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KJC3_011740-T1, KJC3_011740-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011740-T1
Unique NameKJC3_011740-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1477044..1478106+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011740-T1 ID=KJC3_011740-T1|Name=KJC3_011740-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1063bp|location=Sequence derived from alignment at ch8:1477044..1478106+ (Aspergillus niger KJC3)
ATGGCTCCTTCAAAGTGGGGTATGTCCTCTTTTGGAGATTTTTGTGGCCC
TCGCCCGCAATAGGGACATACATTGCGGGACAACATGGCGAATCATTCAC
GATACTGACGGCTTCTTTCAGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTGAG
TTTTTGCCGCCCCTCCCCCCTCCTTTTCCATTTTTGCCTCACAATTTGCC
CCGCGCTGTTTCTCTTGGCCTCAGTCGCTGAAAACTCGCGCCCCCCCCCC
CCCCCCCCCCCCCCATCATTTTTTCCCCCGTCCACGATCTGACCGAATGA
ACTAGGTCCTCGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGT
GAGAAGGCCGCCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGC
CGCCGCCAACAAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCC
AGCGGAAGGCAGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGAC
GAGGCCGAGCGGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCT
TAAGCACGCCGAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCA
ACCGCAGCGCCCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACC
CAGGCCGTCGATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGA
CCAGTTCACCCGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGT
CGAAGAAGCCCCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTC
GTCAAGGACCTGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGAC
TACTCTCAGCAATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTA
ACAAGAAGACCAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGA
GAGAACAAGATTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGA
TGACTTCATGTGA
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Coding sequence (CDS) from alignment at ch8:1477044..1478106+

>KJC3_011740-T1 ID=KJC3_011740-T1|Name=KJC3_011740-T1|organism=Aspergillus niger KJC3|type=CDS|length=2403bp|location=Sequence derived from alignment at ch8:1477044..1478106+ (Aspergillus niger KJC3)
ATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCTCC
TGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCTCG
ACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGCC
AAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACAA
GAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCAG
ATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCGG
AGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCGA
GGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCCC
CCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGAT
CTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCCG
CGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCCC
AGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCTG
CCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCAA
TGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACCA
AGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGATT
GAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGTG
AATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCTC
CTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCTC
GACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCGC
CAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAACA
AGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGCA
GATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGCG
GAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCCG
AGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGCC
CCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCGA
TCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACCC
GCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCCC
CAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACCT
GCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGCA
ATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGACC
AAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGAT
TGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATGT
GAATGGCTCCTTCAAAGTGGGATGACGAAGAAGAGAGTGTCTCTCCCCCT
CCTGTGGTTGCCCGCCGCAAGTTCGACGACGAGGAAGAGGAAGATGTCCT
CGACTCCTGGGACGCCGCCGAAGATTCCGAAGTAGAGCGTGAGAAGGCCG
CCAAGGCAGCGGAGGCCAAGGCTAAGGCCGAAGCCGAAGCCGCCGCCAAC
AAGAAGAGCAAGGCACAGCGGATACAGGAAAAGAAGGCCCAGCGGAAGGC
AGATGCCGATGCTGAGGATTCGGACGACAGCGACGAGGACGAGGCCGAGC
GGAGAGCCCGTCTCCGCAAGACGGAGAAGGACGCTGACCTTAAGCACGCC
GAGGACCTGTTCGGCGACATCGACCTGAACCGTATGCGCAACCGCAGCGC
CCCCAAGGCCGTTGTCATCAGTGACGGGACCGACCCGACCCAGGCCGTCG
ATCTGTCGGCTATGCCTCTCTTCAAGCCCGCCACCAAGGACCAGTTCACC
CGCGTTACGACCACCCTTATCCCTCTGTTGACGACCCAGTCGAAGAAGCC
CCAGTATGCTCTGTGGGCGCAGGACTTCATCAAGCAGCTCGTCAAGGACC
TGCCCAGCGGTGATGTCAAAAAGATCGCTTCCTCGCTGACTACTCTCAGC
AATGAGAAGATGAAGGAGGAGCGTGCTGCCGATAAGGGTAACAAGAAGAC
CAAGGCGGCCAAGACCAAGGTCTCTCTGGTCACCTCTAGAGAGAACAAGA
TTGAAACCAACTCTTATGATGATGATGGGTTGGATGACGATGACTTCATG
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HCR1KJC3_011740Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011740-T1.exon1KJC3_011740-T1.exon1Aspergillus niger KJC3exon
KJC3_011740-T1.exon2KJC3_011740-T1.exon2Aspergillus niger KJC3exon
KJC3_011740-T1.exon3KJC3_011740-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011740-T1.cdsKJC3_011740-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011740-T1KJC3_011740-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013906
DBxrefInterPro:IPR023194
DBxrefPFAM:PF08597
ProductTranslation initiation factor 3 subunit J component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1477044..1478106 +
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