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KJC3_011820-T1, KJC3_011820-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011820-T1
Unique NameKJC3_011820-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1771951..1773240+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011820-T1 ID=KJC3_011820-T1|Name=KJC3_011820-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1290bp|location=Sequence derived from alignment at ch8:1771951..1773240+ (Aspergillus niger KJC3)
CATTACTTTTACTTACTATACAGCAATTTCCATTTCTTGACCTTCTTCCA
TCTTTCCCTCCGCACTGCTGTTCATTGTTATATGCTCCGCTGGCGTCGAT
TCTTCACCATGGCCGAAACTGCTGCGAAGAAAGTCAAGACCTCCTCTCCC
TTGATCGGAACTCACAAGTAAGTGCTACGCGCAGAAGCTTCTTTCCCCGG
CTTCCCCTCCATTAATAGATTTGCGATTCGCTGACTCTTCCTCCTTCCCC
TGCGCAGTGGTCACTTCCACGCCGATGAGGCTCTTGCTGTCTATCTCCTC
CGTCTTCTGCCCACATACTCCTCCTCTCCTCTCCTCCGGACCAGAGACCC
CGCTCAATTAGCTACCTGCCACACCGTCGTCGACGTGGGCGGAGAGTACG
ACGCCGCCAGCAACCGCTATGATCACCACCAGCGCACTTTCGCAACCACC
TTTCCCAACCATAACACCAAGCTCTCCTCTGCGGGATTGGTGTACATGCA
CTTCGGTCGGGCCATCATCGCCCAGCACACCTCGTTGCCCTTGGACCATG
AGGACGTGACTCTCCTGTACGAGAAGCTTTACACCGATTTTATTGAGGCC
ATTGATGCCAACGATAATGGCGTCTCCGCCTACGACCCCGCCGCTATCTC
CGCTGCCAACATCCAGAAGCGCTTCAAGGATGGCGGAATCACCATCACCT
CCGTGGTGGGTGACATGAACAACCCGGACCCCACCTGCCCACCTGGGGAG
CCTCAGGACGAGGATAGTCTGTTCGCCAGAGCCAGTACGTTCATTGGAAA
CGTCTTTGCTCGCAAGTTGCACCACGCCGTTTCCTCCTGGCTGCCTGCGC
GGACCACCGTCGGCGCTGCTTACCGTTCCCGTCGGGACGTTCACCCGTCC
GGCCGGATCATCATCCTGCCCCAGGGTGGTGTGCCCTGGAAGGAGCACCT
CTACAACTTCGAGAAGGAAGCCTCTGGATCAGAGGAAACCAACCCCGATG
AAGAGGCTTACTATGTCCTGTACCCCGAGAGTGCGACAGAAGGTTCGAAA
TGGCGTGTGCAGTGCGTCTCTGTGAATGAGGGTAGCTTCGTGTCCCGCAA
GCCTCTTCCTGAGGCGTGGCGGGGTGTCCGCGATGCCGATCTCGATGGCG
TTATGGCTGCGGAGGCTGAAAAATCTGGAAAGCCCAAGGTGCCCGAGGGT
GCCGTTTTCGTTCACGCCAGTGGCTTCATTGGTGGCCACCAGACCAAGGA
GGGTGCCCTTGCCATGGCCACCCGTGGTCTGGAACAATAA
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Coding sequence (CDS) from alignment at ch8:1771951..1773240+

>KJC3_011820-T1 ID=KJC3_011820-T1|Name=KJC3_011820-T1|organism=Aspergillus niger KJC3|type=CDS|length=2238bp|location=Sequence derived from alignment at ch8:1771951..1773240+ (Aspergillus niger KJC3)
ATGCTCCGCTGGCGTCGATTCTTCACCATGGCCGAAACTGCTGCGAAGAA
AGTCAAGACCTCCTCTCCCTTGATCGGAACTCACAATGGTCACTTCCACG
CCGATGAGGCTCTTGCTGTCTATCTCCTCCGTCTTCTGCCCACATACTCC
TCCTCTCCTCTCCTCCGGACCAGAGACCCCGCTCAATTAGCTACCTGCCA
CACCGTCGTCGACGTGGGCGGAGAGTACGACGCCGCCAGCAACCGCTATG
ATCACCACCAGCGCACTTTCGCAACCACCTTTCCCAACCATAACACCAAG
CTCTCCTCTGCGGGATTGGTGTACATGCACTTCGGTCGGGCCATCATCGC
CCAGCACACCTCGTTGCCCTTGGACCATGAGGACGTGACTCTCCTGTACG
