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KJC3_011773-T1, KJC3_011773-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011773-T1
Unique NameKJC3_011773-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1563337..1564680-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011773-T1 ID=KJC3_011773-T1|Name=KJC3_011773-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1344bp|location=Sequence derived from alignment at ch8:1563337..1564680- (Aspergillus niger KJC3)
TCTAAAGAAATAAGAGCGGTCTTATTCGAGCCTAATGTCCTTTTCCAACG CCGCCTAATAGTTCATATTCCCACCGAGCGCTTTATCTGAAATTCAGAAC GCACCAGGAACTGAAGCCTAATTATAATGCTCGGCCTAGGGGCGTATGAA AGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCCTCAGTACCATCGAA GGTAAAAGGAGCATTATGCTGTGATATCGGCCTCTACTAACATGAAACCG GCAGAAGATCGCTAGCCAGCAAGCACAGCCGCAGGAAGTGACTAAAGCTA CAGGTGATTGGAGATTTAATCTACTTTTTTCTGAAACTAGTGGGACGTAT TTAACGTGTTACCAAAGCAGAAATCCCCAACGAAGCCACACCATCGAAAG AGATACCTGCTCCAGACACAGACAGGCCTGTTCTTGGACCGACGCATGAA GGCTCACAAGATCCACAACAGCAACCAGCCGAAAATTCACAAGTCTTCTT AGCAGACCGAGCATTGATCCATGACCTAACACTTCCTCCGTTACCAAATC TAGACATACCACCATCTCCCCCTGGCTCTCCTAACCCTGCAGCGAATGCC AAAATCGCACACTTCTTGACCTTGAAGAAACAGGGCATGCATTTCAACGA AAAGTTAGCCGGGTCTACATCCCTCAAGAACCCAAGTTTACTGAAGAAAA TGATGGATCATGCCGGAATTGATGATCAAGCGCAGTATCACACATCATTA CCACCTGAAGTATGGAGTATCAACGATCTGCCAAGTTGGGGGTATAAAGA GGAACTTTTGAAAGCGCAGAGGGAAATTCAGATTGGGGCTGAAGAAAGGA AGTCCGCAGGACAAAGGGATGCTATCAATTTTGTGGCTGCCACGCCTAGC GAGTCCTCCCGTACAGGCCCTATTTCTAGCTCAAGGGCAAAACAAAGGTA ATATGCGATGGATATTCCAGAGTGCAAGAATCTCTGCCAATGACAGCCGG GACAGTACGACCCGGCGTACAATGCTTGGGAAGCAAAGAAAGGTCCTCCG GCCCCAAAGCCTATGATGGGAGGCCTCCTCGTGAAAGGAAAGTTATCTGC CGGTGATAGTCTTTCTGTCACAGAATAACTATATAACGTCTATTTCTAGG GCCAAAAAAAGGAGAACGTAGCACTAGTGAATACCCATTGTTTTGCAGGG ACGACTGTTTCTTAGTAGCTGGAGGAGGGACTCAGCCTTCTTTAAGGGGG GCAATCTATAAAATATCTTTCCCCTCCCTCCTCCACTAAACAAGTGTCTC ATCAAATCAGTTCAAATATAAGTAACAGGCAATGGAAATATATA
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Coding sequence (CDS) from alignment at ch8:1563337..1564680-

>KJC3_011773-T1 ID=KJC3_011773-T1|Name=KJC3_011773-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch8:1563337..1564680- (Aspergillus niger KJC3)
AAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGCTCCAGACACA
GACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAGATCCACAACA
GCAACCAGCCGAAAATTCACAAGTCTTCTTAGCAGACCGAGCATTGATCC
ATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACCACCATCTCCC
CCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCACACTTCTTGAC
CTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCCGGGTCTACAT
CCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCATGCCGGAATT
GATGATCAAGCGCAGTATCACACATCATTACCACCTGAAGTATGGAGTAT
CAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTGAAAGCGCAGA
GGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGGACAAAGGGAT
GCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCCGTACAGGCCC
TATTTCTAGCTCAAGGGCAAAACAAAGGTAAAAGATCGCTAGCCAGCAAG
CACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCCTAGGGGCGTA
TGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCCTCAGTACCAT
CGAAGAAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGCTCCAG
ACACAGACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAGATCCA
CAACAGCAACCAGCCGAAAATTCACAAGTCTTCTTAGCAGACCGAGCATT
GATCCATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACCACCAT
CTCCCCCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCACACTTC
TTGACCTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCCGGGTC
TACATCCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCATGCCG
GAATTGATGATCAAGCGCAGTATCACACATCATTACCACCTGAAGTATGG
AGTATCAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTGAAAGC
GCAGAGGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGGACAAA
GGGATGCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCCGTACA
GGCCCTATTTCTAGCTCAAGGGCAAAACAAAGGTAAAAGATCGCTAGCCA
GCAAGCACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCCTAGGG
GCGTATGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCCTCAGT
ACCATCGAAGAAATCCCCAACGAAGCCACACCATCGAAAGAGATACCTGC
TCCAGACACAGACAGGCCTGTTCTTGGACCGACGCATGAAGGCTCACAAG
ATCCACAACAGCAACCAGCCGAAAATTCACAAGTCTTCTTAGCAGACCGA
GCATTGATCCATGACCTAACACTTCCTCCGTTACCAAATCTAGACATACC
ACCATCTCCCCCTGGCTCTCCTAACCCTGCAGCGAATGCCAAAATCGCAC
ACTTCTTGACCTTGAAGAAACAGGGCATGCATTTCAACGAAAAGTTAGCC
GGGTCTACATCCCTCAAGAACCCAAGTTTACTGAAGAAAATGATGGATCA
TGCCGGAATTGATGATCAAGCGCAGTATCACACATCATTACCACCTGAAG
TATGGAGTATCAACGATCTGCCAAGTTGGGGGTATAAAGAGGAACTTTTG
AAAGCGCAGAGGGAAATTCAGATTGGGGCTGAAGAAAGGAAGTCCGCAGG
ACAAAGGGATGCTATCAATTTTGTGGCTGCCACGCCTAGCGAGTCCTCCC
GTACAGGCCCTATTTCTAGCTCAAGGGCAAAACAAAGGTAAAAGATCGCT
AGCCAGCAAGCACAGCCGCAGGAAGTGACTAAAGCTACAGATGCTCGGCC
TAGGGGCGTATGAAAGCAGCAGTGATGAAGAAGTGGGAAATAATTTGCCC
TCAGTACCATCGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011773KJC3_011773Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011773-T1KJC3_011773-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011773-T1.cdsKJC3_011773-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011773-T1.utr3p1KJC3_011773-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011773-T1.exon3KJC3_011773-T1.exon3Aspergillus niger KJC3exon
KJC3_011773-T1.exon2KJC3_011773-T1.exon2Aspergillus niger KJC3exon
KJC3_011773-T1.exon1KJC3_011773-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011773-T1.utr5p1KJC3_011773-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012479
DBxrefPFAM:PF07818
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1563337..1564680 -