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KJC3_011738-T1, KJC3_011738-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011738-T1
Unique NameKJC3_011738-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1471646..1473474-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011738-T1 ID=KJC3_011738-T1|Name=KJC3_011738-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1829bp|location=Sequence derived from alignment at ch8:1471646..1473474- (Aspergillus niger KJC3)
CGTCAACCGGCCTATCCCTTATCAATCCATCTGCATATTCACCCTTTCGG
GTCATTAACCTGTTTTTCTGAGACCCCGGGGATCTCGTTTCGACTTCGCT
TTGCTTTTTGGTCTCCCTGATTGCCTTACATCATGAACGGCGCCAGCGAT
CCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAGGAGCCTGCTCGAGCT
CCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCATGGGGATCAAGGATT
TGCAACGAGAGTTCGATATCTCTGAAGAGAACATCAAGGCGCTGCAAAGC
GTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCTGGATGAGGAGAGATG
TATGTTCATCCCTATTTCTCCCCAATATAACCTCGACTCCGGGCAGATCC
TTGTCCATCGTCTGTCGTTCTCTTTGCCGGTATGTGGCTGACCTGATCCA
GTCATTGTCAAGGCATCATCCGGACCGCGTTATGTCGTCGGTTGCCGCTC
GAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTGTCGCCCTCGATA
TGACCACACTTACTATAATGAGAATGCTCCCGAGAGAGGTTGATCCGTTG
GTATACAACATGTCACTGGAGGACCCAGGCCAGATCAACTTTGCAGGCAT
TGGTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAGTTATCGAGTTGC
CGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATCAAGCCGCCCAAG
GGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGACGTTGTTGGCACG
AGCAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAGGTATACATAATC
AACTCCGGGCGCGGGCTTAGGTAGGCCTAGATCGCTAACTTCATCCTAGT
TGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCGCGGTTAA
TAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCATCTTC
ATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTTC
GGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCAGCTGG
ATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGAATCGG
CCTGATACGCTTGACCCGGCTCTGCTGCGAGCGGGTCGTCTCGACCGCAA
GATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAGA
TCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGAGTGTG
GTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTCGTTAC
GGAAGCGTATGTCTATTTCCCGTTGTTGCTCTGCCATTTTTATTACATGA
CTAGGACTAATTCGGAGACAGTGGTCTATTTGCTATCAAGGATTACCGGG
ACGCGATCAACCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAG
GCGAAGAAGCTGGAGGGCAAGCTGGAATACCAGAAGTTGTAGTGCCCGCT
TGATTGAATACCTGAGAATTAGCCATGATGTAGAAAGCTATTATTTCCAA
CTTATGGGAAGCCCACCCCCAATCTACTTATGCTCATATAATGTACACAA
TCCATGCATTGATAATGCCGTGCAGTTTGCAGCTTTGTACTCCGGTTAGT
AGAATTAAGTGGTAGCCCAGATCATCACATGGGGGAATTACCCCACAGAC
TAGGCAAAGAAGGTGCATGGACCCGAGCATTGGACCCTGACCGGGTAAAC
ATAATGTTCTGCCATGCGTTGAAACTGAC
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Coding sequence (CDS) from alignment at ch8:1471646..1473474-

>KJC3_011738-T1 ID=KJC3_011738-T1|Name=KJC3_011738-T1|organism=Aspergillus niger KJC3|type=CDS|length=4728bp|location=Sequence derived from alignment at ch8:1471646..1473474- (Aspergillus niger KJC3)
TGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACT
TCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAG
CTGGAATACCAGAAGTTGTAGTTGTCTCGTCCGCTATTGTCGACAAATAC
ATCGGTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGA
ACACGAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAA
GACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTG
ATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAA
GATCATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGC
GAGCGGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTC
GGTCGCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGG
CGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTG
CTGATCTTCGCAACGTCGTTACGGAAGCTCATTGTCAAGGCATCATCCGG
ACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAA
AGCAGGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGA
ATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGA
CCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCC
GCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTC
CAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCC
GGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGA
CCAACTTCCTGAAAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGC
GCTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCA
AGCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGAT
ATCTCTGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGG
AGAAGTGTTGAAGCAGCTGGATGAGGAGAGATTGGTCTATTTGCTATCAA
GGATTACCGGGACGCGATCAACCAGGATGACTTCAACAGAGCGGTCCGCA
AGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCAGAAGTTG
TAGTTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCGCGG
TTAATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCAT
CTTCATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGTA
CTTCGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCAG
CTGGATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGAA
TCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGCGGGTCGTCTCGACC
GCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTTG
AAGATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGAG
TGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTCG
TTACGGAAGCTCATTGTCAAGGCATCATCCGGACCGCGTTATGTCGTCGG
TTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTGTCG
CCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAGAGAGGTT
GATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGATCAACTT
TGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAGTTA
TCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATCAAG
CCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGACGTT
GTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAGATG
AACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAG
GAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCA
TGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAACATC
AAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCT
GGATGAGGAGAGATTGGTCTATTTGCTATCAAGGATTACCGGGACGCGAT
CAACCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGA
AGCTGGAGGGCAAGCTGGAATACCAGAAGTTGTAGTTGTCTCGTCCGCTA
TTGTCGACAAATACATCGGTGAATCTGCGCGGTTAATAAGAGAGATGTTC
GGATACGCCAAAGAACACGAGCCTTGCATCATCTTCATGGACGAAATCGA
CGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAAA
TCCAGCGTACATTGATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTAC
CTTGGAAAGACGAAGATCATCATGGCCACGAATCGGCCTGATACGCTTGA
CCCGGCTCTGCTGCGAGCGGGTCGTCTCGACCGCAAGATCGAGATTCCCC
TGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAGATCCACTCCAGCACC
GTTCAACTGGATGGCGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTGA
CGGACTCAACGGTGCTGATCTTCGCAACGTCGTTACGGAAGCTCATTGTC
AAGGCATCATCCGGACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGA
TAAGGCAAAGCTAAAGCAGGGCACCCGTGTCGCCCTCGATATGACCACAC
TTACTATAATGAGAATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAAC
ATGTCACTGGAGGACCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCT
GAACGAACAGATCCGCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGA
ACCCCGAGCTTTTCCAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTC
CTCTACGGTCCTCCGGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGC
AAGCTCAATGGAGACCAACTTCCTGAAAGATGAACGGCGCCAGCGATCCG
GAGAGAGAGCAGGCGCTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCG
AGAATGGGAAGCCAAGCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGC
AACGAGAGTTCGATATCTCTGAAGAGAACATCAAGGCGCTGCAAAGCGTC
GGCCAGATCATCGGAGAAGTGTTGAAGCAGCTGGATGAGGAGAGATTGGT
CTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAA
CAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGG
AATACCAGAAGTTGTAGTTGTCTCGTCCGCTATTGTCGACAAATACATCG
GTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACAC
GAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGACG
TTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGG
AGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATC
ATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGC
GGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTC
GCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAG
ATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGA
TCTTCGCAACGTCGTTACGGAAGCTCATTGTCAAGGCATCATCCGGACCG
CGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCA
GGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGC
TCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCA
GGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGA
GCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAA
GAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGT
ACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAA
CTTCCTGAAAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTC
GAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCT
CAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCT
CTGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAA
GTGTTGAAGCAGCTGGATGAGGAGAGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT4KJC3_011738Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011738-T1KJC3_011738-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011738-T1.cdsKJC3_011738-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011738-T1.utr3p1KJC3_011738-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011738-T1.exon4KJC3_011738-T1.exon4Aspergillus niger KJC3exon
KJC3_011738-T1.exon3KJC3_011738-T1.exon3Aspergillus niger KJC3exon
KJC3_011738-T1.exon2KJC3_011738-T1.exon2Aspergillus niger KJC3exon
KJC3_011738-T1.exon1KJC3_011738-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011738-T1.utr5p1KJC3_011738-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S proteasome subunit rpt4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1471646..1473474 -
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