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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1564813..1565793+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011774-T1 ID=KJC3_011774-T1|Name=KJC3_011774-T1|organism=Aspergillus niger KJC3|type=mRNA|length=981bp|location=Sequence derived from alignment at ch8:1564813..1565793+ (Aspergillus niger KJC3)
CCTGCTACTATTCAATTCCACAACTTCCTACATAACAAACACCCTTCGTT
ACATCCTCAGTTACTAGCTGACCAGAGTATACTGAATTTTTTATCGTTTC
ATCCTAATCGATACTCTCTACAACAATCGAACTCTACGAAGAATGACGAC
TCTAGCCGGCAACCCTCTTAGCGAGGCCATCGGATACTCCTTCTCCAATG
CGAATAGTGCTCCCCATAGAGAGCACTCTTTCTATCCGTATGCGTCACTG
TCTTTCACTATATAATAGGGACTAAGCTAACTCACATCGGCAGCTATACG
GATAACGGCGGTTCTACCCTGGGCATTACTGGCTCCGATTTCGCGATCCT
GGCTGGAGATACTCGATCCGTTGCAGGATACAACATCAACTCCCGTTATG
TTCCCAAGGTGTTTAAAATTGGCGGTGATGATGAGTCTGGTGAAGGTGCC
AATATCGTCTTGTCAGTCGTGGGCTTCGCAGCAGATGGCCAGGCCCTTAA
AGAGCGACTAGATGCAGTGGTGAAGATGTACAAATACCAACACGGAAAGC
CCATGTCCGTGAGAGCCTGTGCCCAACGCTTGTCAACGATTCTTTACCAG
AAACGGTTCTTCCCCTACTATGTGCATGCTATCTTAGCAGGCTTGGACGA
GGATGGTAAGGGTGCCTTGTACAGCTACGATCCGGTTGGATCGTACGAGA
GAGAGCAATGCAGGGCTGCAGGGTCTGCAGCAAGTCTTATCATGCCGTTC
CTGGATAACCAGGTCAACTTCAAAAACCAATATATCCCGGGCAGCGGAGA
AGGGCATGCCCTTGAACCCAAGAAAGCGGAGCCACTGCCGAGAGATACTG
TTGAACAGCTGGTACGAGATGCATTCACCAGCGCCGTCGAAAGACATATT
GAGGTCGGAGATGGCTTGCAGATGATGGTTATTACCAGGAGTGGGGTGGA
GGAGATCTACTATCCGTTGAAGAAGGATTAG back to topCoding sequence (CDS) from alignment at ch8:1564813..1565793+ >KJC3_011774-T1 ID=KJC3_011774-T1|Name=KJC3_011774-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch8:1564813..1565793+ (Aspergillus niger KJC3)
ATGACGACTCTAGCCGGCAACCCTCTTAGCGAGGCCATCGGATACTCCTT
CTCCAATGCGAATAGTGCTCCCCATAGAGAGCACTCTTTCTATCCCTATA
CGGATAACGGCGGTTCTACCCTGGGCATTACTGGCTCCGATTTCGCGATC
CTGGCTGGAGATACTCGATCCGTTGCAGGATACAACATCAACTCCCGTTA
TGTTCCCAAGGTGTTTAAAATTGGCGGTGATGATGAGTCTGGTGAAGGTG
CCAATATCGTCTTGTCAGTCGTGGGCTTCGCAGCAGATGGCCAGGCCCTT
AAAGAGCGACTAGATGCAGTGGTGAAGATGTACAAATACCAACACGGAAA
GCCCATGTCCGTGAGAGCCTGTGCCCAACGCTTGTCAACGATTCTTTACC
AGAAACGGTTCTTCCCCTACTATGTGCATGCTATCTTAGCAGGCTTGGAC
GAGGATGGTAAGGGTGCCTTGTACAGCTACGATCCGGTTGGATCGTACGA
GAGAGAGCAATGCAGGGCTGCAGGGTCTGCAGCAAGTCTTATCATGCCGT
TCCTGGATAACCAGGTCAACTTCAAAAACCAATATATCCCGGGCAGCGGA
GAAGGGCATGCCCTTGAACCCAAGAAAGCGGAGCCACTGCCGAGAGATAC
TGTTGAACAGCTGGTACGAGATGCATTCACCAGCGCCGTCGAAAGACATA
TTGAGGTCGGAGATGGCTTGCAGATGATGGTTATTACCAGGAGTGGGGTG
GAGGAGATCTACTATCCGTTGAAGAAGGATTAGATGACGACTCTAGCCGG
CAACCCTCTTAGCGAGGCCATCGGATACTCCTTCTCCAATGCGAATAGTG
CTCCCCATAGAGAGCACTCTTTCTATCCCTATACGGATAACGGCGGTTCT
ACCCTGGGCATTACTGGCTCCGATTTCGCGATCCTGGCTGGAGATACTCG
ATCCGTTGCAGGATACAACATCAACTCCCGTTATGTTCCCAAGGTGTTTA
AAATTGGCGGTGATGATGAGTCTGGTGAAGGTGCCAATATCGTCTTGTCA
GTCGTGGGCTTCGCAGCAGATGGCCAGGCCCTTAAAGAGCGACTAGATGC
AGTGGTGAAGATGTACAAATACCAACACGGAAAGCCCATGTCCGTGAGAG
CCTGTGCCCAACGCTTGTCAACGATTCTTTACCAGAAACGGTTCTTCCCC
TACTATGTGCATGCTATCTTAGCAGGCTTGGACGAGGATGGTAAGGGTGC
CTTGTACAGCTACGATCCGGTTGGATCGTACGAGAGAGAGCAATGCAGGG
CTGCAGGGTCTGCAGCAAGTCTTATCATGCCGTTCCTGGATAACCAGGTC
AACTTCAAAAACCAATATATCCCGGGCAGCGGAGAAGGGCATGCCCTTGA
ACCCAAGAAAGCGGAGCCACTGCCGAGAGATACTGTTGAACAGCTGGTAC
GAGATGCATTCACCAGCGCCGTCGAAAGACATATTGAGGTCGGAGATGGC
TTGCAGATGATGGTTATTACCAGGAGTGGGGTGGAGGAGATCTACTATCC
GTTGAAGAAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004298 | threonine-type endopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011774-T1.utr5p1 | KJC3_011774-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926457R |
| Note | MEROPS:MER0005692 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR029055 |
| DBxref | InterPro:IPR001353 |
| DBxref | PFAM:PF00227 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1564813..1565793 + |
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