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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1498938..1499954- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011747-T1 ID=KJC3_011747-T1|Name=KJC3_011747-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1017bp|location=Sequence derived from alignment at ch8:1498938..1499954- (Aspergillus niger KJC3) CTGAAATCTGTTGGCTCGACCCCAGTCGTTCTTTCTTCACTTGATTCATG
TGTCACATTCCCTCCACTTCCACCACTTCTTCTACTTTTTCTACTTCCTC
TTGTTTCTCTTCTTCCTCCTCCCCTTCTTCTTCATCCACTTCATTCTCCT
CTCGCCATCTTTTGAAAACTCCAGTCGTCTTTCCATCCACCAACATCTCT
CTATCTCAATTTACACCCTGCTAGCAAATCTCGAAAGGCATCATGAAGCT
CTACCACGTTACCTTAACCCTCTTCGCTGGCCTAGGCTTGGTAGTTGGCC
AGGGGATGGACAGTCTTCCACCCTGCGCGGTAAGGCTTTGTTACGGCAAC
TTGTCTGCTCAAGTATTGCTCGTTATATATAGCTGACCCGATTATAGAGA
GACTGCGCCACCGGTTCTATCCCCAAAACTTGCAAGGCTATTGATGTGAA
CTGCATCTGCTCTGACAAGTCCTTCATCACTGGTATTTCATGCTGCGTTG
CTTCGACCTGCTCTGCGGAGGACCAGACCTGTATGTCGAATCTCCCTTTC
CCAATACCAAACCCCCCTTTTCTTGGCCGCGTGATACATGACATCAGCTC
GGCTTTAATGGCAGCTTCTAATGGATTAATCGTGTTCCAGCTGCCCTCAA
TTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTCCCCAAGA
GCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCAAACCACG
GGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTGCAGCTAA
CGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAATGCTACCA
AAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTACTGCAACT
GATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTGGTATGAT
CTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCAGCCTTCT
ATGCCTTGCTTCTTTAG back to topCoding sequence (CDS) from alignment at ch8:1498938..1499954- >KJC3_011747-T1 ID=KJC3_011747-T1|Name=KJC3_011747-T1|organism=Aspergillus niger KJC3|type=CDS|length=1791bp|location=Sequence derived from alignment at ch8:1498938..1499954- (Aspergillus niger KJC3) CTGCCCTCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGAT CTCCCCAAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTT GCAAACCACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTG GTGCAGCTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCA AATGCTACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGC TACTGCAACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGG CTGGTATGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGG GCAGCCTTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTAT CCCCAAAACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGT CCTTCATCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAG GACCAGACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCC TAGGCTTGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCGCTG CCCTCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTC CCCAAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCA AACCACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTG CAGCTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAAT GCTACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTAC TGCAACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTG GTATGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCA GCCTTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTATCCC CAAAACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGTCCT TCATCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAGGAC CAGACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCCTAG GCTTGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCGCTGCCC TCAATTTTGCACAGCAGATCTGCGGTGGCGCCGGCGTAACTGATCTCCCC AAGAGCGCTAGTTGCACGAGTGGGAACACCGCGAGTGCTACTTTGCAAAC CACGGGCACAACTACTGGTGCTTCTGCGACTACTACCTCGACTGGTGCAG CTAACGGAACCCGTCTCGACTCATCCAGCTCTGCCAGCGCGGCAAATGCT ACCAAAACGGGAAGCAACACTCAGTCCGTGAAGACGCAGGGCGCTACTGC AACTGATAAAAATGCCGCAAGTAATGCGACTGCTAGCAGTGCGGCTGGTA TGATCTTGGGAGATAGCAGTGCTGGCCTTGCTGCAATCCTCGGGGCAGCC TTCTATGCCTTGCTTCTTTAGAGAGACTGCGCCACCGGTTCTATCCCCAA AACTTGCAAGGCTATTGATGTGAACTGCATCTGCTCTGACAAGTCCTTCA TCACTGGTATTTCATGCTGCGTTGCTTCGACCTGCTCTGCGGAGGACCAG ACCTATGAAGCTCTACCACGTTACCTTAACCCTCTTCGCTGGCCTAGGCT TGGTAGTTGGCCAGGGGATGGACAGTCTTCCACCCTGCGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011747-T1.utr5p1 | KJC3_011747-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-19) |
DBxref | InterPro:IPR008427 |
DBxref | PFAM:PF05730 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1498938..1499954 - |
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