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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1768146..1771347- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011819-T1 ID=KJC3_011819-T1|Name=KJC3_011819-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3202bp|location=Sequence derived from alignment at ch8:1768146..1771347- (Aspergillus niger KJC3)
CTAAACTCGGTCTGCGCCCCCCGGCTTCATCGCCCCTTTCCTGGTTTTTG
TGCCTCTACTTTCTGTCCATCCCGAGTCGCTGCGGCTGTTAAGCTTTTGC
GCCTCTGTCAGTGGCTCTGCCCGGGAAAAAATAAATAAAAAGAAAAAGGA
AACTGTCCAGCGATCGGTTGGCGTGTCTGACACTATTTATCCTTTGCACG
TGCCACAGCCAGTTCAGGCCCAGTCCCATCCCATCATCATCCATCATCAT
ATTCCGTCCCGCTTAAGTGATAAGATCAAATTCTTACATCGTCTCGAAAG
AAGAGGAGAACTTTTTTTCTTCTCCTTCATAGACCAAGCTAGCATCGCCA
GCGAGCTGAAAACCCAGTCTAGAATCCGGGAAATCGGGCTTCATGTATCC
TTAAATCGGGATTTCGTCACTCTCGCGCTTCCACCCCAAGATTATTTCTT
GGAGGCTGTCTAACCTATTAAGTTGACACCGCGTCCGTCCGTACCTACTC
GCTCCCTCTTTCAGCACATTTGACCCTCCCCGTGCCTCATCTGCTTCTCT
CGCGCGCGATCCCTGTCCAGTAGCCCTGGGCCATATTGTCCGATGTGGCT
CTTCCGCGCCCTTTCGTCGGCCGTCTTTCTGGCCGTCACCGTCTCTTCCA
TTCCCCTCGCCTTTGATGTGGGTGGGAAAACATGCGGTCTGGCCTATTCC
TTGTCCCTGGCCACCTTCTACTTCCTATTTTCGCTTCTGCGCCTCACTAC
GCCTGATCGGTCATGGCTCCGCTCCTCCCTGATCGTCGTCATTAGCTCGA
CGCAATGGCTCATTATTCCGATTCTGCTTATCTGGTCGCTGAACCGCTTC
TCGATCGATACCGATAATGCTGGCTCTTGGGTGGAGCGGACCTTCACGGG
CAAGAGAGCCCACGACTCATCGATCCAGGAGTGGCTGTTTGGGCCCGATG
GGCTGGTAGAATCAGTGACTATCGGGAACTGGGATAAACTGCTGAGATGG
TCGACCCCAGTTTTCCAGCTGGTTGAAGGATTCTGCAGCTTATTGGTCAT
ACAGGCTGCAGGGCAGATTACCCGCTGGCTTGTCAACCGTGGTGGGCGAA
GCGATAGTTGGATGGTATGTCCACGTCACTCCACAGTCCACATTTTGTGG
GGTGCTTATTTGCTAATTCGTGCTTCGCTAGATCGGTCTCCTGGTACTCT
CCGCCTCCATCATATCGAGCTCGGTATACTTCCTGTGGCGAGTCCTCCAA
TTTCCCGAGATCTCAAATGTTGATGCCGCTTTAATCGGGGTATCCATCAC
CTGTGCTGTGATCCTTTGCGCGTGGGGTATTGGTAGTGGGCGAGGAAACC
CAGTAGAAAGCTCTCTACTGTTCGCATACATCGTTCTTTGCATCTACCAG
ATCTTCACTGATTACCAGCCGTCACATCCTGTGGAGCAAGTCCCTTCTCC
CGCTCAAGCCGGGGATTTCCCACCGCTTCCTCCTATTATCATGGCTTCCT
ACACGACCCTGATGCACGCCTTGTCCACCTTGCCCTCCATCATCCACGCC
GCCTTCAACGTCATCACCGCGGTATTCGGTGCCGTCACCCCCTCCGTATT
GATCTCGCTCACATACCGGATCCTTGTTCTGTACGCATCGACTCGCATCA
TACCCGCTGTCCGCGAAGCGGGTGCACGAGCTCTCTCCCAAGAAGCATCG
TTGGATGACTCCGATGCGGCGGGCCAGTTCTTGGGCGTACTCAGCTACTT
CTCTCCGTCGATCCTGATCGCTGTATACACCAGTCTCTTGATGCAGCACT
TCGCCTCTACCTCTCAAGCAATGGGTGGCAGTGGCGAGTGGTGGAGCACT
CAGGGAGCTGGCGGTGGAAACCTTTGGCGGTGGGCCAACCTCGCTGGCAC
CATGGCCCTGTACGCTGTTGAGTTATACCTCGGTGAGAACGACGACCTGG
