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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1457842..1460443+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011734-T2 ID=KJC3_011734-T2|Name=KJC3_011734-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2602bp|location=Sequence derived from alignment at ch8:1457842..1460443+ (Aspergillus niger KJC3)
CGACACCAGTTCGAGCCATCTAGTCGCAGATTCTTTCTCATTTGCTGCAA
TCAAGACCACAGTACCTGGCAGACATATCCAAGATTATCTCCAGACTCCA
GTATCTCAGGATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCA
CTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATA
ACTAGTAAGACACACCTATTCTGTTCTCGTTCTATTTTATACTAATGAAA
CTGATAAACCTAAGAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTC
AGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTC
ATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCC
CAGAATCGCAGCATTTGACCTGGTCAGTTTAGAACGAAACCGTTAGGCGA
ATTTACGGTTTATCATTACGCGAGCTCGAGACTGACTAGGTGATCGCACC
TAGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAA
TGGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGG
AGTTGAACGACAATGGGTATGTAGTAGGTTGGCTTATAGTTCCTTGATCG
GACTGCTTCCGGACAACAGGATATTGATCTCTCTTCTTTGCAGATACTAC
GTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAA
GAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGT
CGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGCCACC
GAAGATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCT
GGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTT
TTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGG
TAAGGCTGGCCTTTCGAAATCAACCCACGGACTTCATACGCTAACGGCGG
TTCAAGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGG
AGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCG
ACAATTTACCTGCAAGCAGAGCCAACCGACGATGGTGAGTCTCCATGCTC
GGGGTGATTGCGAATCGACCATCAGAATACCCTATTGACAACTTGTCTCG
CATGATGCAGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGT
GATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAAT
ACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACC
GTACGTCTTCTTTATTGTCTCTACCAAACTTTATACGGGTTACCTTCTTC
CAACACACCCTTCTACGCCAAGCCCAAAAAGTGTCAGTGGCTTCGCTCGC
GCAGCAGCTATACACCTCAACGACCTACCCACATCTATGTACTACCAAGA
TTGCATAATCTATCAGCTAACCAACCGCTCACCACAGCGCCCTAAATGCA
TCAAAGTGGCGAAGGAACACCTTGCAGCCGGTAGATCTGTGGTTGTCGGT
ACGTGAACGTTGGGAACGGGGCAACCTTTTCCCCAAGAGACCAACCCACT
CAACCCTTGCATTGACACTTCGACGGTCTACGATGTCGATTTCTCGGGCT
CGAGTCTAGCCAGGCTACACCAACCCTAGCCCATATTGCGATCCATCCCT
CCCCGCTTCTCCTTCAAGTACCTACAGTGACTTTGCAAATGCACGAACGA
TTAGATTTCTTCGCTGATCAAACGCACAGACAACACCAATGCCGACCCGG
AAACCAGATCCGAGTGGGTAGAAGTCGCTAAGGAATTCAACGTCCCGATT
CGCTGTGTCTATTTCACAGCTTCCCCGGCCCTCTGCCGGCATAATAATGC
GGTCCGTGCCGCAAATCAAACCTTGGTAAGTCCGTGCGAGATGAAGATGC
GCGTGCACTGCATCCCCATTGTCCCCTTCCACCCCCTCCCTCCTACCCAA
AACCATAGACTGTCCTCATATTTCCCTTTTCGAGTTGTTCGAAGGGAGGT
GGTGGTGATAGCACCATCTTTCCCAACGGTCACACGTGTATCGTGACATG
TTATCGGATCATCAAACACACCTATACCCATACATGCATACATACACCAT
TACAACAACCGATGTACACCATACTCAATACTAACCTCCATCGAATCATA
GAACCCCGAATCACGCACCCTTCTCCCCGGAATTGCCTTTGGAGATTTCC
TCCGCCGATTCAAAGAACCCTTAATGGAAGAAGGGTTCCAGGACATAATT
CGCGTGGAATTCCGCTTCCGAGGAGACGAAAACGCCAAAAGATTATGGGG
TCAGTACTGGGTGTAAAGACAACTCTCTGTGTAGTAGTATCCAAACAACC
AACCGACCAACCAACCATGGTTCATGCCTTATGGCCCCATATGAAAGCAA
ACATGGGAACACAGCTCAATTCAAATTCTACCCATAAATAAGTCTAGTTA
CC back to topCoding sequence (CDS) from alignment at ch8:1457842..1460443+ >KJC3_011734-T2 ID=KJC3_011734-T2|Name=KJC3_011734-T2|organism=Aspergillus niger KJC3|type=CDS|length=7056bp|location=Sequence derived from alignment at ch8:1457842..1460443+ (Aspergillus niger KJC3)
ATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTAT
ATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGG
CTGTTTCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATC
ACCTGGCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGA
TTCGAGTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACC
TGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAAT
GGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGA
GTTGAACGACAATGGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGA
TCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTT
GTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCC
ACTAAGTGTATATGCAGCCACCGAAGATGACGAATATAGGAAACCCAGGA
