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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1562146..1563161- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011772-T1 ID=KJC3_011772-T1|Name=KJC3_011772-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1016bp|location=Sequence derived from alignment at ch8:1562146..1563161- (Aspergillus niger KJC3)
TTTCCTTCTCAAGCATCACTTTGGATCTTCACAACCAAGCCCCATTTTCC
GGCCTACTCAGTGATAATAAAAACTATCATTCATTCTCATATTGTGCCAA
TCGCCCGTCATGAATCACTTTCCCGAAGCTTGGGGTCGCGTAAGAGCATC
ATCATCATCGCATTAGATTATTTATGTCGCTAACAAGTTGCTGAAAGCCT
AGGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGG
TCCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGG
CAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGGTATA
GCTGGGAATTAGATTGGAAATCCATTTCGCACTTTCACTGACGGATATTC
TTTTTTTATAGCATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAAC
GTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTT
TCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATCAGAGA
AAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTT
ATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGG
AACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAG
TTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCG
GCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAG
GAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAG
GGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGT
ACTCCTTAGCTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAG
CAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGG
GGCTCAGGTTAACTAG back to topCoding sequence (CDS) from alignment at ch8:1562146..1563161- >KJC3_011772-T1 ID=KJC3_011772-T1|Name=KJC3_011772-T1|organism=Aspergillus niger KJC3|type=CDS|length=2349bp|location=Sequence derived from alignment at ch8:1562146..1563161- (Aspergillus niger KJC3)
CATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAACGTCTTCGCAAG
TTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATGCA
GTATATCGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTCTA
CCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGAAA
GTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATCTT
GGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGATC
TGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTGCC
CATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCT
CGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTATCA
AGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAGCT
GTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAAGC
CCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGGGGCTCAGGTTA
ACTAGCCTAGGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAG
ACAACTGGTCCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTC
GGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACC
TAGATGAATCACTTTCCCGAAGCTTGGGGTCGCCATCATACGGGTCTCTT
GCCCGCTTCACTGATGTGAAACGTCTTCGCAAGTTTGGCGATTCTGCCAT
CATCGGATTCAGTGGTGACGTTTCGGATATGCAGTATATCGACCGACTAC
TGGAGTCCATCGATATCAGAGAAAATTACTCTACCCACGGAAACACGTTG
AACGCCAAGAACCTTCATACTTATTTGTCGAAAGTTTTCTACAAGCGCCG
TTCTGAGTTCAACCCCCTCTGGAACCACATCTTGGTGGCCGGGTTTGATG
GAGACAAGAAGCCATTCCTCAGTTCTGCGGATCTGCTGGGGACCACCTTC
TCAGCTCCTCATCTCGCGACCGGCTTTGGTGCCCATCTTGCCGTTCCAAT
CCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCTCGAGTCAATCACCAAGG
ATGAGGCCGTGGCGGCGCTAAGGGAATGTATCAAGGTTCTCTGGTACCGT
GATGCGCGGAGTCTGGACAAGTACTCCTTAGCTGTTATTACTGAGGAGGG
AGTTGAGATTCAGGAGGACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCG
CCGAAGCCATCAAGGGATATGGGGCTCAGGTTAACTAGCCTAGGGATGAC
GTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAAC
CCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGT
TTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGATGAATCACTTTCC
CGAAGCTTGGGGTCGCCATCATACGGGTCTCTTGCCCGCTTCACTGATGT
GAAACGTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTG
ACGTTTCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATC
AGAGAAAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCA
TACTTATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCC
TCTGGAACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTC
CTCAGTTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGC
GACCGGCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCC
CAGAGGAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCG
CTAAGGGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGA
CAAGTACTCCTTAGCTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGG
ACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGA
TATGGGGCTCAGGTTAACTAGCCTAGGGATGACGTTTACGGACCCTACAA
CGCCTCATACCTCCAGACAACTGGTCCGAAAACCCACACTCAGTCACCTG
CTGTGACTGGTACGTCGGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCA
ATTGCTGCCGATAACCTAGATGAATCACTTTCCCGAAGCTTGGGGTCGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004175 | endopeptidase activity |
| GO:0004298 | threonine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011772-T1.utr5p1 | KJC3_011772-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263XZN |
| Note | MEROPS:MER0001711 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR016050 |
| DBxref | InterPro:IPR001353 |
| DBxref | InterPro:IPR016295 |
| DBxref | InterPro:IPR029055 |
| DBxref | PFAM:PF00227 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1562146..1563161 - |
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