ACTCCGGACTCGCTGGCCACTGGAAGACCGACTGAATGGAGCTGTCAAAT
ATCTGCGGTGCGACCTTCTGGCATCTTGTCGACTTGGACTGCGGAGATAC
CGCAGCCCTCATCGGATATGCTTGGCTCTTCAGATTTACAACTGTCGAGC
CGGACATGGACGTCTTGCGAAACCTACGGCTGAGGCCAATATTGCCCGGA
TTCTTCGACTTTTCAGGCTAGACTACGCCAGCCTCGCAGAGCATGCTTTT
CGCTGGAGATTCTAGAAAAAGCACTTCGAAGGCCAGCGTTGTCATTTTGC
TATCTCAGATACTCTTACATTTCTTTGAATGGGGACGGGAAGCACAAAAG
CTTTTCCCTTGGCCCTACTTGCAGCAATTACTCTGAATGAGTATATCGCT
CCGGAAATCCAGGTTACGGGGCAGCAAACAGCTATCGACCACACCCTTCA
CACAGCTATACCAAAGCCATGCAATCATTGCCCCTCCAGCTGGATGGGAA
TGATCCTGTATAGTCTGTGTCGGTCATGAGCACCCCGCCCGCGATGGCGG
ATTCAGTTATGGTGCACCCGGCTTGTTTTGCTGCCTTGCTGTCCCTTCTA
ACACCCTGTGGACCCCCTTCCACTGGGGTTTCAGGTACCCTCCTGCCTTT
CATCGCTCCTTTTTAAAACTGGTCCTCTCTCATTTACACTATGGTCTTGC
GAGCCACTCTTGTTATTATACCCCAGTCGTTTTGCTGAGTCGTCAATTTA
TTATTTTTCAATTCGCCATCAAGGATCATATAACAGCATGTATTGCCCCG
TCCCAGGCTTTGTTGCCTTTTGTGTGCCTTAGACGAGTTCTTATACCCAA
TGACAGTTTTGCGATGGAAGGTGAAATGTCTTCCCCCTGCCTGTAGCGAT
CTTGTATTGGTCATCTTCATGTTACACATAGCGCAGAATATCACCTGAGC
GGAATCAAGTTGCTGGCACCCCAGGTGAGCTATCCGGCCCTGTTAACCGG
ATAGGATAGTGAATGCATCAGACATGCATTTCGTCTACCCTATCAATGTA
GAGATCCGCACATGCGTCATGGGATCACATACCGCGACACGGACGAAGAA
CCATCAATTGCATTTTGGCCCTGCTGAGGGCTCGTTTGCCAACGTACGTC
AGGAATATAACAGATGCCAGGCGCATTGCCATCTCCGAAATGAACCGTGT
ATCCAGCACGCACTCATGCACTCCTTTACCCATAAAATGACGACAGTATG
CG back to topCoding sequence (CDS) from alignment at ch8:1768146..1771347- >KJC3_011819-T1 ID=KJC3_011819-T1|Name=KJC3_011819-T1|organism=Aspergillus niger KJC3|type=CDS|length=2652bp|location=Sequence derived from alignment at ch8:1768146..1771347- (Aspergillus niger KJC3)
ATCGGTCTCCTGGTACTCTCCGCCTCCATCATATCGAGCTCGGTATACTT
CCTGTGGCGAGTCCTCCAATTTCCCGAGATCTCAAATGTTGATGCCGCTT
TAATCGGGGTATCCATCACCTGTGCTGTGATCCTTTGCGCGTGGGGTATT
GGTAGTGGGCGAGGAAACCCAGTAGAAAGCTCTCTACTGTTCGCATACAT
CGTTCTTTGCATCTACCAGATCTTCACTGATTACCAGCCGTCACATCCTG
TGGAGCAAGTCCCTTCTCCCGCTCAAGCCGGGGATTTCCCACCGCTTCCT
CCTATTATCATGGCTTCCTACACGACCCTGATGCACGCCTTGTCCACCTT
GCCCTCCATCATCCACGCCGCCTTCAACGTCATCACCGCGGTATTCGGTG
CCGTCACCCCCTCCGTATTGATCTCGCTCACATACCGGATCCTTGTTCTG
TACGCATCGACTCGCATCATACCCGCTGTCCGCGAAGCGGGTGCACGAGC
TCTCTCCCAAGAAGCATCGTTGGATGACTCCGATGCGGCGGGCCAGTTCT
TGGGCGTACTCAGCTACTTCTCTCCGTCGATCCTGATCGCTGTATACACC
AGTCTCTTGATGCAGCACTTCGCCTCTACCTCTCAAGCAATGGGTGGCAG
TGGCGAGTGGTGGAGCACTCAGGGAGCTGGCGGTGGAAACCTTTGGCGGT
GGGCCAACCTCGCTGGCACCATGGCCCTGTACGCTGTTGAGTTATACCTC
