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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1789726..1793347- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011828-T1 ID=KJC3_011828-T1|Name=KJC3_011828-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3622bp|location=Sequence derived from alignment at ch8:1789726..1793347- (Aspergillus niger KJC3)
CTGCCAGTCTTCCACCTCAACTTCGTTCTTCCGTTTCTTCCTCTCGCTTC
TTCGCCTACTTCTTCCCCTCACCTGCTCTCCCATATATCAATTCGCATGC
CGCATGGTGCTGGGCTTACTTCTTGTCGACTACGTCCCAGCAAACTCCGT
ATTTGCTCTGTCCATTTTGAGAAACCCGTCCTCGTTTGTCCGGCTGCTGT
CGCCATCACTCTGGCTGCCTCTGCTGTAGTAGTACTTCCACTACAATTCC
AGCCATGGCGGCGCAGGCAGCTCTGATTGCCGACACCATTGTTGGCATGA
AGAGAGCCCTCCGCAAGGAGAATGACTGTGCGTCCTCTACTCTGTCCTCC
CCGCTGTCTCTATCTTTTCTTCTAACCGTTCGCTCTTGTCTAGACTCTGG
ACCTGACGATCCGATCACTCAACCAACAAATCGGGGCAATAAATTACACA
CGAACTCAAACTTCGTTCGGGAAGGTGCTCTGGGGTACATACATCCGGAA
GAGCTTTATAAACAGGTTATTTCCACCCCCGCGGCCATCGAGAGCTCTCT
TTTTCTGGGAGCATTAGTCGATCAAAGTGATGATGATAAAGAAGGAACGC
TGACGGCTAGAGGAACTTATCACTCCTTAGAAAATTGAACATGCTGGTTA
TACACGTTACATCCTCCAACCCAACCCCGTGCGCTATGATTCTGAAGGCG
ATGAGTTGGATGAGGATGACGAAGACTCCGAGGCTGATGCCGCTGCGGCG
GCAGAAAATCCATTCTCGGAAATAGTGCTCGAAAGTGAGGTTTTCTGTTT
CATCTCGACGCCTTGGGGTCTTCCCGCTAATCAGTCTTTACCATTGATCT
TTAGACTTTCTTTGCCCTCTAAAACACCCGTCCGAACTCCCTACCCATCC
TTCTCTGTCGCACGCTTATACGTCAAAGGCGCTGCTGCACATGACGCAGG
CAATCGAAGCCAAACTCCGTCAAGAAAGAGCACTGCTTTGGCGGGCCAGG
AATCTGCACCGGCAGTTTTTGGGAGACAGTTCTTGGATGCCATCTGGTGC
CGTGGAGACGTCTGAAGATAGATGGATCTTTGAGCCCCGCTTAGCTCATA
CGGCACGCAGCTCACCCGGAAGTCAATACAGACCTAACGGGACCGCAAGC
CCTTTGGTGCCAGGGCCTTCTGCCCAGAAAAACAGTGTGCAAGGCCCGTC
CGTGGGTGCAGGTGATTCAAAGTCGCCTTGGCCTTCCCAGAACGAGAATG
CTCAGGACAAACCCACTGCGGATAAGGATGTTGAGATGACGGATAGCCAT
GAGCAGGCGATGACTCACAAGGAAAATGCTGCGAATGCGCTTGAACAGCC
CCGAGAGCCGAAATCAGAAGAAGTTGATACCCCAGTTGGCGACCTGCCTC
ATCATTCAGAGACTATCAATCAAGTCGCACAAGTCAATGGAAGCCTCGCG
GCAAACGCAAAATCTGATGGGGATAAAATGACGGACTCAGATGGCACTTT
GGACAAGGGTGGCAAGGAGCGCGAAGGTGCCACAATCCAGGGAATCGCGC
AGCCCGATCCCGAAATCCGAGACGATGCACAGGTAGACGGGACGGATGCA
GATGCAGATGCAGAAATGCAAGATGGATCATCTCCCGAGCCACCTCGGCG
