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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1457842..1460443+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011734-T3 ID=KJC3_011734-T3|Name=KJC3_011734-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2602bp|location=Sequence derived from alignment at ch8:1457842..1460443+ (Aspergillus niger KJC3) CGACACCAGTTCGAGCCATCTAGTCGCAGATTCTTTCTCATTTGCTGCAA
TCAAGACCACAGTACCTGGCAGACATATCCAAGATTATCTCCAGACTCCA
GTATCTCAGGATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCA
CTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATA
ACTAGTAAGACACACCTATTCTGTTCTCGTTCTATTTTATACTAATGAAA
CTGATAAACCTAAGAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTC
AGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTC
ATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCC
CAGAATCGCAGCATTTGACCTGGTCAGTTTAGAACGAAACCGTTAGGCGA
ATTTACGGTTTATCATTACGCGAGCTCGAGACTGACTAGGTGATCGCACC
TAGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAA
TGGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGG
AGTTGAACGACAATGGGTATGTAGTAGGTTGGCTTATAGTTCCTTGATCG
GACTGCTTCCGGACAACAGGATATTGATCTCTCTTCTTTGCAGATACTAC
GTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAA
GAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGT
CGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGCCACC
GAAGATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCT
GGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTT
TTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGG
TAAGGCTGGCCTTTCGAAATCAACCCACGGACTTCATACGCTAACGGCGG
TTCAAGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGG
AGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCG
ACAATTTACCTGCAAGCAGAGCCAACCGACGATGGTGAGTCTCCATGCTC
GGGGTGATTGCGAATCGACCATCAGAATACCCTATTGACAACTTGTCTCG
CATGATGCAGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGT
GATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAAT
ACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACC
GTACGTCTTCTTTATTGTCTCTACCAAACTTTATACGGGTTACCTTCTTC
CAACACACCCTTCTACGCCAAGCCCAAAAAGTGTCAGTGGCTTCGCTCGC
GCAGCAGCTATACACCTCAACGACCTACCCACATCTATGTACTACCAAGA
TTGCATAATCTATCAGCTAACCAACCGCTCACCACAGCGCCCTAAATGCA
TCAAAGTGGCGAAGGAACACCTTGCAGCCGGTAGATCTGTGGTTGTCGGT
ACGTGAACGTTGGGAACGGGGCAACCTTTTCCCCAAGAGACCAACCCACT
CAACCCTTGCATTGACACTTCGACGGTCTACGATGTCGATTTCTCGGGCT
CGAGTCTAGCCAGGCTACACCAACCCTAGCCCATATTGCGATCCATCCCT
CCCCGCTTCTCCTTCAAGTACCTACAGTGACTTTGCAAATGCACGAACGA
TTAGATTTCTTCGCTGATCAAACGCACAGACAACACCAATGCCGACCCGG
AAACCAGATCCGAGTGGGTAGAAGTCGCTAAGGAATTCAACGTCCCGATT
CGCTGTGTCTATTTCACAGCTTCCCCGGCCCTCTGCCGGCATAATAATGC
GGTCCGTGCCGCAAATCAAACCTTGGTAAGTCCGTGCGAGATGAAGATGC
GCGTGCACTGCATCCCCATTGTCCCCTTCCACCCCCTCCCTCCTACCCAA
AACCATAGACTGTCCTCATATTTCCCTTTTCGAGTTGTTCGAAGGGAGGT
GGTGGTGATAGCACCATCTTTCCCAACGGTCACACGTGTATCGTGACATG
TTATCGGATCATCAAACACACCTATACCCATACATGCATACATACACCAT
TACAACAACCGATGTACACCATACTCAATACTAACCTCCATCGAATCATA
GAACCCCGAATCACGCACCCTTCTCCCCGGAATTGCCTTTGGAGATTTCC
TCCGCCGATTCAAAGAACCCTTAATGGAAGAAGGGTTCCAGGACATAATT
CGCGTGGAATTCCGCTTCCGAGGAGACGAAAACGCCAAAAGATTATGGGG
TCAGTACTGGGTGTAAAGACAACTCTCTGTGTAGTAGTATCCAAACAACC
AACCGACCAACCAACCATGGTTCATGCCTTATGGCCCCATATGAAAGCAA
ACATGGGAACACAGCTCAATTCAAATTCTACCCATAAATAAGTCTAGTTA
CC back to topCoding sequence (CDS) from alignment at ch8:1457842..1460443+ >KJC3_011734-T3 ID=KJC3_011734-T3|Name=KJC3_011734-T3|organism=Aspergillus niger KJC3|type=CDS|length=7203bp|location=Sequence derived from alignment at ch8:1457842..1460443+ (Aspergillus niger KJC3) ATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTAT ATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGG CTGTTTCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATC ACCTGGCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGA TTCGAGTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACC TGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAAT GGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGA GTTGAACGACAATGGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGA TCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTT GTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCC