequence derived from alignment at ch8:1431222..1433829+ (Aspergillus niger KJC3)
ATCGGACCCAATCTTTGCGGACTACTTTGCCCCAAATGCGCTTGAAATTA
TGGATGCGCGCGCCCACGGGTCGACAGGGCCGCCAGGGGAGGTCTGCAGC
TGCGTTCCTGCTAACTACTTACCTTCTTCATCCATCCGATCCGCGTCCCG
GTTTACCCATTTGCTCCCCCATTCAACTTCCTTTATTCAGGGCGGCCTCA
ACTGTTTTGACTTACGCAGATTCTATATATAAGCGTCATTGGGGCTGTCA
CCTTCCACAGCATGGCTTTTGCCACGATCAACTCATCAGTGCCGTCCAGC
ATCCCGGCCATTGAGGACGCTTTTGCCGCCGAACCAGCGCTCAAAAAACG
GGTTTACGATGCGATCGGTGCGTATTATGTCGCTTAGGACAACAATCTAC
ATTCACCCCACAACCCCATAGAAGGTGCAAGGTCTGCCGGCTGACCCTCT
TATCTTGTAAACAGCACATACCCCGCAACATGGACTTCTCTTCGAAGATA
TCGCGAAATATACCTCCAGCCTGCTGGCCAGGACTGCAACCGCCCCCGTT
CGGCCTGTCGAGGTCGTCAGCGACGGCCCAGCCATGAAGAAACGAAAACT
ACAGAATGGCAATGCTACAAGTGCCCAATCTTCCGGCGATTTGAAATCCG
ATACTTCGCTCCAGTTCTACATGCAGGATGTTTCCTTTGCTGTTCCCCAG
CGGAAGAAGCTTACGCTCGAAGTCACTGCCGGATTTTTACGTGCGAGAAA
CCAGACATCGAAGGAGGTGGAGTTTGGTGTACCTTTGGATAACATACGTA
TGTGTAGAACTATGGTTGACGGAGGTGGTGTCAAGGCTGACAACGTTGCT
GGATCCGAACAGAGCATGTCTTGTGCCTCCCCGTTCCCGAGAAGAACCAG
CGACAATTCAATTTTTGCATCATCCCTCAATATGCGGACGGCGTCAACTC
ACCGCCTGAAGGTGTAGCTGCTCCCGATGCCATCGTATGGACGGTCAACG
ACGGGCCTCCCAAGGCAGCGTTCTCAGGCAATGGACAACAGCTTGGAACG
GATAACGAAGAAACGGCAGATAAACTTGTCCAGCGGATATTGAACGACAG
CCTCCCGCGGACCAAGGTTGTGCGCCCGGATGAGCGAGAGTTCGTGAGTG
CTATGCCTGAGGCTCATCGCAAGGGGGAGAAGGCCTTTCATGTCAAGGCC
TTCCGCGGCAGTAAAGAAGGTATCGTTATGCCCGCCGTGCTCTTGCCCTA
CGTCCCCGTAACTAAAATTATTCTATCTCAGGTTATCTCTTCCTTCTCTC
TACGGGAATACTATTCGGGTTCAAGAAACCACTGGTTTTCTTTGCCTTTG
AAAACGTCGACTCAATCTCATACACATCTGTCCTGCAGCGGACCTTTAAT
CTCAATGTTGTAGCTCGTCCTACGTCAAGCGAAGAGACGCAGGAATTCGA
GTTCTCCATGATCGACCAGGCTGACTTTTCCGGAATTGATGGTTACATCA
AAAAGCATGGTCTGCAGGATGCCAGTCTTGCCGAAGCACGGCGTGCGAAG
CGATACAACGTCAACAGTGCCAAGGGAGAAGATGAAGCTGCTGCCAATGA
GGAAGGAGCCGTCGAGGAGGAAAGTGAGCTTCAAAAAGCCCAACGCGAGC
TGGAAGATCAAGAGGATGAGGACGAGGAAGATTATGATCCCGGGAGTGAC
AGTGACAGCGACGGAAGCGGCTCTAGCAGCGAGGAGGATGATGATGATGA
GGAGGACGATGAAGGCGACATGGAAGAGGACGACGAAGAAGGAGACCGAA
ATCTGGTGGCGGAGGAGCTCGGAAGTGAAGCGGAAGATGTTCCGGCAGAG
GAACTGTGAGAGACCGCCTTTATATCGGAACTGTTGCTGTATGAATAAGT
GACTGTTGCTATGGTCACACCAACACTTTTTGTGCGATGTGATGATGTGT
ATTCGACAATCGCGTGGCTAAGCCATTGTACTGGAAGGGCAGCCCGTTAC
ACTACACCAGGCCACTCGAACGTATGAATTTTGGGGGCGATTTAGGTCGG
ACTATGCCCCTGCATTATCTGGCATACGCGCCTGTATGCCGTAGAGTTTT
ACCAACGAGGCATTCCACGTCTGATGTAGTTGGGGGAGGAGAAACCGTTT