CATGACGACCCGGGCACAGGCTAATGCAGCGAACCCACAGGAGGGCGAAT
CCGGACGCCTCTCGCCGTCCCCATCTGACGACACATTAGGGAGTCTTCCG
ACGCCGCACCCTCTTTTCCTTATACCGGACTCTGTTCGACCAGATTCAAA
CTTCGGCCTCCCGCCCAACGAAGCGGAAGAGACACGTCGACTGCTCTGGT
CTTATGTACAGAAGCAAGAGGAGACCGTTCGTGGATTCGAGCATATGCTG
GAGTCTCTGCTCCGGGCCAATCGGATGAAAGAGGACGTGCTCGAGTGGTG
CAAAGCGGAGGGGCACGTGGGCGAGATGAGTGACGGAGAAGACTGGTATG
ATCGAGAGAAATGGGGCCTTGCCGAAGGGGAAGACCTTAAGAAGGGTGCT
GACGAGGATGAAATCGAACCCGTGGAGGAGAGCCGGACGTCGACCAAGAG
AGGCAGAGGTCGACGGGCATAGGCTGGATCCTTGTTGAAGTCGACAGGCG
TTTTGGCTTTGGATGTCTCTCCGATGCAGCTCTTGCCATCTGCGCGCTTA
TATCACTTGCACTTTCCAAAAACTCATAGCGTGGAGTTGGCGGCGTTTTG
GGGAGGTAAACCAGGTGTCCCAATTTAGGCTACCACCGACAGATGGTGCG
AGTGAGATGGTCTTTCCTCCCTCTTTTTCTTTGACGGGAATATGGATAGT
GAAACAGGTGCTTTGATTTACCATCCCTGGTGGGAGTATGGTGTGATTTT
ATGATAGTTGATGATCATGGCGAAAGCGCACAAGCGTAGCAAATGATACC
CGTTGTTCCTGTTTATCTATACTTGAGTAGGAGACTGCCATGTGGTAGGT
CAACGTTGTAGTAATTTTCCTTCTCCGTTCTATCTTAGCATCTCAATGTA
TCCCGCTTTCCGTTTTCTTTTGTTCCTTCTCAGTGGCTATACGTGGCCAG
CTGTTTTTGCTATTTCCTGCCCTATCCTGCCCCTTGCTCTCGCTCTCATT
CTAGCTCTCCACCTCTTCCTTCATCTTCTTACTGGACAAAACCAGACTGC
CTAGCCGATCATGGCATGCAGTCCCATGTAGATGCAGAAACAGTAGCTTG
GCGAGTCCTGTGTTTGCACTCCGGGACTGATGGGACTAAAAGAATGTCGA
AAGGTCCAAGCTCCGCTGGCGGAGGCAGATTGGCGGTAAATCAGACCCCG
GACATATATCCCTGTCAAGCCTCGGCTTACAAGCTCTTGCCGCCGCTCTT
GGATTTGGCGCGCTCGCGTTCCCGCTTGGCGTAGATTTCCGCCGTAAAGG
GACTACCAGGCCCGGGTCAGTGGGTTTCTACCATTTCCGTGCATGGGGGG
GATGAATTCTCATTTTGCGTTGGGGCTCGAGACACATGTGCATATGGGCT
TTGGTTGCAAAAAAGACGAGTAAAGGCAAGTCCATGGTGCATAGTGGGCC
ATATAAGAAAGATAGATGGGATACTTACTCCTCCCACTGGAGAGCGAACC
AGTACAGGATGAAGACCTCGGCCGTCAGGAAGACACCCGCCACCTTGCCC
TTGTAGAGAGCAACGCCCAAGAAGTTCAGAGTACTGCCCCAGTACATGGG
GGAACCAGTAACGTTGAAGGGGAAGCCGGTGACAGGCGCATCCATCAGGA
TACCGAAGTAGTCGCCAAGGTAAGTGCCGGTGACACCGAGGGCATACATG
CTGGACAGGACGAGGACGGAGCCGAAGGCGAAGAGAAGGCCGCCGAGGAC
GGGTTGGTGCACAGGGGCATAATAAGGTTGGTCTTCCAGGGCCACTTGGT
AGACATGGTCTCGCAAAATTCCCAGACTGAAGATGGTGACAGCGAGGAAG
TAGCAGCCGTAGTAGGCGTTACCGAATATACGAGTCAAGAAGTGACTCCG
ATACTCTACAGAATGATATGACCGAGGAAATTTGTCATAAGCCTCTTATA
