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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1692662..1697790- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011792-T1 ID=KJC3_011792-T1|Name=KJC3_011792-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5129bp|location=Sequence derived from alignment at ch8:1692662..1697790- (Aspergillus niger KJC3)
CGCTCCAACTCATGCGTCTTTTAACTTCACGTCCAACCAACCAGAAGCTG
CTTGCCGGGGTTGTGGTAGCCAACCAGTTGCTTCGCGCCGCTCATGGCCG
ATCGCGCGCCAACTTCAATCCTGTCGAGTGCTCAGCAGCCAGCTGGCAGC
CGCATCCTTCTGCCAGGATGTACGACACCCAATGAATGACTCCAACTCTA
CGGTGCATCCATCCCACTAAGGTACTGCTAGTACATCGACTCCCCTGGTC
GTTTACCTCTTCATTTACTATTTTTCTTCCCGCCCCCCTCCTTACGGCTG
CTCGTCTTTCCTTTTTCTTTCCTGGGTTTGCAACTAGGTACTATTGGTTC
CTTAGTGAAATGCCTCGTTTCTTGATTCCCACCTGCAGGCGGCAAAAAAT
TTCGTTCTAGGAGTCCGTTTCGACATACTACTCGCTGACCTATAATTGTT
ATCGTTTGCCTATCCATCTTCTCTCCACTGCTAGTACGACCACGGCCACT
ACACTTTCCCCTCCTTCTTTCCTTTGACGCCTTTCCCCTCTTTTCTATTT
AGTAACCGCCCTATCTCGAATCCATGGCTTTGAATTGATGAGAGACGGCC
AGACATTCCCCATTCCAATCTACCCATCTTAATCTAGCATTTCAACTCGC
TTCACGTAACCTGCGCTTCATAGTTGCGATTCTCCCCTCTGTTATTGTTT
TTCTAGTTCAAAGCGAGGAACGCGCTTTCTATTTTCCTCTCTTCTTTGCC
CCCTCCTCTTCGCGAATCTTCCCTGCAATGTCCAAAACATTCTCGCTCCT
ACTTCTGCGCTGAATAATTGTTTCCTTGCCTCTACCGCCGGGGGTTCCCT
CAGCCCAACAACAACTCAAGATCAGCCCTTTAGTGGCACGATACTAAGGG
TAGTCATACAAGACACCTAGTCATTTACTAGGAAGCACCCTGATATCGAA
ATACTACGATAACCTTCTCTATCTCACCTTTCAGCTTAGTCGACTTGCAC
GATATATGTTTTCGCCCTAATCTCCTGCACCGCTTCTTGAGCTTGCATCC
CTTATGGACTGTGTTTCATGTGCTTGTTTGGAGACCACAAATGATTCAAT
TCAGCGCACATAACTCACAAGATAACATTGGGCAATCTGCAGATCCGGAC
AGGCACGTCTAGCGATTTCATCGTCCATTAGCCAGTAAGTGGCGGTAATC
GTCATCGGGTACAAGAAGCGTTATACTAGAAGCAAATGTCGGATAATTCA
ACTTTCATCCGCGCTGATCTATAAAAATCTATTACACCGAGCTGTTCATT
TACCATGGCAACAGTGGCTTCTACATCGGTAATGAATGATCAAGACACCG
AAAAAGTGCCCAGGGCAGACCATAGCCCTTCTCGATTTACTGCAGTGAAT
GGGAAAGAGCCCTCGGTGACTGCGGGAGCCGTGCCCACACCGGCTGTTAC
CGATTGCGCCGCTGAGTCTCCTGATGTCTTCGTACGAAATGGTTTGGATG
CGCAGTCTCGCCTCGACGAACAAATACAGGGCAACGTGAACCCCGAGAGC
GGCAACAGCGCTAATGAACAAGAGGAGCCCCATTCTCAGCGGTCACCTTC
CCTGAGTGGCTCGTCGGGTCCCAGCAAGAGCAAACGGAAAAGATCGGAAT
CTGGGGAACAAGAAGAAAGCCATGGTATGCTTCGCAGGGCTCCGAAGAGC
CCGGTTCTGCGTTCAGATGATACGAGCCAACCCCTCACTCAGACATCCAC
