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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1578533..1580149- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011780-T1 ID=KJC3_011780-T1|Name=KJC3_011780-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1617bp|location=Sequence derived from alignment at ch8:1578533..1580149- (Aspergillus niger KJC3) ATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGGTAAGTCGATGGTTCCT
TGCTTTTTGACCGATCAATTCCTTTGTCCGACCCGACTTCGCTCGCTCGA
TTCCTTGCCCTTACTTCCCTCCCACCGCCGCCCGCTACATCCTTTCGCCC
GGCTGAATTAGAGAGAAACGCCTGGGCGCACTTGGAATACGATCTCCCAC
CTGCTTTGCTCAATTGCCTTTCGTTGACGATCTACGATTTTGATTATTTC
CTATTCCCTCTAACGCGGTTATGCTTGGCAGTCTTTGCTCCGTCGCGTTG
CGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATGTGCGTCAGCC
CTTCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGAC
TCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCAC
TAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGGTACCTACATTC
GTCTCTTTCACAGCTTGATCATTTTGCTGATGCTTCGGTGATTCGCTTTC
TTAAAGGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATC
TTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGG
TGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTG
CTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCG
GTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCT
GGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGA
CCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGT
GAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCT
GAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTG
GTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCC
AACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGT
CGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACG
CCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATG
CCCAACCTTTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGG
TGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGT
TCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAG
GCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCT
GGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGA
TCGGTGAGGGGTGAGTTTCAGACTTTTGTTTCAACCTTCCAGCTTGATTC
AGAGCTGTCGCTAATGCGAAATTCTCTAGTAAAACGAGGACCCGCGATAT
GGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGA
TGGAGGCTGCTCTGTAA back to topCoding sequence (CDS) from alignment at ch8:1578533..1580149- >KJC3_011780-T1 ID=KJC3_011780-T1|Name=KJC3_011780-T1|organism=Aspergillus niger KJC3|type=CDS|length=5790bp|location=Sequence derived from alignment at ch8:1578533..1580149- (Aspergillus niger KJC3) TAAAACGAGGACCCGCGATATGGGTGGACAGGCTACCACCCACGAGTTCA CCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCG GAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTT CCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAA ACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACA AGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCAC CAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTAT CGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTG ATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAA CACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGC CAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACA ACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCG GATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGAC TTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTT CCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTTTACGGTGGC ATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCC TGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTC ACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATG ATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGC CAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGCCTTTGCT AGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGCAAATACAC CGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGTTGCGGCGCCGACTTCC TTCCGTTCCTCCATCTCGGCAAGATATGTTCTCTTTGCGGACGGCGCAAC CCGCGCAGTAAAACGAGGACCCGCGATATGGGTGGACAGGCTACCACCCA CGAGTTCACCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGA CGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCG ACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACC GGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCG CCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCT CCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTC GCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGA GAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTG GTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATC ACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCT TGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGA AGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAAC TACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCA GGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTTT ACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGT GTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGG CTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTA GCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGAC GACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGG CCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGC AAATACACCGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGTTGCGGCGC CGACTTCCTTCCGTTCCTCCATCTCGGCAAGATATGTTCTCTTTGCGGAC GGCGCAACCCGCGCAGTAAAACGAGGACCCGCGATATGGGTGGACAGGCT ACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCT GTAAGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTT CAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTG TTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCT TCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGT TGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGG ATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGACC CGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGTGA ATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGA AGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGT TTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAA CATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCG CCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACGCC TCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCC CAACCTTTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTG GACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTC GAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGC TAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGG GATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGATC GGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGT ATGGCGGCAAATACACCGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGT TGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATATGTTCTCT TTGCGGACGGCGCAACCCGCGCAGTAAAACGAGGACCCGCGATATGGGTG GACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGATGGAG GCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAG ACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGT TAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGT CCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTC ACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCA GGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCT ACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACC GAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGA GTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTG CCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCAC AAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCA CAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCG ACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATG GTTATGCCCAACCTTTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCT TGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTG CTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAG GACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACG CCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATG ATGTGATCGGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCC CACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTCTTTGCTC CGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATA TGTTCTCTTTGCGGACGGCGCAACCCGCGCAGTAAAACGAGGACCCGCGA TATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATA AGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCTGAAT CGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAG GTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTT CAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTA TCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCT CTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACAT TCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTG AGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGG GTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGC CAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTT GCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGC ACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACAT GATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCG ACGTTATGGTTATGCCCAACCTTTACGGTGGCATTCTCTCCAACATTGGT TCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCG CGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCA AGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATG CTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGC CGTCTATGATGTGATCGGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATC TTCAAGCCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGT CTTTGCTCCGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCG GCAAGATATGTTCTCTTTGCGGACGGCGCAACCCGCGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0000287 | magnesium ion binding |
GO:0051287 | NAD binding |
GO:0004449 | isocitrate dehydrogenase (NAD+) activity |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Vocabulary: Biological Process
Term | Definition |
GO:0006099 | tricarboxylic acid cycle |
GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR019818 |
DBxref | InterPro:IPR004434 |
DBxref | InterPro:IPR024084 |
DBxref | PFAM:PF00180 |
Product | isocitrate dehydrogenase (NAD( )) idh1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:1578533..1580149 - |
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