CTGAAATGGAGGAAGAAGAGGT back to topCoding sequence (CDS) from alignment at ch8:1789726..1793347- >KJC3_011828-T1 ID=KJC3_011828-T1|Name=KJC3_011828-T1|organism=Aspergillus niger KJC3|type=CDS|length=6468bp|location=Sequence derived from alignment at ch8:1789726..1793347- (Aspergillus niger KJC3)
ACTTTCTTTGCCCTCTAAAACACCCGTCCGAACTCCCTACCCATCCTTCT
CTGTCGCACGCTTATACGTCAAAGGCGCTGCTGCACATGACGCAGGCAAT
CGAAGCCAAACTCCGTCAAGAAAGAGCACTGCTTTGGCGGGCCAGGAATC
TGCACCGGCAGTTTTTGGGAGACAGTTCTTGGATGCCATCTGGTGCCGTG
GAGACGTCTGAAGATAGATGGATCTTTGAGCCCCGCTTAGCTCATACGGC
ACGCAGCTCACCCGGAAGTCAATACAGACCTAACGGGACCGCAAGCCCTT
TGGTGCCAGGGCCTTCTGCCCAGAAAAACAGTGTGCAAGGCCCGTCCGTG
GGTGCAGGTGATTCAAAGTCGCCTTGGCCTTCCCAGAACGAGAATGCTCA
GGACAAACCCACTGCGGATAAGGATGTTGAGATGACGGATAGCCATGAGC
AGGCGATGACTCACAAGGAAAATGCTGCGAATGCGCTTGAACAGCCCCGA
GAGCCGAAATCAGAAGAAGTTGATACCCCAGTTGGCGACCTGCCTCATCA
TTCAGAGACTATCAATCAAGTCGCACAAGTCAATGGAAGCCTCGCGGCAA
ACGCAAAATCTGATGGGGATAAAATGACGGACTCAGATGGCACTTTGGAC
AAGGGTGGCAAGGAGCGCGAAGGTGCCACAATCCAGGGAATCGCGCAGCC
CGATCCCGAAATCCGAGACGATGCACAGGTAGACGGGACGGATGCAGATG
CAGATGCAGAAATGCAAGATGGATCATCTCCCGAGCCACCTCGGCGCATG
ACGACCCGGGCACAGGCTAATGCAGCGAACCCACAGGAGGGCGAATCCGG
ACGCCTCTCGCCGTCCCCATCTGACGACACATTAGGGAGTCTTCCGACGC
CGCACCCTCTTTTCCTTATACCGGACTCTGTTCGACCAGATTCAAACTTC
GGCCTCCCGCCCAACGAAGCGGAAGAGACACGTCGACTGCTCTGGTCTTA
TGTACAGAAGCAAGAGGAGACCGTTCGTGGATTCGAGCATATGCTGGAGT
CTCTGCTCCGGGCCAATCGGATGAAAGAGGACGTGCTCGAGTGGTGCAAA
GCGGAGGGGCACGTGGGCGAGATGAGTGACGGAGAAGACTGGTATGATCG
AGAGAAATGGGGCCTTGCCGAAGGGGAAGACCTTAAGAAGGGTGCTGACG
AGGATGAAATCGAACCCGTGGAGGAGAGCCGGACGTCGACCAAGAGAGGC
AGAGGTCGACGGGCATAGAAAATTGAACATGCTGGTTATACACGTTACAT
CCTCCAACCCAACCCCGTGCGCTATGATTCTGAAGGCGATGAGTTGGATG
AGGATGACGAAGACTCCGAGGCTGATGCCGCTGCGGCGGCAGAAAATCCA
TTCTCGGAAATAGTGCTCGAAAACTCTGGACCTGACGATCCGATCACTCA
ACCAACAAATCGGGGCAATAAATTACACACGAACTCAAACTTCGTTCGGG
AAGGTGCTCTGGGGTACATACATCCGGAAGAGCTTTATAAACAGATGGCG
GCGCAGGCAGCTCTGATTGCCGACACCATTGTTGGCATGAAGAGAGCCCT
CCGCAAGGAGAATGACTACTTTCTTTGCCCTCTAAAACACCCGTCCGAAC
TCCCTACCCATCCTTCTCTGTCGCACGCTTATACGTCAAAGGCGCTGCTG
CACATGACGCAGGCAATCGAAGCCAAACTCCGTCAAGAAAGAGCACTGCT
TTGGCGGGCCAGGAATCTGCACCGGCAGTTTTTGGGAGACAGTTCTTGGA
TGCCATCTGGTGCCGTGGAGACGTCTGAAGATAGATGGATCTTTGAGCCC