GTCTAATGACACCGGCATGTCCCATGGGGAAAACGATATCAAGCACCCAT
CCCCTTCTACTCAGGCTCGATTGGAGGAAAATGGGAGTGATAACCGAACG
CCACCGGCGAATACAGCATGGCATGATTATGATTCCCAGCTGGTACATCA
AGCCCAGCGTGCACAACAGTTTGACGCATCCGATGCTCAATTGGCTGAGG
CACTTCAGCGCGAGGCCAATGGCCATGATTCGTCTCAAAAGAATTGGGGT
ACAAACGGTCGTCCAACGGAAGGGCCAGCACAGAGTGAGCAACCATCCTC
ACTATCTGTACTTCCTCAGGAGCGGCCACAGGCAGCCGTCCAAGTTGCAC
CCAAGAGAAAACGCGTGTTTAGTAACCGAACCAAAACAGGTTGCATGACT
TGCCGGAGGAGGAAAAAGAAGTGCGATGAACAACATCCTGCCTGTAAGTT
TGGTGATATGGCTTCCGTAGCTATGTTGTGGTATGGTTACGATCTAACTT
CATCGATGTTGTAGGCAACAACTGTATCAGAGGGGGATTTCTGTGTGAGG
GCTATTCATCTCGAAGCACCTGGCAAAAGCCGTCAAATTCGAAGACGCCA
GTTCCACTACAATCAAAGGAAGGCTATCTGGATATCAATTCTCAGTATGT
CCACGATATAAGTCAGCATGACCGGCAACAAACCATGCCGGAACAACTTG
ATCCAGGGAAAATCAGGCCTATTGTTGTAGACGAAAGTGACCGGGCAACT
GCCTCGTTCAATACAAGTCCCACAGGAGCTAGTTCCGGTCGTGGTCCATG
GACGAAACGCAGCTGGGGAAGCACAAACCACCCTTCCTATATCTCCGATC
ATGTGGCAAAGCCTGATTACCGCGAGGTCCCCTCGATTCATGAATTATCC
CGCGAAGGTCATGCTAAGTCCGACTTCCCAATTGTTCCTCCTATCAGAGA
GCTTTCTCATGGAGGTCATACCAAACCCGGGACAGTCCCGCTCTTCCAAG
GAGGGATGGACCAACGGTCAACACATTCCGGAAACGTGGACACTAATAGT
CCCCAGGCTCAGGCGCGGATGGCGCTTAGCATCGAGCACCAGTTATCGAC
TCGTACGTTATCGACCGAGGATACAGAAAAAGATAAGATGATACGTGGTG
ACCTCTACCGGCCTTATGATGTTCACCTCGTGGAAGAGAGGGATCGCTGC
AAGGCCGCCCTATGGCGGTTTAATAATGCCTGTAATCCTATTTCGGGGTT
AAGCACTAAGGAGCAAAGTCGGCTACTGAAAGAAGTGCTTGTTCCTCCAG
GCTCAGTTATCAACTCACCCCCTGGTTTGGCTTCATCTCGTTCGACAGGG
TCGTTAGGGCAAGGTGCTATTGTTGAGGCACCTTTCTACTGTCATTATGG
ATACAACGTGCATATCGGTGAAGATGTCATGGTCTCAGAAAACTGCTTGT
TTGTTGATGACTGTCCTGTAACCATTGGTGCCCATACCTGGATAGGTCCC
CGGGTTACCATACTTACATCAATGGCCCATGCTAATATGCAAGAACGCAA
AGGCTCACAAAGCCGATATCAAGGGCGCCCTGTTACAATTGAGGAAGATT
GCTACGTTGGGGCTGGCTGTACAATCTATCCTGGTGTTCGACTACGACGC
GGGGCGTATGTCGCTCCTGGAGAGGTAGTAAAGTCAGACATTGTAGCCTA
TGGTTTTCAGGGACTAAAGCCAAGTTATATGTGATTCACGTGCATGTCTG
TTGGTACGTACCAGCTGATTATTATTATTTTTTTTTTTTTTGGCTTTCAA
GATACCAACCATTCTCTACTTGTCTATCTCATCAACCGTCAGCTTTGCTT
GTAATTATACCGATTTATTTTCAGCACCCATTTCGAGGGATCTGGCTGGC
TCAGAGCACAAGGTGTGAAGCTTATATTTGACATGACTTTTAGTTTTTCC
ATCAAGCCCTATTAGTATTCTTTGATAACAGAAGTGGTCCGCAGGCATAA
GGGGTGAAGTGATGCCTGTCCCTTTTCTACTATCAGAGCAGCTAGATACC
TAAATATCTTTACAGGAGCATTGCATTTAGGCGACAGACTGTAGGATTTG
GGCGGACATGAATCACCAAGTTGTTTAAATTGTGTATCGGAATTTGGATT
