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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1582391..1584309- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011782-T1 ID=KJC3_011782-T1|Name=KJC3_011782-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1919bp|location=Sequence derived from alignment at ch8:1582391..1584309- (Aspergillus niger KJC3)
TGTATCGTTCCTATACATACTATAATATAGTATACTCTACTTGACAAAAG
CTATTGCACAGCGCTTGCGCGCCACAATTGATTGGGGCTTCGACGTCAAC
GCATACAAGTTTTCCACCCGGTCAATACTTTCATATTCGAGGGGATACCG
GTATGTACATACCCGTATACTAATTCTATGCATGTGGGCTGGCATGTATT
ACCAGTCTTTATCCCCGCCGGCTGTCTCCTGTCGGCCTGAAATCGATCAT
CTTCTTGAGTGACGTAGATGGTTCTGTCAGGACATAACCAGCATCCGGTG
GGTGGTCAGCCGCGCAACCTTCTATCAGTAGGTAGGAATTTTCTACTCTC
TGTGAACCAAGAGACTGTGAGACTGCATGAGTAAGGTACTGATTCTACCG
TCTTTCGTTATAAATGCCCAACCATGTGTCTGTTTCGGGCATCGACCTGT
GTTTCAGTTGACATTTGACCAATGTTTCCCGCCACCTTGCTTGATGTTTC
CTATTTATTTTTCCAATCCACGGAGCACTGATATCCTTTACTTACTCTGC
TGCTTGATTCCCTTCGGCTAGAGGGCTGTATATCCCAAATTGGACCTGGA
GCTGTCTAGAGCTTCAATATTTGTTCCCTCCCACGGCTTTGCCACCCGCC
CTTTCACTTCGAGAACACCGAGCAGGAGAAGGTCAAGCGTGCATCATACA
TCCTCCAATTTGCACACTCCAAGAATATAGACGATATGTCTTCATCCATA
TTGCATAGCTGCCCCTGCTGTGGGCAAGTTACAGATATCTCCAATGCACT
TGCTGCTTTCATCGAAAACCCCTATTGTAGCCAGGTAGATACTTCATATA
TCTAACTTTATGATTCCATAAGCTCTCTGACCAGAGAATCATGCAGTGCG
GATTGTCCGCTTCTGAAAGCGATTTGAAATTACAAAATGATCTCTCAGCA
CTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTTATCACCCGAAGGGAG
CGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAATTGTGTATAGCATCA
CGCAACATTACCATCATTCTGCGCATGTTGCTCAACAGAATGCTACTCGT
TCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGCTGCCGTCAACGAGAC
ACTCCGACAGCACAACGTGGACCCCTCAACACTCTCAGCCAAGCAGACGG
AGCTTTTTGAACATGCCATCCCAGAACAACAATCACGCCTCATCCAGATG
TGGCAGATCTCCCCAGAGCACAGCTATGCAGCAACTGGCCACGCCAGCGA
AACCAGATTGCTGAACCAGGAAAGGTCGAATGTAGCCAGTGCTGTTGGCC
ATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGTGGTGATCGTGAAATG
TGCGATGTACCTGACCGGAATGAGAATGGAGATGATGGACACCTGTATGC
TGAGCCATATATGGTAACTGGATATGAGGCGATAGCCCAGGAAAGGAATG
GAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCTGAACCAACAACCGGA
TCACCATACAAGCTTTCGAGTGACCCTATTTACTATGCTCACTGTCGAAG
ATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGTATCAATACGGTCTAT
TCGACGAGATGAACCGTCATTCCCATTGCGGCTTAGTGCAACCTCGTTAG
ATCGAGTGTACAAAGATAGCTATGGCGTTCAATCCCACTATTTTGGTAGT
TATTGCCTAGATGATGTTACCATAATGACGAGCATGCGAGTTTCCGAAAT
GGCCAATACCAAGAAATGTTATGTTTGATAGCTTTATGTTTTCCTGGCTC
AGTAGAATTGTAGGAACCAATTAGATAGTCTAGCTGATGCCGTCAAAGAA
