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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1550504..1552010- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011767-T1 ID=KJC3_011767-T1|Name=KJC3_011767-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1507bp|location=Sequence derived from alignment at ch8:1550504..1552010- (Aspergillus niger KJC3) TTTTCATTATCGGTGTATCATAGATGGGTCTAAGATCCAGAGATTGAACC
CCCTTTGAGTCAGGTCATCTCCGATTGAGTCCTTCTTGATTCCGTGGTTC
CATCTTTTACTGCTTTGGAAACCTTTCCCGTTCCGGCGCTCGGCTCGCTC
CCTCCTGGTCGGGTCATCCGAAAGCTCCAGCTAGACTAGTACTACTATCT
ACTGACTCGATACACATCCCACCCGCAGCTGCGACGTAAAACAGCTGCAA
GCAAGAAGGGAGGGTTTCTAACCCGAGAACGGACTGGTTAGTCAACCCAC
ATCCCTCACGAACTGGATCGCTGTCCTCTGGGGCGTACAGAACCAGTGTT
TCTGCAACGCAGACGCTTCTGCAGCGCTTGTCTGTCGGTCAGTGATCGGA
TTACACCGCGTCTTTACCAGTCGTATGGCGTCTTCTCTTTCGAGTCAACG
GACCTTATCGGGGTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCCT
GTCACGCCTTTCTAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGA
TGGTCCTCCATCCGTCTCGATCAGCGGGTAAGTTAGTTGCCTCGCTTCAG
GTCGTTCGGCTTTGTTCCACCCTCCTTCTCTTGTTGGCTGTCGCTTGAGG
GAAAGAATCATGGGAATCTGCGCGACAGTGATTGGAACATTGGCTAGGAA
GATGGCCTGAACTATACACATCAATCCTTTTCCCCTTTCTTTTTTTCCCC
CCCTCCTCTTCACCCTCCCCCTGCTACACCCCACTCCTAGCTAAATCCAT
TAGGCAACCGGGCCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGG
TACTCGTGATCGCGACGAGCCCCTCCCGGACCCAGAGATGAACGAAGAAC
TACAGTGGAAGGCCTCGGAAGAAGATCCCGTCCGTCGAGCTGGAACCCTT
TCCATTCCGCTCTCAATTTTAAAAGTATCGTCTAACATCAAACAGGAAGC
TCTCATTCGTGCGCCCGAGACCAGTGTCCATTTACAGGTGATTTATAATA
TTCTGCTTTCTCCCACGTACCACGTCCCTGTCTTGTATTTCCAGTTACGG
CAGGACAACCATCCGGGGCCGCTGGGAATTGACGCAGTCTACCAATACCT
GGTACCGGAACAGTACAGAAAGGAACTCCAGAGCATTGGCATCATGGGTG
GTATTAGTTTTGGCGTATGTGCAAGTTCTCGAATCCCTAGCCCAAGCTGG
AGCTTATGCTTCGTAGTATCGTCCAGACTCCGGAACTCCAGCATTTTTCG
TTCATCCATGCCAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTC
TGTCTCACTCCCGAGATTTATCTCATAATCTGGCTCGGGTTGGTGGGTAA
CCGTCTCGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGG
AGACATTCCAAGGCACTGCGTGACTAAGTTTAAATCGATCCAAGAGTACT
TCCTCCC back to topCoding sequence (CDS) from alignment at ch8:1550504..1552010- >KJC3_011767-T1 ID=KJC3_011767-T1|Name=KJC3_011767-T1|organism=Aspergillus niger KJC3|type=CDS|length=2820bp|location=Sequence derived from alignment at ch8:1550504..1552010- (Aspergillus niger KJC3) TATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTTCATCCATGCCAAAC AACGGATGCGATGAGGCACATTGCAGGACAGCTCTGTCTCACTCCCGAGA TTTATCTCATAATCTGGCTCGGGTTGGTGGGTAACCGTCTCGGTCTTCAG CTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAGACATTCCAAGGCAC TGCGTGAGAAGCTCTCATTCGTGCGCCCGAGACCAGTGTCCATTTACAGG TGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGTCTTGTAT TTCCAGTTACGGCAGGACAACCATCCGGGGCCGCTGGGAATTGACGCAGT CTACCAATACCTGGTACCGGAACAGTACAGAAAGGAACTCCAGAGCATTG GCATCATGGGTGGTATTAGTTTTGGCGCAACCGGGCCCATCTTGAGTATT GCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCCCTCCC GGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGAAGATC CCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTCCTTTA CTCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTCTAGGTCGGGT TCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCTCGATC AGCGGTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTTCATCCATGC CAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTCTGTCTCACTCC CGAGATTTATCTCATAATCTGGCTCGGGTTGGTGGGTAACCGTCTCGGTC TTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAGACATTCCAA GGCACTGCGTGAGAAGCTCTCATTCGTGCGCCCGAGACCAGTGTCCATTT ACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCCTGTCT TGTATTTCCAGTTACGGCAGGACAACCATCCGGGGCCGCTGGGAATTGAC GCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGAACTCCAGAG CATTGGCATCATGGGTGGTATTAGTTTTGGCGCAACCGGGCCCATCTTGA GTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACGAGCCC CTCCCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCGGAAGA AGATCCCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGGGTTTC CTTTACTCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTCTAGGT CGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATCCGTCT CGATCAGCGGTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGTTCATC CATGCCAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTCTGTCTC ACTCCCGAGATTTATCTCATAATCTGGCTCGGGTTGGTGGGTAACCGTCT CGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGAGACAT TCCAAGGCACTGCGTGAGAAGCTCTCATTCGTGCGCCCGAGACCAGTGTC CATTTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCACGTCCC TGTCTTGTATTTCCAGTTACGGCAGGACAACCATCCGGGGCCGCTGGGAA TTGACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGGAACTC CAGAGCATTGGCATCATGGGTGGTATTAGTTTTGGCGCAACCGGGCCCAT CTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCGCGACG AGCCCCTCCCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGGCCTCG GAAGAAGATCCCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTATCGGG GTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCCTGTCACGCCTTTC TAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCTCCATC CGTCTCGATCAGCGGTATCGTCCAGACTCCGGAACTCCAGCATTTTTCGT TCATCCATGCCAAACAACGGATGCGATGAGGCACATTGCAGGACAGCTCT GTCTCACTCCCGAGATTTATCTCATAATCTGGCTCGGGTTGGTGGGTAAC CGTCTCGGTCTTCAGCTGCCAAAGGAACTCTTCACAGTCGAAGGCATGGA GACATTCCAAGGCACTGCGTGAGAAGCTCTCATTCGTGCGCCCGAGACCA GTGTCCATTTACAGGTGATTTATAATATTCTGCTTTCTCCCACGTACCAC GTCCCTGTCTTGTATTTCCAGTTACGGCAGGACAACCATCCGGGGCCGCT GGGAATTGACGCAGTCTACCAATACCTGGTACCGGAACAGTACAGAAAGG AACTCCAGAGCATTGGCATCATGGGTGGTATTAGTTTTGGCGCAACCGGG CCCATCTTGAGTATTGCAAGGGATATCGGTCATGTGGGTACTCGTGATCG CGACGAGCCCCTCCCGGACCCAGAGATGAACGAAGAACTACAGTGGAAGG CCTCGGAAGAAGATCCCATGGCGTCTTCTCTTTCGAGTCAACGGACCTTA TCGGGGTTTCCTTTACTCACTGCCGAGGAATTTGAAACCGCCTGTCACGC CTTTCTAGGTCGGGTTCACGTGGTGGATGATAGCAAGGTGGGATGGTCCT CCATCCGTCTCGATCAGCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011767-T1.utr3p1 | KJC3_011767-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011767-T1.utr5p1 | KJC3_011767-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR007135 |
DBxref | PFAM:PF03987 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1550504..1552010 - |
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