CCAATCGTCCAGCAGGAGATGAGGTTATATATTTGGATTAACAGGGACAA
GCGGGAAAAGAAAAAGGAAACCAGTCTGGCTATGTATAGTATGAAGGCGA
AAGAAGCAGCAATAAAATTCTTTTTGATCGATCGACAGGCTCGATCGAAT
GGATGAGCCTTTACAGAAAAACAGACAAAAGGATAACGGGGAATAAACAG
CAAAGAGGACAGACACTCGTTACAATCATGATTAGTGTTGGCCTTTCACA
GCAGCTTAAGAAAGCCAATCCAGAAAGTCGGGCACAAAGTAGCTCACAAT
AATACCAGCTCCTGCCCGTAGTATACCCTCTGTGCTCTCGAAAGCCATTG
ATTTCAAATCGAAAACGCCAGCCTTAGCCCCTGCATGTATCATGGCATAC
TCTCCGCTAACTTGGTAAGCGGCAACTGGCATGTCTTTGGCGAGCTCCTT
GGCGTCCCGTATGATATCCAAATAGCTACTAGCGGGCTTCACCATTATGA
TGTCTGCGCCCTCACCAATATCGCGCTGTATCGCTCGCCGAGCAAGCCCC
CGGCCACCTGGGGGTAATTGGTAACACCTGCGGTCTCCGAAGGATGGGCA
AGAGCCTGCGGCATCTCGGAAGGGACCATATAGACATCCACTGAATTTTG
CACTGTAGGACATTAGGAGGACACGATGAGCTATACCAGCTTCAATAAGC
TTCAGCTTTATGGCGCGGACTCTGCCGTCATTCATATCTGACGGAGCCAC
GCAGTGAGCACCGGCAGCAGCATAGGCGAGGGCTACATCTGAGATTCTAT
CAACGGACTGTGCGTTATCGAGCGTCCCATCCTCACGTAGTATCCCGCAA
TGACCATGTGAGGTATATTCACAAAGACAAACATCCGTCACGATATAAAG
TTGAGGAAAGCGCGAACGAAGAAGGCGGATGGCCTGAACTACTGGACCGG
TCGGGTCATCTGCAGCGGTTCCCAGCGCATCCTTTGCAGATGGATGCAAA
GGGACACCGAACAGAATCACGGAACGCAGGCCTTTCTGTACTAATGGTCT
TAAGAAGGGGACCAACCGATTCAGCCCTCGGCGATACTGATTTGGAAGGG
ATGGAATAGGCGTCTCCTCATCAGGGTTATCGGTAATGAAAAGGGGATAT
ATGAGCATCTCCTGCGCACAATTAGACCATGCTAGTACAGGACTATGTCG
TAGTACGAACCTTGGTCAACTGCTTCTCG back to topCoding sequence (CDS) from alignment at ch8:1692662..1697790- >KJC3_011792-T1 ID=KJC3_011792-T1|Name=KJC3_011792-T1|organism=Aspergillus niger KJC3|type=CDS|length=4218bp|location=Sequence derived from alignment at ch8:1692662..1697790- (Aspergillus niger KJC3)
GCAACAACTGTATCAGAGGGGGATTTCTGTGTGAGGGCTATTCATCTCGA
AGCACCTGGCAAAAGCCGTCAAATTCGAAGACGCCAGTTCCACTACAATC
AAAGGAAGGCTATCTGGATATCAATTCTCAGTATGTCCACGATATAAGTC
AGCATGACCGGCAACAAACCATGCCGGAACAACTTGATCCAGGGAAAATC
AGGCCTATTGTTGTAGACGAAAGTGACCGGGCAACTGCCTCGTTCAATAC
AAGTCCCACAGGAGCTAGTTCCGGTCGTGGTCCATGGACGAAACGCAGCT
GGGGAAGCACAAACCACCCTTCCTATATCTCCGATCATGTGGCAAAGCCT
GATTACCGCGAGGTCCCCTCGATTCATGAATTATCCCGCGAAGGTCATGC
TAAGTCCGACTTCCCAATTGTTCCTCCTATCAGAGAGCTTTCTCATGGAG
GTCATACCAAACCCGGGACAGTCCCGCTCTTCCAAGGAGGGATGGACCAA
CGGTCAACACATTCCGGAAACGTGGACACTAATAGTCCCCAGGCTCAGGC
GCGGATGGCGCTTAGCATCGAGCACCAGTTATCGACTCGTACGTTATCGA