GGTGAGAACGACGACCTGGACTCCGGACTCGCTGGCCACTGGAAGACCGA
CTGAATGTGGCTCTTCCGCGCCCTTTCGTCGGCCGTCTTTCTGGCCGTCA
CCGTCTCTTCCATTCCCCTCGCCTTTGATGTGGGTGGGAAAACATGCGGT
CTGGCCTATTCCTTGTCCCTGGCCACCTTCTACTTCCTATTTTCGCTTCT
GCGCCTCACTACGCCTGATCGGTCATGGCTCCGCTCCTCCCTGATCGTCG
TCATTAGCTCGACGCAATGGCTCATTATTCCGATTCTGCTTATCTGGTCG
CTGAACCGCTTCTCGATCGATACCGATAATGCTGGCTCTTGGGTGGAGCG
GACCTTCACGGGCAAGAGAGCCCACGACTCATCGATCCAGGAGTGGCTGT
TTGGGCCCGATGGGCTGGTAGAATCAGTGACTATCGGGAACTGGGATAAA
CTGCTGAGATGGTCGACCCCAGTTTTCCAGCTGGTTGAAGGATTCTGCAG
CTTATTGGTCATACAGGCTGCAGGGCAGATTACCCGCTGGCTTGTCAACC
GTGGTGGGCGAAGCGATAGTTGGATGATCGGTCTCCTGGTACTCTCCGCC
TCCATCATATCGAGCTCGGTATACTTCCTGTGGCGAGTCCTCCAATTTCC
CGAGATCTCAAATGTTGATGCCGCTTTAATCGGGGTATCCATCACCTGTG
CTGTGATCCTTTGCGCGTGGGGTATTGGTAGTGGGCGAGGAAACCCAGTA
GAAAGCTCTCTACTGTTCGCATACATCGTTCTTTGCATCTACCAGATCTT
CACTGATTACCAGCCGTCACATCCTGTGGAGCAAGTCCCTTCTCCCGCTC
AAGCCGGGGATTTCCCACCGCTTCCTCCTATTATCATGGCTTCCTACACG
ACCCTGATGCACGCCTTGTCCACCTTGCCCTCCATCATCCACGCCGCCTT
CAACGTCATCACCGCGGTATTCGGTGCCGTCACCCCCTCCGTATTGATCT
CGCTCACATACCGGATCCTTGTTCTGTACGCATCGACTCGCATCATACCC
GCTGTCCGCGAAGCGGGTGCACGAGCTCTCTCCCAAGAAGCATCGTTGGA
TGACTCCGATGCGGCGGGCCAGTTCTTGGGCGTACTCAGCTACTTCTCTC
CGTCGATCCTGATCGCTGTATACACCAGTCTCTTGATGCAGCACTTCGCC
TCTACCTCTCAAGCAATGGGTGGCAGTGGCGAGTGGTGGAGCACTCAGGG
AGCTGGCGGTGGAAACCTTTGGCGGTGGGCCAACCTCGCTGGCACCATGG
CCCTGTACGCTGTTGAGTTATACCTCGGTGAGAACGACGACCTGGACTCC
GGACTCGCTGGCCACTGGAAGACCGACTGAATGTGGCTCTTCCGCGCCCT
TTCGTCGGCCGTCTTTCTGGCCGTCACCGTCTCTTCCATTCCCCTCGCCT
TTGATGTGGGTGGGAAAACATGCGGTCTGGCCTATTCCTTGTCCCTGGCC
ACCTTCTACTTCCTATTTTCGCTTCTGCGCCTCACTACGCCTGATCGGTC
ATGGCTCCGCTCCTCCCTGATCGTCGTCATTAGCTCGACGCAATGGCTCA
TTATTCCGATTCTGCTTATCTGGTCGCTGAACCGCTTCTCGATCGATACC
GATAATGCTGGCTCTTGGGTGGAGCGGACCTTCACGGGCAAGAGAGCCCA
CGACTCATCGATCCAGGAGTGGCTGTTTGGGCCCGATGGGCTGGTAGAAT
CAGTGACTATCGGGAACTGGGATAAACTGCTGAGATGGTCGACCCCAGTT
TTCCAGCTGGTTGAAGGATTCTGCAGCTTATTGGTCATACAGGCTGCAGG
GCAGATTACCCGCTGGCTTGTCAACCGTGGTGGGCGAAGCGATAGTTGGA
TG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011819-T1.utr3p1 | KJC3_011819-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011819-T1.utr5p1 | KJC3_011819-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | BUSCO:EOG092640ET |
| DBxref | InterPro:IPR013635 |
| DBxref | PFAM:PF08426 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1768146..1771347 - |
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