CAGGTCTATGGAAAGAGATGCTGGACGACTACGACTTCGATGTGTCAGGA
GTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAA
CGACCATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTT
TCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTG
GAACCGTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACCGACGATGT
GGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCG
GCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCG
TTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACCCGCCCTAAATG
CATCAAAGTGGCGAAGGAACACCTTGCAGCCGGTAGATCTGTGGTTGTCG
GTACGTGAATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACT
CGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAAC
TAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCG
AACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTAT
ACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGC
ATTTGACCTGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCC
CCAGGAATGGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAG
CTCAAGGAGTTGAACGACAATGGATACTACGTGGTGGTCGTAACGAATCA
AAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTA
AAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTG
GACATCCCACTAAGTGTATATGCAGCCACCGAAGATGACGAATATAGGAA
ACCCAGGACAGGTCTATGGAAAGAGATGCTGGACGACTACGACTTCGATG
TGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGA
CGGCCAAACGACCATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAA
AGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGC
CCCTCGTGGAACCGTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACC
GACGATGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGAT
ATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACC
TGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACCCGC
CCTAAATGCATCAAAGTGGCGAAGGAACACCTTGCAGCCGGTAGATCTGT
GGTTGTCGGTACGTGAATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTT
CCCCCACTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCT
ACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTCAGAA
AAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTCATTG
GCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCCCAGA
ATCGCAGCATTTGACCTGGATTCAACGCTCGTCTCGACAGCCTCTGGAAA
TACGTTCCCCAGGAATGGGTCAGACTGGAAGTGGTGGCATGATACGATAC
CTGGGAAGCTCAAGGAGTTGAACGACAATGGATACTACGTGGTGGTCGTA
ACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAG
CGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGA
AGCAACTGGACATCCCACTAAGTGTATATGCAGCCACCGAAGATGACGAA
TATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCTGGACGACTACGA
CTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACG
CTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGCGGATTTGCTCTT
AATATCAAAGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGA
CCCCGAGCCCCTCGTGGAACCGTTCGATCCGACAATTTACCTGCAAGCAG
AGCCAACCGACGATGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAG
CTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTG
GGAATACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTA
AGACCCGCCCTAAATGCATCAAAGTGGCGAAGGAACACCTTGCAGCCGGT
AGATCTGTGGTTGTCGGTACGTGAATGGCCGGCGGTGGGGGCGTGAAACG
TACAGCTTCCCCCACTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGG
TTGAGTCTACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACA
TCTCAGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGC
GGTCATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGA
AGCCCAGAATCGCAGCATTTGACCTGGATTCAACGCTCGTCTCGACAGCC
TCTGGAAATACGTTCCCCAGGAATGGGTCAGACTGGAAGTGGTGGCATGA
TACGATACCTGGGAAGCTCAAGGAGTTGAACGACAATGGATACTACGTGG
TGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAA
GGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGC
TGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGCCACCGAAG
ATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCTGGAC
GACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGT
AGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGCGGAT
TTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTC
AATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCGACAATTTACCT
GCAAGCAGAGCCAACCGACGATGTGGCGCCACCTTTCTCTCGCCAGAGCC
CCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCG
TTCTACTGGGAATACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGA
CCTTCTTAAGACCCGCCCTAAATGCATCAAAGTGGCGAAGGAACACCTTG