CCGAGGATACAGAAAAAGATAAGATGATACGTGGTGACCTCTACCGGCCT
TATGATGTTCACCTCGTGGAAGAGAGGGATCGCTGCAAGGCCGCCCTATG
GCGGTTTAATAATGCCTGTAATCCTATTTCGGGGTTAAGCACTAAGGAGC
AAAGTCGGCTACTGAAAGAAGTGCTTGTTCCTCCAGGCTCAGTTATCAAC
TCACCCCCTGGTTTGGCTTCATCTCGTTCGACAGGGTCGTTAGGGCAAGG
TGCTATTGTTGAGGCACCTTTCTACTGTCATTATGGATACAACGTGCATA
TCGGTGAAGATGTCATGGTCTCAGAAAACTGCTTGTTTGTTGATGACTGT
CCTGTAACCATTGGTGCCCATACCTGGATAGGTCCCCGGGTTACCATACT
TACATCAATGGCCCATGCTAATATGCAAGAACGCAAAGGCTCACAAAGCC
GATATCAAGGGCGCCCTGTTACAATTGAGGAAGATTGCTACGTTGGGGCT
GGCTGTACAATCTATCCTGGTGTTCGACTACGACGCGGGGCGTATGTCGC
TCCTGGAGAGGTAGTAAAGTCAGACATTGTAGCCTATGGTTTTCAGGGAC
TAAAGCCAAGTTATATGTGAATGGCAACAGTGGCTTCTACATCGGTAATG
AATGATCAAGACACCGAAAAAGTGCCCAGGGCAGACCATAGCCCTTCTCG
ATTTACTGCAGTGAATGGGAAAGAGCCCTCGGTGACTGCGGGAGCCGTGC
CCACACCGGCTGTTACCGATTGCGCCGCTGAGTCTCCTGATGTCTTCGTA
CGAAATGGTTTGGATGCGCAGTCTCGCCTCGACGAACAAATACAGGGCAA
CGTGAACCCCGAGAGCGGCAACAGCGCTAATGAACAAGAGGAGCCCCATT
CTCAGCGGTCACCTTCCCTGAGTGGCTCGTCGGGTCCCAGCAAGAGCAAA
CGGAAAAGATCGGAATCTGGGGAACAAGAAGAAAGCCATGGTATGCTTCG
CAGGGCTCCGAAGAGCCCGGTTCTGCGTTCAGATGATACGAGCCAACCCC
TCACTCAGACATCCACGTCTAATGACACCGGCATGTCCCATGGGGAAAAC
GATATCAAGCACCCATCCCCTTCTACTCAGGCTCGATTGGAGGAAAATGG
GAGTGATAACCGAACGCCACCGGCGAATACAGCATGGCATGATTATGATT
CCCAGCTGGTACATCAAGCCCAGCGTGCACAACAGTTTGACGCATCCGAT
GCTCAATTGGCTGAGGCACTTCAGCGCGAGGCCAATGGCCATGATTCGTC
TCAAAAGAATTGGGGTACAAACGGTCGTCCAACGGAAGGGCCAGCACAGA
GTGAGCAACCATCCTCACTATCTGTACTTCCTCAGGAGCGGCCACAGGCA
GCCGTCCAAGTTGCACCCAAGAGAAAACGCGTGTTTAGTAACCGAACCAA
AACAGGTTGCATGACTTGCCGGAGGAGGAAAAAGAAGTGCGATGAACAAC
ATCCTGCCTGCAACAACTGTATCAGAGGGGGATTTCTGTGTGAGGGCTAT
TCATCTCGAAGCACCTGGCAAAAGCCGTCAAATTCGAAGACGCCAGTTCC
ACTACAATCAAAGGAAGGCTATCTGGATATCAATTCTCAGTATGTCCACG
ATATAAGTCAGCATGACCGGCAACAAACCATGCCGGAACAACTTGATCCA
GGGAAAATCAGGCCTATTGTTGTAGACGAAAGTGACCGGGCAACTGCCTC
GTTCAATACAAGTCCCACAGGAGCTAGTTCCGGTCGTGGTCCATGGACGA
AACGCAGCTGGGGAAGCACAAACCACCCTTCCTATATCTCCGATCATGTG
GCAAAGCCTGATTACCGCGAGGTCCCCTCGATTCATGAATTATCCCGCGA
AGGTCATGCTAAGTCCGACTTCCCAATTGTTCCTCCTATCAGAGAGCTTT
CTCATGGAGGTCATACCAAACCCGGGACAGTCCCGCTCTTCCAAGGAGGG
ATGGACCAACGGTCAACACATTCCGGAAACGTGGACACTAATAGTCCCCA
GGCTCAGGCGCGGATGGCGCTTAGCATCGAGCACCAGTTATCGACTCGTA
CGTTATCGACCGAGGATACAGAAAAAGATAAGATGATACGTGGTGACCTC