CAAGGCTGCATTGAATGCGTTTCAAACGGGCAGGCATCACCACAAGTTCA
ATCGATCAGAACAAACCAAGCACAGGCATCCAGTGAGATGTGGGTCATGG
ACGTGTCAGATGCATCTGAAATGGACGAGCCACTGGTGGATGTGCTACGG
AGTTGCAGGATGCCCGGCTGTGCGGCGCAGTACTTACTTAGTAGCGACTT
TTCATGGGAAGTCAGCCCTCCATGGGAAATCCGATCATGACGGCCGGTTA
CTTCTTCGAGAACGCTTCGAATCCTCCATATTATTGAAAAGTGGTGGAAG
CCGCCAACCCAATTGGGCTCTTCGGAAGCACCCTTGTGCTATCAGGGCCC
CCAAATCCCACTCCGATACCTTGTACCAATGAAATCATCAGGTCGATACC
TTGATAATGAGGACACTGCGGAGCAAAGTCATCCTCGTCCTACTCCTCGT
TTGGAAAG back to topCoding sequence (CDS) from alignment at ch8:1431222..1433829+ >KJC3_011727-T1 ID=KJC3_011727-T1|Name=KJC3_011727-T1|organism=Aspergillus niger KJC3|type=CDS|length=5496bp|location=Sequence derived from alignment at ch8:1431222..1433829+ (Aspergillus niger KJC3)
ATGGCTTTTGCCACGATCAACTCATCAGTGCCGTCCAGCATCCCGGCCAT
TGAGGACGCTTTTGCCGCCGAACCAGCGCTCAAAAAACGGGTTTACGATG
CGATCGCACATACCCCGCAACATGGACTTCTCTTCGAAGATATCGCGAAA
TATACCTCCAGCCTGCTGGCCAGGACTGCAACCGCCCCCGTTCGGCCTGT
CGAGGTCGTCAGCGACGGCCCAGCCATGAAGAAACGAAAACTACAGAATG
GCAATGCTACAAGTGCCCAATCTTCCGGCGATTTGAAATCCGATACTTCG
CTCCAGTTCTACATGCAGGATGTTTCCTTTGCTGTTCCCCAGCGGAAGAA
GCTTACGCTCGAAGTCACTGCCGGATTTTTACGTGCGAGAAACCAGACAT
CGAAGGAGGTGGAGTTTGGTGTACCTTTGGATAACATACAGCATGTCTTG
TGCCTCCCCGTTCCCGAGAAGAACCAGCGACAATTCAATTTTTGCATCAT
CCCTCAATATGCGGACGGCGTCAACTCACCGCCTGAAGGTGTAGCTGCTC
CCGATGCCATCGTATGGACGGTCAACGACGGGCCTCCCAAGGCAGCGTTC
TCAGGCAATGGACAACAGCTTGGAACGGATAACGAAGAAACGGCAGATAA
ACTTGTCCAGCGGATATTGAACGACAGCCTCCCGCGGACCAAGGTTGTGC
GCCCGGATGAGCGAGAGTTCGTGAGTGCTATGCCTGAGGCTCATCGCAAG
GGGGAGAAGGCCTTTCATGTCAAGGCCTTCCGCGGCAGTAAAGAAGGTTA
TCTCTTCCTTCTCTCTACGGGAATACTATTCGGGTTCAAGAAACCACTGG
TTTTCTTTGCCTTTGAAAACGTCGACTCAATCTCATACACATCTGTCCTG
CAGCGGACCTTTAATCTCAATGTTGTAGCTCGTCCTACGTCAAGCGAAGA
GACGCAGGAATTCGAGTTCTCCATGATCGACCAGGCTGACTTTTCCGGAA
TTGATGGTTACATCAAAAAGCATGGTCTGCAGGATGCCAGTCTTGCCGAA
GCACGGCGTGCGAAGCGATACAACGTCAACAGTGCCAAGGGAGAAGATGA
AGCTGCTGCCAATGAGGAAGGAGCCGTCGAGGAGGAAAGTGAGCTTCAAA
AAGCCCAACGCGAGCTGGAAGATCAAGAGGATGAGGACGAGGAAGATTAT
GATCCCGGGAGTGACAGTGACAGCGACGGAAGCGGCTCTAGCAGCGAGGA
GGATGATGATGATGAGGAGGACGATGAAGGCGACATGGAAGAGGACGACG
AAGAAGGAGACCGAAATCTGGTGGCGGAGGAGCTCGGAAGTGAAGCGGAA
GATGTTCCGGCAGAGGAACTGTGAATGGCTTTTGCCACGATCAACTCATC
AGTGCCGTCCAGCATCCCGGCCATTGAGGACGCTTTTGCCGCCGAACCAG