CAGCCGGTAGATCTGTGGTTGTCGGTACGTGAATGGCCGGCGGTGGGGGC
GTGAAACGTACAGCTTCCCCCACTCGAGCTATATCGCCGCCTCCACTCAA
AAGGAAGGTTGAGTCTACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTA
CCCCGACATCTCAGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAAC
AACAGTGCGGTCATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAG
TACAGAGAAGCCCAGAATCGCAGCATTTGACCTGGATTCAACGCTCGTCT
CGACAGCCTCTGGAAATACGTTCCCCAGGAATGGGTCAGACTGGAAGTGG
TGGCATGATACGATACCTGGGAAGCTCAAGGAGTTGAACGACAATGGATA
CTACGTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATC
TCAAGAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGG
GTGTCGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGC
CACCGAAGATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGA
TGCTGGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCC
GTTTTTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGA
CCGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGGAGT
TCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCGACA
ATTTACCTGCAAGCAGAGCCAACCGACGATGTGGCGCCACCTTTCTCTCG
CCAGAGCCCCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCA
AATCCTCGTTCTACTGGGAATACCTGGAACCGTTGAAATACGAACGAGTC
AACCAAGACCTTCTTAAGACCCGCCCTAAATGCATCAAAGTGGCGAAGGA
ACACCTTGCAGCCGGTAGATCTGTGGTTGTCGGTACGTGAATGGCCGGCG
GTGGGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTATATCGCCGCCT
CCACTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGGCTGTTTCCTC
CTTCTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATCACCTGGCGGA
TTGTCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGATTCGAGTCAC
AAGAATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACCTGGATTCAAC
GCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAATGGGTCAGACT
GGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGAGTTGAACGAC
AATGGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAA
GAAAGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCA
AGGAGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTA
TATGCAGCCACCGAAGATGACGAATATAGGAAACCCAGGACAGGTCTATG
GAAAGAGATGCTGGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGT
CAGAGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCC
ATGGTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCC
CGAGGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCG
ATCCGACAATTTACCTGCAAGCAGAGCCAACCGACGATGTGGCGCCACCT
TTCTCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGG
TGCGGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCGTTGAAATACG
AACGAGTCAACCAAGACCTTCTTAAGACCCGCCCTAAATGCATCAAAGTG
GCGAAGGAACACCTTGCAGCCGGTAGATCTGTGGTTGTCGGTACGTGAAT
GGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTATAT
CGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGGCT
GTTTCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATCAC
CTGGCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGATT
CGAGTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACCTG
GATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAATGG
GTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGAGT
TGAACGACAATGGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGATC
AGTCTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTTGT
CAACTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCCAC
TAAGTGTATATGCAGCCACCGAAGATGACGAATATAGGAAACCCAGGACA
GGTCTATGGAAAGAGATGCTGGACGACTACGACTTCGATGTGTCAGGAGT
CAATCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAACG
ACCATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTTTC
AAGACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGA
ACCGTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACCGACGATGTGG
CGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCGGC
AGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCGTT
GAAATACGAACGAGTCAACCAAGACCTTCTTAAGACCCGCCCTAAATGCA
TCAAAGTGGCGAAGGAACACCTTGCAGCCGGTAGATCTGTGGTTGTCGGT
ACGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011734-T2.utr5p1 | KJC3_011734-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR006551 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR013954 |
| DBxref | InterPro:IPR006549 |
| DBxref | PFAM:PF08645 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1457842..1460443 + |
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