AGAAGCTTTACACCGATTTTATTGAGGCCATTGATGCCAACGATAATGGC
GTCTCCGCCTACGACCCCGCCGCTATCTCCGCTGCCAACATCCAGAAGCG
CTTCAAGGATGGCGGAATCACCATCACCTCCGTGGTGGGTGACATGAACA
ACCCGGACCCCACCTGCCCACCTGGGGAGCCTCAGGACGAGGATAGTCTG
TTCGCCAGAGCCAGTACGTTCATTGGAAACGTCTTTGCTCGCAAGTTGCA
CCACGCCGTTTCCTCCTGGCTGCCTGCGCGGACCACCGTCGGCGCTGCTT
ACCGTTCCCGTCGGGACGTTCACCCGTCCGGCCGGATCATCATCCTGCCC
CAGGGTGGTGTGCCCTGGAAGGAGCACCTCTACAACTTCGAGAAGGAAGC
CTCTGGATCAGAGGAAACCAACCCCGATGAAGAGGCTTACTATGTCCTGT
ACCCCGAGAGTGCGACAGAAGGTTCGAAATGGCGTGTGCAGTGCGTCTCT
GTGAATGAGGGTAGCTTCGTGTCCCGCAAGCCTCTTCCTGAGGCGTGGCG
GGGTGTCCGCGATGCCGATCTCGATGGCGTTATGGCTGCGGAGGCTGAAA
AATCTGGAAAGCCCAAGGTGCCCGAGGGTGCCGTTTTCGTTCACGCCAGT
GGCTTCATTGGTGGCCACCAGACCAAGGAGGGTGCCCTTGCCATGGCCAC
CCGTGGTCTGGAACAATAAATGCTCCGCTGGCGTCGATTCTTCACCATGG
CCGAAACTGCTGCGAAGAAAGTCAAGACCTCCTCTCCCTTGATCGGAACT
CACAATGGTCACTTCCACGCCGATGAGGCTCTTGCTGTCTATCTCCTCCG
TCTTCTGCCCACATACTCCTCCTCTCCTCTCCTCCGGACCAGAGACCCCG
CTCAATTAGCTACCTGCCACACCGTCGTCGACGTGGGCGGAGAGTACGAC
GCCGCCAGCAACCGCTATGATCACCACCAGCGCACTTTCGCAACCACCTT
TCCCAACCATAACACCAAGCTCTCCTCTGCGGGATTGGTGTACATGCACT
TCGGTCGGGCCATCATCGCCCAGCACACCTCGTTGCCCTTGGACCATGAG
GACGTGACTCTCCTGTACGAGAAGCTTTACACCGATTTTATTGAGGCCAT
TGATGCCAACGATAATGGCGTCTCCGCCTACGACCCCGCCGCTATCTCCG
CTGCCAACATCCAGAAGCGCTTCAAGGATGGCGGAATCACCATCACCTCC
GTGGTGGGTGACATGAACAACCCGGACCCCACCTGCCCACCTGGGGAGCC
TCAGGACGAGGATAGTCTGTTCGCCAGAGCCAGTACGTTCATTGGAAACG
TCTTTGCTCGCAAGTTGCACCACGCCGTTTCCTCCTGGCTGCCTGCGCGG
ACCACCGTCGGCGCTGCTTACCGTTCCCGTCGGGACGTTCACCCGTCCGG
CCGGATCATCATCCTGCCCCAGGGTGGTGTGCCCTGGAAGGAGCACCTCT
ACAACTTCGAGAAGGAAGCCTCTGGATCAGAGGAAACCAACCCCGATGAA
GAGGCTTACTATGTCCTGTACCCCGAGAGTGCGACAGAAGGTTCGAAATG
GCGTGTGCAGTGCGTCTCTGTGAATGAGGGTAGCTTCGTGTCCCGCAAGC
CTCTTCCTGAGGCGTGGCGGGGTGTCCGCGATGCCGATCTCGATGGCGTT
ATGGCTGCGGAGGCTGAAAAATCTGGAAAGCCCAAGGTGCCCGAGGGTGC
CGTTTTCGTTCACGCCAGTGGCTTCATTGGTGGCCACCAGACCAAGGAGG
GTGCCCTTGCCATGGCCACCCGTGGTCTGGAACAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011820KJC3_011820Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011820-T1.utr5p1KJC3_011820-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011820-T1.exon1KJC3_011820-T1.exon1Aspergillus niger KJC3exon
KJC3_011820-T1.exon2KJC3_011820-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011820-T1.cdsKJC3_011820-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011820-T1KJC3_011820-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926347K
DBxrefInterPro:IPR003226
DBxrefPFAM:PF03690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1771951..1773240 +
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