You are here

KJC3_011747-T1, KJC3_011747-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011747-T1
Unique NameKJC3_011747-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1498938..1499954-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011747-T1 ID=KJC3_011747-T1|Name=KJC3_011747-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1017bp|location=Sequence derived from alignment at ch8:1498938..1499954- (Aspergillus niger KJC3)
CTGAAATCTGTTGGCTCGACCCCAGTCGTTCTTTCTTCACTTGATTCATG TGTCACATTCCCTCCACTTCCACCACTTCTTCTACTTTTTCTACTTCCTC TTGTTTCTCTTCTTCCTCCTCCCCTTCTTCTTCATCCACTTCATTCTCCT CTCGCCATCTTTTGAAAACTCCAGTCGTCTTTCCATCCACCAACATCTCT CTATCTCAATTTACACCCTGCTAGCAAATCTCGAAAGGCATCATGAAGCT CTACCACGTTACCTTAACCCTCTTCGCTGGCCTAGGCTTGGTAGTTGGCC AGGGGATGGACAGTCTTCCACCCTGCGCGGTAAGGCTTTGTTACGGCAAC TTGTCTGCTCAAGTATTGCTCGTTATATATAGCTGACCCGATTATAGAGA GACTGCGCCACCGGTTCTATCCCCAAAACTTGCAAGGCTATTGATGTGAA CTGCATCTGCTCTGACAAGTCCTTCATCACTGGTATTTCATGCTGCGTTG CTTCGACCTGCTCTGCGGAGGACCAGACCTGTATGTCGAATCTCCCTTTC CCAATACCAAACCCCCCTTTTCTTGGCCGCGTGATACATGACATCAGCTC GGCTTTAATGGCAGCTTCTAATGGATTAATCGTGTTCCAGCTGCCCTCAA TTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTCCCCAAGA GCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCAAACCACG GGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTGCAGCTAA CGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAATGCTACCA AAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTACTGCAACT GATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTGGTATGAT CTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCAGCCTTCT ATGCCTTGCTTCTTTAG
back to top

Coding sequence (CDS) from alignment at ch8:1498938..1499954-

>KJC3_011747-T1 ID=KJC3_011747-T1|Name=KJC3_011747-T1|organism=Aspergillus niger KJC3|type=CDS|length=1791bp|location=Sequence derived from alignment at ch8:1498938..1499954- (Aspergillus niger KJC3)
CTGCCCTCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGAT
CTCCCCAAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTT
GCAAACCACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTG
GTGCAGCTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCA
AATGCTACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGC
TACTGCAACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGG
CTGGTATGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGG
GCAGCCTTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTAT
CCCCAAAACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGT
CCTTCATCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAG
GACCAGACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCC
TAGGCTTGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCGCTG
CCCTCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTC
CCCAAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCA
AACCACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTG
CAGCTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAAT
GCTACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTAC
TGCAACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTG
GTATGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCA
GCCTTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTATCCC
CAAAACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGTCCT
TCATCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAGGAC
CAGACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCCTAG
GCTTGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCGCTGCCC
TCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTCCCC
AAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCAAAC
CACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTGCAG
CTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAATGCT
ACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTACTGC
AACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTGGTA
TGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCAGCC
TTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTATCCCCAA
AACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGTCCTTCA
TCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAGGACCAG
ACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCCTAGGCT
TGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011747KJC3_011747Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011747-T1KJC3_011747-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011747-T1.cdsKJC3_011747-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011747-T1.exon3KJC3_011747-T1.exon3Aspergillus niger KJC3exon
KJC3_011747-T1.exon2KJC3_011747-T1.exon2Aspergillus niger KJC3exon
KJC3_011747-T1.exon1KJC3_011747-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011747-T1.utr5p1KJC3_011747-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR008427
DBxrefPFAM:PF05730
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1498938..1499954 -