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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1773405..1775166- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011821-T1 ID=KJC3_011821-T1|Name=KJC3_011821-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1762bp|location=Sequence derived from alignment at ch8:1773405..1775166- (Aspergillus niger KJC3)
CTCGAATCTCCCCGAGGCAATCCCCGGTGTATGTCTGGGACTGACTTGGC
TTGGAACAAAAGTCGGGATCATCCCGTTTATTACTCCTTCCTCTTTTCAA
ATTACCCGCGCCATCTTCCGATGGATGATCTACAAATATCACTGTATAGC
CCACCGGGGGATCTGTTGATCGGAATGAAAGGCTGTATTTGGGCCCTCCT
TCATCCCTTCGAGACGTCGACTTGACGAATCTATATAGAAATACAACCCA
CAATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTT
CACGCCCAAACTGGGGTTACCCATCCCATCTCAGAGAAATGTGGCCGTTC
GGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCCGTGAGTCCCTCGTA
AAGGCTTGCTGAATCGACCGGGCAGTCATTAACAATCAGAATAGCTACCA
CTTCTTTCGCAATGTAAGCACCATGGACACCGTCACGACCTTCGGTGATA
CCACCGTAGCAAACGGCACAGTGCTGCAAGACGTCAAGACCGCGGATTTC
ATTGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAACCCGAG
CTACGAATACGTTTTTGCCGTAAACGATGCGGTGCACGAAGCCCCCGTCT
ACGTGGCATCGCAGAACAAGCTGTACCTCTCGCAGCTCGCGCCGCCGCCG
GGCTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCCAACATT
ATCAGAATACCTCTCCGATCCACCTGTCTATGCCCCCAATGGCGGAACAT
TCCATGACGGCAAAATCATCTGGGGCGCATCTGGCGGTAACAGATCGATT
GGCGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGAGACAAA
CAAGACAACAAGCCTGGTCAACAATTACTTTGGATACTACTTCAACACAA
TTGACGACCTCGCCGTGCATCCCAAGACCGGCGATATCTGGTTCACAGAT
CCACGTAAGTTCTACCATCTGCCATATGCTATGTGGATTTCGCTAATAAT
TATATACCCCAATGTACAGAATACTCCTGGTTCAATGATATCACAGACAC
CCCTCCCCAGCTTCCCTGCGCTAGTTACAGATATAACACTTCTTCTGGGG
CAGTGGTAGTTGTGGACGACTCAATCGGTCAGCCAAACGGGATCGCTTTC
ACTCCGGATGGATCTATCGTGTACATCAGCGATACTGCGGCAGTCAGCGC
TCCTATTGATCCTAAATATGGCCATCTGGGCAGTACGTTTAATACCACGC
ATCGGCGGTATGTAGAGCCTGATTTCTGATATACTCGAAGACCCGAAAGT
TGACTGACTCATCTCTTGTGTCCTTCTGTAGGACTATTTACGCGTTTGAC
GTGAGCGAGGATGGTGCCCACGCTTACAACAAACGGGCCATTTATCTGGC
ACCAGGCTTTGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTATATTT
TGACGGGGTGCGGTCGAGGTGTCGACGTTCTCGACCCCTCTGGGGAGCTG
CTCTTGACGGTTCAGACCAACTATACGGTCCAGAATTTCGCTTGGACGGG
TCCGGAACTGAAGACGCTATGGCTGATGGGCAATGGAGGAATCAGTAAGG
TCGAATGGAACCTGCCCGGCCAAGTGTTGAAATAAATGCTACATGGGTGA
CCAGTACGGTATCGCCCTGATATCTAATGTCTTATTACGAAGAAGCCGGT
TATAAAGGTTAC back to topCoding sequence (CDS) from alignment at ch8:1773405..1775166- >KJC3_011821-T1 ID=KJC3_011821-T1|Name=KJC3_011821-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch8:1773405..1775166- (Aspergillus niger KJC3)
GACTATTTACGCGTTTGACGTGAGCGAGGATGGTGCCCACGCTTACAACA
AACGGGCCATTTATCTGGCACCAGGCTTTGTCCCCGACGGGCTGAAAGTG
GCAGCGAACGGGTATATTTTGACGGGGTGCGGTCGAGGTGTCGACGTTCT