CGCTTAGCTCATACGGCACGCAGCTCACCCGGAAGTCAATACAGACCTAA
CGGGACCGCAAGCCCTTTGGTGCCAGGGCCTTCTGCCCAGAAAAACAGTG
TGCAAGGCCCGTCCGTGGGTGCAGGTGATTCAAAGTCGCCTTGGCCTTCC
CAGAACGAGAATGCTCAGGACAAACCCACTGCGGATAAGGATGTTGAGAT
GACGGATAGCCATGAGCAGGCGATGACTCACAAGGAAAATGCTGCGAATG
CGCTTGAACAGCCCCGAGAGCCGAAATCAGAAGAAGTTGATACCCCAGTT
GGCGACCTGCCTCATCATTCAGAGACTATCAATCAAGTCGCACAAGTCAA
TGGAAGCCTCGCGGCAAACGCAAAATCTGATGGGGATAAAATGACGGACT
CAGATGGCACTTTGGACAAGGGTGGCAAGGAGCGCGAAGGTGCCACAATC
CAGGGAATCGCGCAGCCCGATCCCGAAATCCGAGACGATGCACAGGTAGA
CGGGACGGATGCAGATGCAGATGCAGAAATGCAAGATGGATCATCTCCCG
AGCCACCTCGGCGCATGACGACCCGGGCACAGGCTAATGCAGCGAACCCA
CAGGAGGGCGAATCCGGACGCCTCTCGCCGTCCCCATCTGACGACACATT
AGGGAGTCTTCCGACGCCGCACCCTCTTTTCCTTATACCGGACTCTGTTC
GACCAGATTCAAACTTCGGCCTCCCGCCCAACGAAGCGGAAGAGACACGT
CGACTGCTCTGGTCTTATGTACAGAAGCAAGAGGAGACCGTTCGTGGATT
CGAGCATATGCTGGAGTCTCTGCTCCGGGCCAATCGGATGAAAGAGGACG
TGCTCGAGTGGTGCAAAGCGGAGGGGCACGTGGGCGAGATGAGTGACGGA
GAAGACTGGTATGATCGAGAGAAATGGGGCCTTGCCGAAGGGGAAGACCT
TAAGAAGGGTGCTGACGAGGATGAAATCGAACCCGTGGAGGAGAGCCGGA
CGTCGACCAAGAGAGGCAGAGGTCGACGGGCATAGAAAATTGAACATGCT
GGTTATACACGTTACATCCTCCAACCCAACCCCGTGCGCTATGATTCTGA
AGGCGATGAGTTGGATGAGGATGACGAAGACTCCGAGGCTGATGCCGCTG
CGGCGGCAGAAAATCCATTCTCGGAAATAGTGCTCGAAAACTCTGGACCT
GACGATCCGATCACTCAACCAACAAATCGGGGCAATAAATTACACACGAA
CTCAAACTTCGTTCGGGAAGGTGCTCTGGGGTACATACATCCGGAAGAGC
TTTATAAACAGATGGCGGCGCAGGCAGCTCTGATTGCCGACACCATTGTT
GGCATGAAGAGAGCCCTCCGCAAGGAGAATGACTACTTTCTTTGCCCTCT
AAAACACCCGTCCGAACTCCCTACCCATCCTTCTCTGTCGCACGCTTATA
CGTCAAAGGCGCTGCTGCACATGACGCAGGCAATCGAAGCCAAACTCCGT
CAAGAAAGAGCACTGCTTTGGCGGGCCAGGAATCTGCACCGGCAGTTTTT
GGGAGACAGTTCTTGGATGCCATCTGGTGCCGTGGAGACGTCTGAAGATA
GATGGATCTTTGAGCCCCGCTTAGCTCATACGGCACGCAGCTCACCCGGA
AGTCAATACAGACCTAACGGGACCGCAAGCCCTTTGGTGCCAGGGCCTTC
TGCCCAGAAAAACAGTGTGCAAGGCCCGTCCGTGGGTGCAGGTGATTCAA
AGTCGCCTTGGCCTTCCCAGAACGAGAATGCTCAGGACAAACCCACTGCG
GATAAGGATGTTGAGATGACGGATAGCCATGAGCAGGCGATGACTCACAA
GGAAAATGCTGCGAATGCGCTTGAACAGCCCCGAGAGCCGAAATCAGAAG
AAGTTGATACCCCAGTTGGCGACCTGCCTCATCATTCAGAGACTATCAAT
CAAGTCGCACAAGTCAATGGAAGCCTCGCGGCAAACGCAAAATCTGATGG
