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KJC3_011765-T1, KJC3_011765-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011765-T1
Unique NameKJC3_011765-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1547927..1549444-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011765-T1 ID=KJC3_011765-T1|Name=KJC3_011765-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1518bp|location=Sequence derived from alignment at ch8:1547927..1549444- (Aspergillus niger KJC3)
TTAACCATCGTACTTTACCTCGATTCTTCTGTCTCAATCACACGGCAGTA
GAGAGCTCCTCCTGTCGTCTACTCACCATGGCCGCTCCCGAAGCTCATCA
CCTCTTCCACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGA
CCCTTGCAGTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGC
AACAAGTTCTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGAC
TGGTGTGGATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGG
GTAAGTTAACCCCCTCTCCCTTGTCCTGCAATAGTTCCGTCTAAGTGACC
ACGGGAACAGACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTG
GAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTAC
GGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTG
ATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCA
CTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAA
ACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTT
TCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGG
TGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGG
CGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCC
TTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGA
ACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCA
ACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACGTA
TGTCTTCTAAACAATCAATTTCAGCAGATGATCCAGTACGACACGTGTCG
CTAACAGGAATTAACAGGATTGCGAACCGTACCGCCTTCGCGGTGACGAG
AACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGC
TGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATC
TTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAAT
ACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAA
GTTCAGCAGTAAGAGATGCTCCCCTGCTAAGTTGTCCTGTGGGTTGCGCT
AACATCTAGATAATAGCGAGCGGAGTCGATGGCCGTGTTGTTATCTGGAC
CATCTAGACAATTACATATTGTGCTAGATGCGTTCTTAGCACAGAGGTTC
TAGCAAATTGAATGCAATGGACCCTTTACTGCATCACGAGAATATGGAGT
TTGGAAAATAGCTTCAGGTAGATAGATTCTGCCCATTCGATGTATACATT
ATAAATATCAAGGGCACT
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Coding sequence (CDS) from alignment at ch8:1547927..1549444-

>KJC3_011765-T1 ID=KJC3_011765-T1|Name=KJC3_011765-T1|organism=Aspergillus niger KJC3|type=CDS|length=4368bp|location=Sequence derived from alignment at ch8:1547927..1549444- (Aspergillus niger KJC3)
CGAGCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAA
CCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCAT
TGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTC
TTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACC
CAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGA
GGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCT
GGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATA
AACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCGC
TGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGA
ATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATT
ACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGAC
TGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGC
GCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGT
GGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTC
TCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCG
TCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATC
GCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGA
GATCATCGCCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCC
ACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCA
GTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTT
CTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGG
ATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGA
GTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCG
CCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCA
AGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATG
TTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAA
GACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCG
ATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGG
ACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGC
TGCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGAT
CTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGG
TGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCT
TGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCC
ATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAG
CCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATT
CTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTG
GAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATAT
CCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCG
TCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCG
CCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCA
ATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCG
GGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGA
CCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCT
CCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGG
CCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCG
GTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGG
CCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCA
AATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGC
ATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTC
GTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCAC
GGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACAT
TTGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCT
CGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTC
GAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGC
ATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGG
GTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGC
CTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATG
ACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCG
CTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGC
GCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGC
CTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGC
CACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGA
TCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACA
ATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAA
CTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAG
TGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGGCCGTGTTG
TTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCGGTGACGAG
AACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGC
TGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATC
TTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAAT
ACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAA
GTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGA
AGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGG
TGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGAT
CGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACT
TGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAAC
TCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTC
TAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTG
AACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCG
GGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTT
TACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAAC
AGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAAC
AGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACATGGC
CGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTT
TCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAG
CTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGG
CCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTA
TCGTTACTTGTTCTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011765KJC3_011765Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011765-T1KJC3_011765-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011765-T1.cdsKJC3_011765-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011765-T1.utr3p1KJC3_011765-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011765-T1.exon4KJC3_011765-T1.exon4Aspergillus niger KJC3exon
KJC3_011765-T1.exon3KJC3_011765-T1.exon3Aspergillus niger KJC3exon
KJC3_011765-T1.exon2KJC3_011765-T1.exon2Aspergillus niger KJC3exon
KJC3_011765-T1.exon1KJC3_011765-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011765-T1.utr5p1KJC3_011765-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262VPD
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR017383
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1547927..1549444 -
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