CGCTCAAAAAACGGGTTTACGATGCGATCGCACATACCCCGCAACATGGA
CTTCTCTTCGAAGATATCGCGAAATATACCTCCAGCCTGCTGGCCAGGAC
TGCAACCGCCCCCGTTCGGCCTGTCGAGGTCGTCAGCGACGGCCCAGCCA
TGAAGAAACGAAAACTACAGAATGGCAATGCTACAAGTGCCCAATCTTCC
GGCGATTTGAAATCCGATACTTCGCTCCAGTTCTACATGCAGGATGTTTC
CTTTGCTGTTCCCCAGCGGAAGAAGCTTACGCTCGAAGTCACTGCCGGAT
TTTTACGTGCGAGAAACCAGACATCGAAGGAGGTGGAGTTTGGTGTACCT
TTGGATAACATACAGCATGTCTTGTGCCTCCCCGTTCCCGAGAAGAACCA
GCGACAATTCAATTTTTGCATCATCCCTCAATATGCGGACGGCGTCAACT
CACCGCCTGAAGGTGTAGCTGCTCCCGATGCCATCGTATGGACGGTCAAC
GACGGGCCTCCCAAGGCAGCGTTCTCAGGCAATGGACAACAGCTTGGAAC
GGATAACGAAGAAACGGCAGATAAACTTGTCCAGCGGATATTGAACGACA
GCCTCCCGCGGACCAAGGTTGTGCGCCCGGATGAGCGAGAGTTCGTGAGT
GCTATGCCTGAGGCTCATCGCAAGGGGGAGAAGGCCTTTCATGTCAAGGC
CTTCCGCGGCAGTAAAGAAGGTTATCTCTTCCTTCTCTCTACGGGAATAC
TATTCGGGTTCAAGAAACCACTGGTTTTCTTTGCCTTTGAAAACGTCGAC
TCAATCTCATACACATCTGTCCTGCAGCGGACCTTTAATCTCAATGTTGT
AGCTCGTCCTACGTCAAGCGAAGAGACGCAGGAATTCGAGTTCTCCATGA
TCGACCAGGCTGACTTTTCCGGAATTGATGGTTACATCAAAAAGCATGGT
CTGCAGGATGCCAGTCTTGCCGAAGCACGGCGTGCGAAGCGATACAACGT
CAACAGTGCCAAGGGAGAAGATGAAGCTGCTGCCAATGAGGAAGGAGCCG
TCGAGGAGGAAAGTGAGCTTCAAAAAGCCCAACGCGAGCTGGAAGATCAA
GAGGATGAGGACGAGGAAGATTATGATCCCGGGAGTGACAGTGACAGCGA
CGGAAGCGGCTCTAGCAGCGAGGAGGATGATGATGATGAGGAGGACGATG
AAGGCGACATGGAAGAGGACGACGAAGAAGGAGACCGAAATCTGGTGGCG
GAGGAGCTCGGAAGTGAAGCGGAAGATGTTCCGGCAGAGGAACTGTGAAT
GGCTTTTGCCACGATCAACTCATCAGTGCCGTCCAGCATCCCGGCCATTG
AGGACGCTTTTGCCGCCGAACCAGCGCTCAAAAAACGGGTTTACGATGCG
ATCGCACATACCCCGCAACATGGACTTCTCTTCGAAGATATCGCGAAATA
TACCTCCAGCCTGCTGGCCAGGACTGCAACCGCCCCCGTTCGGCCTGTCG
AGGTCGTCAGCGACGGCCCAGCCATGAAGAAACGAAAACTACAGAATGGC
AATGCTACAAGTGCCCAATCTTCCGGCGATTTGAAATCCGATACTTCGCT
CCAGTTCTACATGCAGGATGTTTCCTTTGCTGTTCCCCAGCGGAAGAAGC
TTACGCTCGAAGTCACTGCCGGATTTTTACGTGCGAGAAACCAGACATCG
AAGGAGGTGGAGTTTGGTGTACCTTTGGATAACATACAGCATGTCTTGTG
CCTCCCCGTTCCCGAGAAGAACCAGCGACAATTCAATTTTTGCATCATCC
CTCAATATGCGGACGGCGTCAACTCACCGCCTGAAGGTGTAGCTGCTCCC
GATGCCATCGTATGGACGGTCAACGACGGGCCTCCCAAGGCAGCGTTCTC
AGGCAATGGACAACAGCTTGGAACGGATAACGAAGAAACGGCAGATAAAC
TTGTCCAGCGGATATTGAACGACAGCCTCCCGCGGACCAAGGTTGTGCGC
CCGGATGAGCGAGAGTTCGTGAGTGCTATGCCTGAGGCTCATCGCAAGGG
GGAGAAGGCCTTTCATGTCAAGGCCTTCCGCGGCAGTAAAGAAGGTTATC
TCTTCCTTCTCTCTACGGGAATACTATTCGGGTTCAAGAAACCACTGGTT
TTCTTTGCCTTTGAAAACGTCGACTCAATCTCATACACATCTGTCCTGCA