CGACCCCTCTGGGGAGCTGCTCTTGACGGTTCAGACCAACTATACGGTCC
AGAATTTCGCTTGGACGGGTCCGGAACTGAAGACGCTATGGCTGATGGGC
AATGGAGGAATCAGTAAGGTCGAATGGAACCTGCCCGGCCAAGTGTTGAA
ATAAAATACTCCTGGTTCAATGATATCACAGACACCCCTCCCCAGCTTCC
CTGCGCTAGTTACAGATATAACACTTCTTCTGGGGCAGTGGTAGTTGTGG
ACGACTCAATCGGTCAGCCAAACGGGATCGCTTTCACTCCGGATGGATCT
ATCGTGTACATCAGCGATACTGCGGCAGTCAGCGCTCCTATTGATCCTAA
ATATGGCCATCTGGGCAGTACGTTTAATACCACGCATCGGCGCTACCACT
TCTTTCGCAATGTAAGCACCATGGACACCGTCACGACCTTCGGTGATACC
ACCGTAGCAAACGGCACAGTGCTGCAAGACGTCAAGACCGCGGATTTCAT
TGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAACCCGAGCT
ACGAATACGTTTTTGCCGTAAACGATGCGGTGCACGAAGCCCCCGTCTAC
GTGGCATCGCAGAACAAGCTGTACCTCTCGCAGCTCGCGCCGCCGCCGGG
CTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCCAACATTAT
CAGAATACCTCTCCGATCCACCTGTCTATGCCCCCAATGGCGGAACATTC
CATGACGGCAAAATCATCTGGGGCGCATCTGGCGGTAACAGATCGATTGG
CGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGAGACAAACA
AGACAACAAGCCTGGTCAACAATTACTTTGGATACTACTTCAACACAATT
GACGACCTCGCCGTGCATCCCAAGACCGGCGATATCTGGTTCACAGATCC
ACATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTT
CACGCCCAAACTGGGGTTACCCATCCCATCTCAGAGAAATGTGGCCGTTC
GGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCCGACTATTTACGCGT
TTGACGTGAGCGAGGATGGTGCCCACGCTTACAACAAACGGGCCATTTAT
CTGGCACCAGGCTTTGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTA
TATTTTGACGGGGTGCGGTCGAGGTGTCGACGTTCTCGACCCCTCTGGGG
AGCTGCTCTTGACGGTTCAGACCAACTATACGGTCCAGAATTTCGCTTGG
ACGGGTCCGGAACTGAAGACGCTATGGCTGATGGGCAATGGAGGAATCAG
TAAGGTCGAATGGAACCTGCCCGGCCAAGTGTTGAAATAAAATACTCCTG
GTTCAATGATATCACAGACACCCCTCCCCAGCTTCCCTGCGCTAGTTACA
GATATAACACTTCTTCTGGGGCAGTGGTAGTTGTGGACGACTCAATCGGT
CAGCCAAACGGGATCGCTTTCACTCCGGATGGATCTATCGTGTACATCAG
CGATACTGCGGCAGTCAGCGCTCCTATTGATCCTAAATATGGCCATCTGG
GCAGTACGTTTAATACCACGCATCGGCGCTACCACTTCTTTCGCAATGTA
AGCACCATGGACACCGTCACGACCTTCGGTGATACCACCGTAGCAAACGG
CACAGTGCTGCAAGACGTCAAGACCGCGGATTTCATTGTGTATAACAAAG
AGAAAGGACTCGATATTCTAGGCTCGAACCCGAGCTACGAATACGTTTTT
GCCGTAAACGATGCGGTGCACGAAGCCCCCGTCTACGTGGCATCGCAGAA
CAAGCTGTACCTCTCGCAGCTCGCGCCGCCGCCGGGCTATCTCCCGCAGC
TGGTCATTGATCTCAACCAAGATCCTCCAACATTATCAGAATACCTCTCC
GATCCACCTGTCTATGCCCCCAATGGCGGAACATTCCATGACGGCAAAAT
CATCTGGGGCGCATCTGGCGGTAACAGATCGATTGGCGGGACTGAACAAC
GGATCTCCCTTAGAACATTAGATCCCGAGACAAACAAGACAACAAGCCTG
GTCAACAATTACTTTGGATACTACTTCAACACAATTGACGACCTCGCCGT
GCATCCCAAGACCGGCGATATCTGGTTCACAGATCCACATGCAAAGACTT
CTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTTCACGCCCAAACTGG
GGTTACCCATCCCATCTCAGAGAAATGTGGCCGTTCGGTCGTCTGCGTCA
ATCGCTATGCAAATGTGCTTCCGACTATTTACGCGTTTGACGTGAGCGAG
GATGGTGCCCACGCTTACAACAAACGGGCCATTTATCTGGCACCAGGCTT
TGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTATATTTTGACGGGGT
GCGGTCGAGGTGTCGACGTTCTCGACCCCTCTGGGGAGCTGCTCTTGACG