TATATGTGCTTGTAGCGAC back to topCoding sequence (CDS) from alignment at ch8:1582391..1584309- >KJC3_011782-T1 ID=KJC3_011782-T1|Name=KJC3_011782-T1|organism=Aspergillus niger KJC3|type=CDS|length=1806bp|location=Sequence derived from alignment at ch8:1582391..1584309- (Aspergillus niger KJC3)
TGCGGATTGTCCGCTTCTGAAAGCGATTTGAAATTACAAAATGATCTCTC
AGCACTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTTATCACCCGAAG
GGAGCGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAATTGTGTATAGC
ATCACGCAACATTACCATCATTCTGCGCATGTTGCTCAACAGAATGCTAC
TCGTTCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGCTGCCGTCAACG
AGACACTCCGACAGCACAACGTGGACCCCTCAACACTCTCAGCCAAGCAG
ACGGAGCTTTTTGAACATGCCATCCCAGAACAACAATCACGCCTCATCCA
GATGTGGCAGATCTCCCCAGAGCACAGCTATGCAGCAACTGGCCACGCCA
GCGAAACCAGATTGCTGAACCAGGAAAGGTCGAATGTAGCCAGTGCTGTT
GGCCATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGTGGTGATCGTGA
AATGTGCGATGTACCTGACCGGAATGAGAATGGAGATGATGGACACCTGT
ATGCTGAGCCATATATGGTAACTGGATATGAGGCGATAGCCCAGGAAAGG
AATGGAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCTGAACCAACAAC
CGGATCACCATACAAGCTTTCGAGTGACCCTATTTACTATGCTCACTGTC
GAAGATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGTATCAATACGGT
CTATTCGACGAGATGAACCGTCATTCCCATTGCGGCTTAGTGCAACCTCG
TTAGATGTCTTCATCCATATTGCATAGCTGCCCCTGCTGTGGGCAAGTTA
CAGATATCTCCAATGCACTTGCTGCTTTCATCGAAAACCCCTATTGTAGC
CAGTGCGGATTGTCCGCTTCTGAAAGCGATTTGAAATTACAAAATGATCT
CTCAGCACTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTTATCACCCG
AAGGGAGCGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAATTGTGTAT
AGCATCACGCAACATTACCATCATTCTGCGCATGTTGCTCAACAGAATGC
TACTCGTTCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGCTGCCGTCA
ACGAGACACTCCGACAGCACAACGTGGACCCCTCAACACTCTCAGCCAAG
CAGACGGAGCTTTTTGAACATGCCATCCCAGAACAACAATCACGCCTCAT
CCAGATGTGGCAGATCTCCCCAGAGCACAGCTATGCAGCAACTGGCCACG
CCAGCGAAACCAGATTGCTGAACCAGGAAAGGTCGAATGTAGCCAGTGCT
GTTGGCCATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGTGGTGATCG
TGAAATGTGCGATGTACCTGACCGGAATGAGAATGGAGATGATGGACACC
TGTATGCTGAGCCATATATGGTAACTGGATATGAGGCGATAGCCCAGGAA
AGGAATGGAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCTGAACCAAC
AACCGGATCACCATACAAGCTTTCGAGTGACCCTATTTACTATGCTCACT
GTCGAAGATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGTATCAATAC
GGTCTATTCGACGAGATGAACCGTCATTCCCATTGCGGCTTAGTGCAACC
TCGTTAGATGTCTTCATCCATATTGCATAGCTGCCCCTGCTGTGGGCAAG
TTACAGATATCTCCAATGCACTTGCTGCTTTCATCGAAAACCCCTATTGT
AGCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011782-T1.utr3p1 | KJC3_011782-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011782-T1.utr5p1 | KJC3_011782-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1582391..1584309 - |
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