GCGGACCTTTAATCTCAATGTTGTAGCTCGTCCTACGTCAAGCGAAGAGA
CGCAGGAATTCGAGTTCTCCATGATCGACCAGGCTGACTTTTCCGGAATT
GATGGTTACATCAAAAAGCATGGTCTGCAGGATGCCAGTCTTGCCGAAGC
ACGGCGTGCGAAGCGATACAACGTCAACAGTGCCAAGGGAGAAGATGAAG
CTGCTGCCAATGAGGAAGGAGCCGTCGAGGAGGAAAGTGAGCTTCAAAAA
GCCCAACGCGAGCTGGAAGATCAAGAGGATGAGGACGAGGAAGATTATGA
TCCCGGGAGTGACAGTGACAGCGACGGAAGCGGCTCTAGCAGCGAGGAGG
ATGATGATGATGAGGAGGACGATGAAGGCGACATGGAAGAGGACGACGAA
GAAGGAGACCGAAATCTGGTGGCGGAGGAGCTCGGAAGTGAAGCGGAAGA
TGTTCCGGCAGAGGAACTGTGAATGGCTTTTGCCACGATCAACTCATCAG
TGCCGTCCAGCATCCCGGCCATTGAGGACGCTTTTGCCGCCGAACCAGCG
CTCAAAAAACGGGTTTACGATGCGATCGCACATACCCCGCAACATGGACT
TCTCTTCGAAGATATCGCGAAATATACCTCCAGCCTGCTGGCCAGGACTG
CAACCGCCCCCGTTCGGCCTGTCGAGGTCGTCAGCGACGGCCCAGCCATG
AAGAAACGAAAACTACAGAATGGCAATGCTACAAGTGCCCAATCTTCCGG
CGATTTGAAATCCGATACTTCGCTCCAGTTCTACATGCAGGATGTTTCCT
TTGCTGTTCCCCAGCGGAAGAAGCTTACGCTCGAAGTCACTGCCGGATTT
TTACGTGCGAGAAACCAGACATCGAAGGAGGTGGAGTTTGGTGTACCTTT
GGATAACATACAGCATGTCTTGTGCCTCCCCGTTCCCGAGAAGAACCAGC
GACAATTCAATTTTTGCATCATCCCTCAATATGCGGACGGCGTCAACTCA
CCGCCTGAAGGTGTAGCTGCTCCCGATGCCATCGTATGGACGGTCAACGA
CGGGCCTCCCAAGGCAGCGTTCTCAGGCAATGGACAACAGCTTGGAACGG
ATAACGAAGAAACGGCAGATAAACTTGTCCAGCGGATATTGAACGACAGC
CTCCCGCGGACCAAGGTTGTGCGCCCGGATGAGCGAGAGTTCGTGAGTGC
TATGCCTGAGGCTCATCGCAAGGGGGAGAAGGCCTTTCATGTCAAGGCCT
TCCGCGGCAGTAAAGAAGGTTATCTCTTCCTTCTCTCTACGGGAATACTA
TTCGGGTTCAAGAAACCACTGGTTTTCTTTGCCTTTGAAAACGTCGACTC
AATCTCATACACATCTGTCCTGCAGCGGACCTTTAATCTCAATGTTGTAG
CTCGTCCTACGTCAAGCGAAGAGACGCAGGAATTCGAGTTCTCCATGATC
GACCAGGCTGACTTTTCCGGAATTGATGGTTACATCAAAAAGCATGGTCT
GCAGGATGCCAGTCTTGCCGAAGCACGGCGTGCGAAGCGATACAACGTCA
ACAGTGCCAAGGGAGAAGATGAAGCTGCTGCCAATGAGGAAGGAGCCGTC
GAGGAGGAAAGTGAGCTTCAAAAAGCCCAACGCGAGCTGGAAGATCAAGA
GGATGAGGACGAGGAAGATTATGATCCCGGGAGTGACAGTGACAGCGACG
GAAGCGGCTCTAGCAGCGAGGAGGATGATGATGATGAGGAGGACGATGAA
GGCGACATGGAAGAGGACGACGAAGAAGGAGACCGAAATCTGGTGGCGGA
GGAGCTCGGAAGTGAAGCGGAAGATGTTCCGGCAGAGGAACTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011727-T1.utr5p1 | KJC3_011727-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011727-T1.utr3p1 | KJC3_011727-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR013719 |
| DBxref | PFAM:PF08512 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1431222..1433829 + |
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