ACTAAGTGTATATGCAGCCACCGAAGATGACGAATATAGGAAACCCAGGA CAGGTCTATGGAAAGAGATGCTGGACGACTACGACTTCGATGTGTCAGGA GTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAA CGACCATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTT TCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTG GAACCGTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACCGACGATGT GGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCG GCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCG TTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACCGTACGTCTTCT TTATTGTCTCTACCAAACTTTATACGGGTTACCTTCTTCCAACACACCCT TCTACGCCAAGCCCAAAAAGTCGCCCTAAATGGCCGGCGGTGGGGGCGTG AAACGTACAGCTTCCCCCACTCGAGCTATATCGCCGCCTCCACTCAAAAG GAAGGTTGAGTCTACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTACCC CGACATCTCAGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAACAAC AGTGCGGTCATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAGTAC AGAGAAGCCCAGAATCGCAGCATTTGACCTGGATTCAACGCTCGTCTCGA CAGCCTCTGGAAATACGTTCCCCAGGAATGGGTCAGACTGGAAGTGGTGG CATGATACGATACCTGGGAAGCTCAAGGAGTTGAACGACAATGGATACTA CGTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCA AGAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTG TCGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGCCAC CGAAGATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGC TGGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTT TTTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGACCG CGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGGAGTTCT TCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCGACAATT TACCTGCAAGCAGAGCCAACCGACGATGTGGCGCCACCTTTCTCTCGCCA GAGCCCCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCAAAT CCTCGTTCTACTGGGAATACCTGGAACCGTTGAAATACGAACGAGTCAAC CAAGACCTTCTTAAGACCGTACGTCTTCTTTATTGTCTCTACCAAACTTT ATACGGGTTACCTTCTTCCAACACACCCTTCTACGCCAAGCCCAAAAAGT CGCCCTAAATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACT CGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAAC TAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCG AACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTAT ACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGC ATTTGACCTGGATTCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCC CCAGGAATGGGTCAGACTGGAAGTGGTGGCATGATACGATACCTGGGAAG CTCAAGGAGTTGAACGACAATGGATACTACGTGGTGGTCGTAACGAATCA AAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTA AAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTG GACATCCCACTAAGTGTATATGCAGCCACCGAAGATGACGAATATAGGAA ACCCAGGACAGGTCTATGGAAAGAGATGCTGGACGACTACGACTTCGATG TGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGA CGGCCAAACGACCATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAA AGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGC CCCTCGTGGAACCGTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACC GACGATGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGAT ATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACC TGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTAAGACCGTA CGTCTTCTTTATTGTCTCTACCAAACTTTATACGGGTTACCTTCTTCCAA CACACCCTTCTACGCCAAGCCCAAAAAGTCGCCCTAAATGGCCGGCGGTG GGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTATATCGCCGCCTCCA CTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGGCTGTTTCCTCCTT CTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATCACCTGGCGGATTG TCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGATTCGAGTCACAAG AATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACCTGGATTCAACGCT CGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAATGGGTCAGACTGGA AGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGAGTTGAACGACAAT GGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAA AGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGG AGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCCACTAAGTGTATAT GCAGCCACCGAAGATGACGAATATAGGAAACCCAGGACAGGTCTATGGAA AGAGATGCTGGACGACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAG AGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAACGACCATTCCATG GTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGA GGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATC CGACAATTTACCTGCAAGCAGAGCCAACCGACGATGTGGCGCCACCTTTC TCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGGTGC GGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCGTTGAAATACGAAC GAGTCAACCAAGACCTTCTTAAGACCGTACGTCTTCTTTATTGTCTCTAC CAAACTTTATACGGGTTACCTTCTTCCAACACACCCTTCTACGCCAAGCC CAAAAAGTCGCCCTAAATGGCCGGCGGTGGGGGCGTGAAACGTACAGCTT CCCCCACTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGGTTGAGTCT ACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACATCTCAGAA AAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGCGGTCATTG GCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGAAGCCCAGA ATCGCAGCATTTGACCTGGATTCAACGCTCGTCTCGACAGCCTCTGGAAA TACGTTCCCCAGGAATGGGTCAGACTGGAAGTGGTGGCATGATACGATAC CTGGGAAGCTCAAGGAGTTGAACGACAATGGATACTACGTGGTGGTCGTA ACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAAGGCCAGAG CGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGCTGTCATGA AGCAACTGGACATCCCACTAAGTGTATATGCAGCCACCGAAGATGACGAA TATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCTGGACGACTACGA CTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGTAGGGGACG CTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGCGGATTTGCTCTT AATATCAAAGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTCAATGCTGA CCCCGAGCCCCTCGTGGAACCGTTCGATCCGACAATTTACCTGCAAGCAG AGCCAACCGACGATGTGGCGCCACCTTTCTCTCGCCAGAGCCCCCTCGAG CTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCGTTCTACTG GGAATACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGACCTTCTTA AGACCGTACGTCTTCTTTATTGTCTCTACCAAACTTTATACGGGTTACCT TCTTCCAACACACCCTTCTACGCCAAGCCCAAAAAGTCGCCCTAAATGGC CGGCGGTGGGGGCGTGAAACGTACAGCTTCCCCCACTCGAGCTATATCGC CGCCTCCACTCAAAAGGAAGGTTGAGTCTACCATAACTAAAAAGGCTGTT TCCTCCTTCTTTACCCCGACATCTCAGAAAAAGCCCGAACAGATCACCTG GCGGATTGTCAACAACAGTGCGGTCATTGGCAAGTATACTTCGGATTCGA GTCACAAGAATAGTACAGAGAAGCCCAGAATCGCAGCATTTGACCTGGAT TCAACGCTCGTCTCGACAGCCTCTGGAAATACGTTCCCCAGGAATGGGTC AGACTGGAAGTGGTGGCATGATACGATACCTGGGAAGCTCAAGGAGTTGA ACGACAATGGATACTACGTGGTGGTCGTAACGAATCAAAAGAAGATCAGT CTCAAGAAAGATCTCAAGAAAGGCCAGAGCGACTCTAAAAGCCTTGTCAA CTTCAAGGAGAGGGTGTCGGCTGTCATGAAGCAACTGGACATCCCACTAA GTGTATATGCAGCCACCGAAGATGACGAATATAGGAAACCCAGGACAGGT CTATGGAAAGAGATGCTGGACGACTACGACTTCGATGTGTCAGGAGTCAA TCTGTCAGAGTCCGTTTTTGTAGGGGACGCTGCTGGACGGCCAAACGACC ATTCCATGGTCGACCGCGGATTTGCTCTTAATATCAAAGTACCTTTCAAG ACGCCCGAGGAGTTCTTCCTCAATGCTGACCCCGAGCCCCTCGTGGAACC GTTCGATCCGACAATTTACCTGCAAGCAGAGCCAACCGACGATGTGGCGC CACCTTTCTCTCGCCAGAGCCCCCTCGAGCTGGTGATATTTTGCGGCAGC CCTGGTGCGGGCAAATCCTCGTTCTACTGGGAATACCTGGAACCGTTGAA ATACGAACGAGTCAACCAAGACCTTCTTAAGACCGTACGTCTTCTTTATT GTCTCTACCAAACTTTATACGGGTTACCTTCTTCCAACACACCCTTCTAC GCCAAGCCCAAAAAGTCGCCCTAAATGGCCGGCGGTGGGGGCGTGAAACG TACAGCTTCCCCCACTCGAGCTATATCGCCGCCTCCACTCAAAAGGAAGG TTGAGTCTACCATAACTAAAAAGGCTGTTTCCTCCTTCTTTACCCCGACA TCTCAGAAAAAGCCCGAACAGATCACCTGGCGGATTGTCAACAACAGTGC GGTCATTGGCAAGTATACTTCGGATTCGAGTCACAAGAATAGTACAGAGA AGCCCAGAATCGCAGCATTTGACCTGGATTCAACGCTCGTCTCGACAGCC TCTGGAAATACGTTCCCCAGGAATGGGTCAGACTGGAAGTGGTGGCATGA TACGATACCTGGGAAGCTCAAGGAGTTGAACGACAATGGATACTACGTGG TGGTCGTAACGAATCAAAAGAAGATCAGTCTCAAGAAAGATCTCAAGAAA GGCCAGAGCGACTCTAAAAGCCTTGTCAACTTCAAGGAGAGGGTGTCGGC TGTCATGAAGCAACTGGACATCCCACTAAGTGTATATGCAGCCACCGAAG ATGACGAATATAGGAAACCCAGGACAGGTCTATGGAAAGAGATGCTGGAC GACTACGACTTCGATGTGTCAGGAGTCAATCTGTCAGAGTCCGTTTTTGT AGGGGACGCTGCTGGACGGCCAAACGACCATTCCATGGTCGACCGCGGAT TTGCTCTTAATATCAAAGTACCTTTCAAGACGCCCGAGGAGTTCTTCCTC AATGCTGACCCCGAGCCCCTCGTGGAACCGTTCGATCCGACAATTTACCT GCAAGCAGAGCCAACCGACGATGTGGCGCCACCTTTCTCTCGCCAGAGCC CCCTCGAGCTGGTGATATTTTGCGGCAGCCCTGGTGCGGGCAAATCCTCG TTCTACTGGGAATACCTGGAACCGTTGAAATACGAACGAGTCAACCAAGA CCTTCTTAAGACCGTACGTCTTCTTTATTGTCTCTACCAAACTTTATACG GGTTACCTTCTTCCAACACACCCTTCTACGCCAAGCCCAAAAAGTCGCCC TAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011734-T3.utr5p1 | KJC3_011734-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036412 |
DBxref | InterPro:IPR006551 |
DBxref | InterPro:IPR023214 |
DBxref | InterPro:IPR013954 |
DBxref | InterPro:IPR006549 |
DBxref | PFAM:PF08645 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1457842..1460443 + |
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