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KJC3_011807-T1, KJC3_011807-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011807-T1
Unique NameKJC3_011807-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1740080..1741704+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011807-T1 ID=KJC3_011807-T1|Name=KJC3_011807-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch8:1740080..1741704+ (Aspergillus niger KJC3)
GTGGTGGGTGCCATCGGAAACATGATCTCATTCGGCCGCCAGCCAGTTTG
TCCCGCCATGATCATCAACTCGCGTCCAAAACAACATTCGTATCCTTCTC
AACAACCATACAGCGTGCTCAAACTCATCCGGGCCTACTCTGTCTAGGCT
TATAGAGCTCTGGTTTAAGCATGGTAATGTCTTAACATAAGGAATTATGA
TGCTGTTGAGGTAGTTTCTAACTTGGGACACAATTGAGTTTTAGTCTAAA
CAATATCTCTCTTGCGGTTCTGCAGACAATGGTTCGTATATCTTGAATGA
CTCCCTACAATCTCTGGCATCTACTAATATCAAGAACAGCCCACCCCGTT
GATATCTTCGCACTGGCCGTGACTGACAAGCAGATCTTGTCGGCCTCGGG
TACTTCTTCCCTTAAAGTCCACTCGACTACAGACCCCGATTTTCCGCTAG
TACAGTCTATTGACGGTGCCCATAAAGTTGGGTGCCATCATGTGGTCACT
AACGGAAATGGCTTGAGGGCCGTCAGTATCGGATTTGGCGGTGAGATCAT
GATTTGGTCTTGTCACGACGGAGTCTGGGCAAAGGATGAGGGGGCCTCTG
GTAAGTAGTACTCCGCTGTGTCAATCCTGCGTCTGACCATGATCCAGTCA
ACAAGGCGACGCCTGCAGATGTCTGGGCCATCGCTTTATCCGAAGATGGA
CAATATCTTGCCGGTGTTACGCAAGATGGTCATATTAAGGTGTGGGATCT
GGACACCAATGGCGAGGAAATCCGAGACTATGAAACCAAAGGTAGCTTCG
GCACCTGCATAGATTTGGTAGGTGAAGACTAGTCTACTTCCGACACTGTT
GGGGGCTCAAACTCATGGATCATCTTTCTAGTCCGCGGATGGCCGCTTCA
TAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAGTACAGAAAGC
GGACGCATGCCATTCAGCCTATCAGGTGCGTAATCTGTTGTGCTAGCTTC
AAACGAAGCAGACACGAGTCCGGATGATTGTCTAACCTGTGTATACAGGC
CTGGTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCT
TGCTGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTG
GTGAACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTT
TCGTGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTAAGTGCTATGCAT
ATCCCCTGTGAATGCTATCTAACGCTCAAAAGGTCGTTTGATGGAAAGGT
CAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAA
CAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCA
GTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGA
AGCCACTGGTGGTTAGTGCATAGGCCGTGTGCGAATTAGCCAATACCTTT
GTTGCTTGAGTCCCTTACCAGCGAGCTACTTGAGGCCTCTTCCTGTGTAT
GCTGAGACGAAAGAAACCTCTATAAGCGCCTTTATGCATTGTCTAACTGG
AAGCCTTAAATTGTAGCACCTAACA
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Coding sequence (CDS) from alignment at ch8:1740080..1741704+

>KJC3_011807-T1 ID=KJC3_011807-T1|Name=KJC3_011807-T1|organism=Aspergillus niger KJC3|type=CDS|length=6552bp|location=Sequence derived from alignment at ch8:1740080..1741704+ (Aspergillus niger KJC3)
ATGTCTAAACAATATCTCTCTTGCGGTTCTGCAGACAATGCCCACCCCGT
TGATATCTTCGCACTGGCCGTGACTGACAAGCAGATCTTGTCGGCCTCGG
GTACTTCTTCCCTTAAAGTCCACTCGACTACAGACCCCGATTTTCCGCTA
GTACAGTCTATTGACGGTGCCCATAAAGTTGGGTGCCATCATGTGGTCAC
TAACGGAAATGGCTTGAGGGCCGTCAGTATCGGATTTGGCGGTGAGATCA
TGATTTGGTCTTGTCACGACGGAGTCTGGGCAAAGGATGAGGGGGCCTCT
GTCAACAAGGCGACGCCTGCAGATGTCTGGGCCATCGCTTTATCCGAAGA
TGGACAATATCTTGCCGGTGTTACGCAAGATGGTCATATTAAGGTGTGGG
ATCTGGACACCAATGGCGAGGAAATCCGAGACTATGAAACCAAAGGTAGC
TTCGGCACCTGCATAGATTTGTCCGCGGATGGCCGCTTCATAGCGAGCGG
GCATGAAAATGGTAGTGTTTACATTTTCAGTACAGAAAGCGGACGCATGC
CATTCAGCCTATCAGGCCTGGTTAAACCTGTACGAGCTGTTGCATTCTCC
CCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGATTCCAAGGTAATTGTGCT
TTATGACACGTCCTCTGGTGAACAAGTGGCAAGTCTCTCGGGGCACACCG
CATGGGTCATGTCGCTTTCGTGGAGCCCCACGGGGGAGTATCTCCTCAGC
GGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCAATAGACACGAGAGCATG
TGTGGCCACCCATTCCGAAACAGAGAAAGCAATATGGAGTGTCAAGTGGC
TAGCGAAGATCGGGAGATCAGTAGGATTTGCCACGGCGGGTGCAAACCGG
AGCATATCATTCTACCGTGAAGCCACTGGTGGTTAGATGTCTAAACAATA
TCTCTCTTGCGGTTCTGCAGACAATGCCCACCCCGTTGATATCTTCGCAC
TGGCCGTGACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTT
AAAGTCCACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGA
CGGTGCCCATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCT
TGAGGGCCGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGT
CACGACGGAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGAC
GCCTGCAGATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTG
CCGGTGTTACGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAAT
GGCGAGGAAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCAT
AGATTTGTCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTA
GTGTTTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCA
GGCCTGGTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTT
CCTTGCTGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCT
CTGGTGAACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCG
CTTTCGTGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGG
AAAGGTCAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATT
CCGAAACAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGG
AGATCAGTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTA
CCGTGAAGCCACTGGTGGTTAGATGTCTAAACAATATCTCTCTTGCGGTT
CTGCAGACAATGCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGAC
AAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGAC
TACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAG
TTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGT
ATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTG
GGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCT
GGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCAA
GATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCG
AGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCGG
ATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTC
AGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACC
TGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTG
GAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTG
GCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCC
CACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTT
GGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAA
GCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATT
TGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTG
GTGGTTAGATGTCTAAACAATATCTCTCTTGCGGTTCTGCAGACAATGCC
CACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAAGCAGATCTTGTC
GGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTACAGACCCCGATT
TTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTTGGGTGCCATCAT
GTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTATCGGATTTGGCGG
TGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGGCAAAGGATGAGG
GGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGGGCCATCGCTTTA
TCCGAAGATGGACAATATCTTGCCGGTGTTACGCAAGATGGTCATATTAA
GGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGACTATGAAACCA
AAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCGGATGGCCGCTTCATA
GCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAGTACAGAAAGCGG
ACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTGTACGAGCTGTTG
CATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGATTCCAAGGTA
ATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAGTCTCTCGGG
GCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGGGGGAGTATC
TCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCAATAGACACG
AGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGCAATATGGAGTGT
CAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCACGGCGGGTG
CAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGTGGTTAGATGTCT
AAACAATATCTCTCTTGCGGTTCTGCAGACAATGCCCACCCCGTTGATAT
CTTCGCACTGGCCGTGACTGACAAGCAGATCTTGTCGGCCTCGGGTACTT
CTTCCCTTAAAGTCCACTCGACTACAGACCCCGATTTTCCGCTAGTACAG
TCTATTGACGGTGCCCATAAAGTTGGGTGCCATCATGTGGTCACTAACGG
AAATGGCTTGAGGGCCGTCAGTATCGGATTTGGCGGTGAGATCATGATTT
GGTCTTGTCACGACGGAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAAC
AAGGCGACGCCTGCAGATGTCTGGGCCATCGCTTTATCCGAAGATGGACA
ATATCTTGCCGGTGTTACGCAAGATGGTCATATTAAGGTGTGGGATCTGG
ACACCAATGGCGAGGAAATCCGAGACTATGAAACCAAAGGTAGCTTCGGC
ACCTGCATAGATTTGTCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGA
AAATGGTAGTGTTTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCA
GCCTATCAGGCCTGGTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGG
GGAAAGTTCCTTGCTGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGA
CACGTCCTCTGGTGAACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGG
TCATGTCGCTTTCGTGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCG
TTTGATGGAAAGGTCAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGC
CACCCATTCCGAAACAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGA
AGATCGGGAGATCAGTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATA
TCATTCTACCGTGAAGCCACTGGTGGTTAGATGTCTAAACAATATCTCTC
TTGCGGTTCTGCAGACAATGCCCACCCCGTTGATATCTTCGCACTGGCCG
TGACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTC
CACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGC
CCATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGG
CCGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGAC
GGAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGC
AGATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTG
TTACGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAG
GAAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTT
GTCCGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTT
ACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTG
GTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGC
TGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTG
AACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCG
TGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGT
CAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAA
CAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCA
GTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGA
AGCCACTGGTGGTTAGATGTCTAAACAATATCTCTCTTGCGGTTCTGCAG
ACAATGCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAAGCAG
ATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTACAGA
CCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTTGGGT
GCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTATCGGA
TTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGGCAAA
GGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGGGCCA
TCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCAAGATGGT
CATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGACTA
TGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCCGCGGATGGCC
GCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAGTACA
GAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTGTACG
AGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGATT
CCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAGT
CTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGGG
GGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCAA
TAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGCAATA
TGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCAC
GGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGTGGTT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011807KJC3_011807Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011807-T1KJC3_011807-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011807-T1.utr5p1KJC3_011807-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011807-T1.exon1KJC3_011807-T1.exon1Aspergillus niger KJC3exon
KJC3_011807-T1.exon2KJC3_011807-T1.exon2Aspergillus niger KJC3exon
KJC3_011807-T1.exon3KJC3_011807-T1.exon3Aspergillus niger KJC3exon
KJC3_011807-T1.exon4KJC3_011807-T1.exon4Aspergillus niger KJC3exon
KJC3_011807-T1.exon5KJC3_011807-T1.exon5Aspergillus niger KJC3exon
KJC3_011807-T1.exon6KJC3_011807-T1.exon6Aspergillus niger KJC3exon
KJC3_011807-T1.exon7KJC3_011807-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011807-T1.cdsKJC3_011807-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011807-T1.utr3p1KJC3_011807-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1740080..1741704 +
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