TACCGGCCTTATGATGTTCACCTCGTGGAAGAGAGGGATCGCTGCAAGGC
CGCCCTATGGCGGTTTAATAATGCCTGTAATCCTATTTCGGGGTTAAGCA
CTAAGGAGCAAAGTCGGCTACTGAAAGAAGTGCTTGTTCCTCCAGGCTCA
GTTATCAACTCACCCCCTGGTTTGGCTTCATCTCGTTCGACAGGGTCGTT
AGGGCAAGGTGCTATTGTTGAGGCACCTTTCTACTGTCATTATGGATACA
ACGTGCATATCGGTGAAGATGTCATGGTCTCAGAAAACTGCTTGTTTGTT
GATGACTGTCCTGTAACCATTGGTGCCCATACCTGGATAGGTCCCCGGGT
TACCATACTTACATCAATGGCCCATGCTAATATGCAAGAACGCAAAGGCT
CACAAAGCCGATATCAAGGGCGCCCTGTTACAATTGAGGAAGATTGCTAC
GTTGGGGCTGGCTGTACAATCTATCCTGGTGTTCGACTACGACGCGGGGC
GTATGTCGCTCCTGGAGAGGTAGTAAAGTCAGACATTGTAGCCTATGGTT
TTCAGGGACTAAAGCCAAGTTATATGTGAATGGCAACAGTGGCTTCTACA
TCGGTAATGAATGATCAAGACACCGAAAAAGTGCCCAGGGCAGACCATAG
CCCTTCTCGATTTACTGCAGTGAATGGGAAAGAGCCCTCGGTGACTGCGG
GAGCCGTGCCCACACCGGCTGTTACCGATTGCGCCGCTGAGTCTCCTGAT
GTCTTCGTACGAAATGGTTTGGATGCGCAGTCTCGCCTCGACGAACAAAT
ACAGGGCAACGTGAACCCCGAGAGCGGCAACAGCGCTAATGAACAAGAGG
AGCCCCATTCTCAGCGGTCACCTTCCCTGAGTGGCTCGTCGGGTCCCAGC
AAGAGCAAACGGAAAAGATCGGAATCTGGGGAACAAGAAGAAAGCCATGG
TATGCTTCGCAGGGCTCCGAAGAGCCCGGTTCTGCGTTCAGATGATACGA
GCCAACCCCTCACTCAGACATCCACGTCTAATGACACCGGCATGTCCCAT
GGGGAAAACGATATCAAGCACCCATCCCCTTCTACTCAGGCTCGATTGGA
GGAAAATGGGAGTGATAACCGAACGCCACCGGCGAATACAGCATGGCATG
ATTATGATTCCCAGCTGGTACATCAAGCCCAGCGTGCACAACAGTTTGAC
GCATCCGATGCTCAATTGGCTGAGGCACTTCAGCGCGAGGCCAATGGCCA
TGATTCGTCTCAAAAGAATTGGGGTACAAACGGTCGTCCAACGGAAGGGC
CAGCACAGAGTGAGCAACCATCCTCACTATCTGTACTTCCTCAGGAGCGG
CCACAGGCAGCCGTCCAAGTTGCACCCAAGAGAAAACGCGTGTTTAGTAA
CCGAACCAAAACAGGTTGCATGACTTGCCGGAGGAGGAAAAAGAAGTGCG
ATGAACAACATCCTGCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016407 | acetyltransferase activity |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011792-T1.utr3p1 | KJC3_011792-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011792-T1.utr5p1 | KJC3_011792-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011004 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001451 |
| DBxref | InterPro:IPR024688 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF16628 |
| DBxref | PFAM:PF12464 |
| DBxref | PFAM:PF14602 |
| DBxref | PFAM:PF00132 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1692662..1697790 - |
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