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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1562146..1563161- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011772-T1 ID=KJC3_011772-T1|Name=KJC3_011772-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1016bp|location=Sequence derived from alignment at ch8:1562146..1563161- (Aspergillus niger KJC3) TTTCCTTCTCAAGCATCACTTTGGATCTTCACAACCAAGCCCCATTTTCC
GGCCTACTCAGTGATAATAAAAACTATCATTCATTCTCATATTGTGCCAA
TCGCCCGTCATGAATCACTTTCCCGAAGCTTGGGGTCGCGTAAGAGCATC
ATCATCATCGCATTAGATTATTTATGTCGCTAACAAGTTGCTGAAAGCCT
AGGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGG
TCCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGG
CAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGGTATA
GCTGGGAATTAGATTGGAAATCCATTTCGCACTTTCACTGACGGATATTC
TTTTTTTATAGCATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAAC
GTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTT
TCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATCAGAGA
AAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTT
ATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGG
AACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAG
TTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCG
GCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAG
GAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAG
GGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGT
ACTCCTTAGCTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAG
CAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGG
GGCTCAGGTTAACTAG back to topCoding sequence (CDS) from alignment at ch8:1562146..1563161- >KJC3_011772-T1 ID=KJC3_011772-T1|Name=KJC3_011772-T1|organism=Aspergillus niger KJC3|type=CDS|length=2349bp|location=Sequence derived from alignment at ch8:1562146..1563161- (Aspergillus niger KJC3) CATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAACGTCTTCGCAAG TTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATGCA GTATATCGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTCTA CCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGAAA GTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATCTT GGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGATC TGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTGCC CATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCT CGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTATCA AGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAGCT GTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAAGC CCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGGGGCTCAGGTTA ACTAGCCTAGGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAG ACAACTGGTCCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTC GGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACC TAGATGAATCACTTTCCCGAAGCTTGGGGTCGCCATCATACGGGTCTCTT GCCCGCTTCACTGATGTGAAACGTCTTCGCAAGTTTGGCGATTCTGCCAT CATCGGATTCAGTGGTGACGTTTCGGATATGCAGTATATCGACCGACTAC TGGAGTCCATCGATATCAGAGAAAATTACTCTACCCACGGAAACACGTTG AACGCCAAGAACCTTCATACTTATTTGTCGAAAGTTTTCTACAAGCGCCG TTCTGAGTTCAACCCCCTCTGGAACCACATCTTGGTGGCCGGGTTTGATG GAGACAAGAAGCCATTCCTCAGTTCTGCGGATCTGCTGGGGACCACCTTC TCAGCTCCTCATCTCGCGACCGGCTTTGGTGCCCATCTTGCCGTTCCAAT CCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCTCGAGTCAATCACCAAGG ATGAGGCCGTGGCGGCGCTAAGGGAATGTATCAAGGTTCTCTGGTACCGT GATGCGCGGAGTCTGGACAAGTACTCCTTAGCTGTTATTACTGAGGAGGG AGTTGAGATTCAGGAGGACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCG CCGAAGCCATCAAGGGATATGGGGCTCAGGTTAACTAGCCTAGGGATGAC GTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAAC CCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGT TTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGATGAATCACTTTCC CGAAGCTTGGGGTCGCCATCATACGGGTCTCTTGCCCGCTTCACTGATGT GAAACGTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTG ACGTTTCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATC AGAGAAAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCA TACTTATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCC TCTGGAACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTC CTCAGTTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGC GACCGGCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCC CAGAGGAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCG CTAAGGGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGA CAAGTACTCCTTAGCTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGG ACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGA TATGGGGCTCAGGTTAACTAGCCTAGGGATGACGTTTACGGACCCTACAA CGCCTCATACCTCCAGACAACTGGTCCGAAAACCCACACTCAGTCACCTG CTGTGACTGGTACGTCGGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCA ATTGCTGCCGATAACCTAGATGAATCACTTTCCCGAAGCTTGGGGTCGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
Term | Definition |
GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004175 | endopeptidase activity |
GO:0004298 | threonine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011772-T1.utr5p1 | KJC3_011772-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09263XZN |
Note | MEROPS:MER0001711 |
DBxref | InterPro:IPR023333 |
DBxref | InterPro:IPR016050 |
DBxref | InterPro:IPR001353 |
DBxref | InterPro:IPR016295 |
DBxref | InterPro:IPR029055 |
DBxref | PFAM:PF00227 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1562146..1563161 - |
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