GTTCAGACCAACTATACGGTCCAGAATTTCGCTTGGACGGGTCCGGAACT
GAAGACGCTATGGCTGATGGGCAATGGAGGAATCAGTAAGGTCGAATGGA
ACCTGCCCGGCCAAGTGTTGAAATAAAATACTCCTGGTTCAATGATATCA
CAGACACCCCTCCCCAGCTTCCCTGCGCTAGTTACAGATATAACACTTCT
TCTGGGGCAGTGGTAGTTGTGGACGACTCAATCGGTCAGCCAAACGGGAT
CGCTTTCACTCCGGATGGATCTATCGTGTACATCAGCGATACTGCGGCAG
TCAGCGCTCCTATTGATCCTAAATATGGCCATCTGGGCAGTACGTTTAAT
ACCACGCATCGGCGCTACCACTTCTTTCGCAATGTAAGCACCATGGACAC
CGTCACGACCTTCGGTGATACCACCGTAGCAAACGGCACAGTGCTGCAAG
ACGTCAAGACCGCGGATTTCATTGTGTATAACAAAGAGAAAGGACTCGAT
ATTCTAGGCTCGAACCCGAGCTACGAATACGTTTTTGCCGTAAACGATGC
GGTGCACGAAGCCCCCGTCTACGTGGCATCGCAGAACAAGCTGTACCTCT
CGCAGCTCGCGCCGCCGCCGGGCTATCTCCCGCAGCTGGTCATTGATCTC
AACCAAGATCCTCCAACATTATCAGAATACCTCTCCGATCCACCTGTCTA
TGCCCCCAATGGCGGAACATTCCATGACGGCAAAATCATCTGGGGCGCAT
CTGGCGGTAACAGATCGATTGGCGGGACTGAACAACGGATCTCCCTTAGA
ACATTAGATCCCGAGACAAACAAGACAACAAGCCTGGTCAACAATTACTT
TGGATACTACTTCAACACAATTGACGACCTCGCCGTGCATCCCAAGACCG
GCGATATCTGGTTCACAGATCCACATGCAAAGACTTCTGCTGTTGCTCGC
ATCATTCACGGGCAGTCTCGTTCACGCCCAAACTGGGGTTACCCATCCCA
TCTCAGAGAAATGTGGCCGTTCGGTCGTCTGCGTCAATCGCTATGCAAAT
GTGCTTCCGACTATTTACGCGTTTGACGTGAGCGAGGATGGTGCCCACGC
TTACAACAAACGGGCCATTTATCTGGCACCAGGCTTTGTCCCCGACGGGC
TGAAAGTGGCAGCGAACGGGTATATTTTGACGGGGTGCGGTCGAGGTGTC
GACGTTCTCGACCCCTCTGGGGAGCTGCTCTTGACGGTTCAGACCAACTA
TACGGTCCAGAATTTCGCTTGGACGGGTCCGGAACTGAAGACGCTATGGC
TGATGGGCAATGGAGGAATCAGTAAGGTCGAATGGAACCTGCCCGGCCAA
GTGTTGAAATAAAATACTCCTGGTTCAATGATATCACAGACACCCCTCCC
CAGCTTCCCTGCGCTAGTTACAGATATAACACTTCTTCTGGGGCAGTGGT
AGTTGTGGACGACTCAATCGGTCAGCCAAACGGGATCGCTTTCACTCCGG
ATGGATCTATCGTGTACATCAGCGATACTGCGGCAGTCAGCGCTCCTATT
GATCCTAAATATGGCCATCTGGGCAGTACGTTTAATACCACGCATCGGCG
CTACCACTTCTTTCGCAATGTAAGCACCATGGACACCGTCACGACCTTCG
GTGATACCACCGTAGCAAACGGCACAGTGCTGCAAGACGTCAAGACCGCG
GATTTCATTGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAA
CCCGAGCTACGAATACGTTTTTGCCGTAAACGATGCGGTGCACGAAGCCC
CCGTCTACGTGGCATCGCAGAACAAGCTGTACCTCTCGCAGCTCGCGCCG
CCGCCGGGCTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCC
AACATTATCAGAATACCTCTCCGATCCACCTGTCTATGCCCCCAATGGCG
GAACATTCCATGACGGCAAAATCATCTGGGGCGCATCTGGCGGTAACAGA
TCGATTGGCGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGA
GACAAACAAGACAACAAGCCTGGTCAACAATTACTTTGGATACTACTTCA
ACACAATTGACGACCTCGCCGTGCATCCCAAGACCGGCGATATCTGGTTC
ACAGATCCACATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCA
GTCTCGTTCACGCCCAAACTGGGGTTACCCATCCCATCTCAGAGAAATGT
GGCCGTTCGGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011821-T1.utr3p1 | KJC3_011821-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR013658 |
| DBxref | PFAM:PF08450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1773405..1775166 - |
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