GGATAAAATGACGGACTCAGATGGCACTTTGGACAAGGGTGGCAAGGAGC
GCGAAGGTGCCACAATCCAGGGAATCGCGCAGCCCGATCCCGAAATCCGA
GACGATGCACAGGTAGACGGGACGGATGCAGATGCAGATGCAGAAATGCA
AGATGGATCATCTCCCGAGCCACCTCGGCGCATGACGACCCGGGCACAGG
CTAATGCAGCGAACCCACAGGAGGGCGAATCCGGACGCCTCTCGCCGTCC
CCATCTGACGACACATTAGGGAGTCTTCCGACGCCGCACCCTCTTTTCCT
TATACCGGACTCTGTTCGACCAGATTCAAACTTCGGCCTCCCGCCCAACG
AAGCGGAAGAGACACGTCGACTGCTCTGGTCTTATGTACAGAAGCAAGAG
GAGACCGTTCGTGGATTCGAGCATATGCTGGAGTCTCTGCTCCGGGCCAA
TCGGATGAAAGAGGACGTGCTCGAGTGGTGCAAAGCGGAGGGGCACGTGG
GCGAGATGAGTGACGGAGAAGACTGGTATGATCGAGAGAAATGGGGCCTT
GCCGAAGGGGAAGACCTTAAGAAGGGTGCTGACGAGGATGAAATCGAACC
CGTGGAGGAGAGCCGGACGTCGACCAAGAGAGGCAGAGGTCGACGGGCAT
AGAAAATTGAACATGCTGGTTATACACGTTACATCCTCCAACCCAACCCC
GTGCGCTATGATTCTGAAGGCGATGAGTTGGATGAGGATGACGAAGACTC
CGAGGCTGATGCCGCTGCGGCGGCAGAAAATCCATTCTCGGAAATAGTGC
TCGAAAACTCTGGACCTGACGATCCGATCACTCAACCAACAAATCGGGGC
AATAAATTACACACGAACTCAAACTTCGTTCGGGAAGGTGCTCTGGGGTA
CATACATCCGGAAGAGCTTTATAAACAGATGGCGGCGCAGGCAGCTCTGA
TTGCCGACACCATTGTTGGCATGAAGAGAGCCCTCCGCAAGGAGAATGAC
TACTTTCTTTGCCCTCTAAAACACCCGTCCGAACTCCCTACCCATCCTTC
TCTGTCGCACGCTTATACGTCAAAGGCGCTGCTGCACATGACGCAGGCAA
TCGAAGCCAAACTCCGTCAAGAAAGAGCACTGCTTTGGCGGGCCAGGAAT
CTGCACCGGCAGTTTTTGGGAGACAGTTCTTGGATGCCATCTGGTGCCGT
GGAGACGTCTGAAGATAGATGGATCTTTGAGCCCCGCTTAGCTCATACGG
CACGCAGCTCACCCGGAAGTCAATACAGACCTAACGGGACCGCAAGCCCT
TTGGTGCCAGGGCCTTCTGCCCAGAAAAACAGTGTGCAAGGCCCGTCCGT
GGGTGCAGGTGATTCAAAGTCGCCTTGGCCTTCCCAGAACGAGAATGCTC
AGGACAAACCCACTGCGGATAAGGATGTTGAGATGACGGATAGCCATGAG
CAGGCGATGACTCACAAGGAAAATGCTGCGAATGCGCTTGAACAGCCCCG
AGAGCCGAAATCAGAAGAAGTTGATACCCCAGTTGGCGACCTGCCTCATC
ATTCAGAGACTATCAATCAAGTCGCACAAGTCAATGGAAGCCTCGCGGCA
AACGCAAAATCTGATGGGGATAAAATGACGGACTCAGATGGCACTTTGGA
CAAGGGTGGCAAGGAGCGCGAAGGTGCCACAATCCAGGGAATCGCGCAGC
CCGATCCCGAAATCCGAGACGATGCACAGGTAGACGGGACGGATGCAGAT
GCAGATGCAGAAATGCAAGATGGATCATCTCCCGAGCCACCTCGGCGCAT
GACGACCCGGGCACAGGCTAATGCAGCGAACCCACAGGAGGGCGAATCCG
GACGCCTCTCGCCGTCCCCATCTGACGACACATTAGGGAGTCTTCCGACG
CCGCACCCTCTTTTCCTTATACCGGACTCTGTTCGACCAGATTCAAACTT
CGGCCTCCCGCCCAACGAAGCGGAAGAGACACGTCGACTGCTCTGGTCTT
ATGTACAGAAGCAAGAGGAGACCGTTCGTGGATTCGAGCATATGCTGGAG
TCTCTGCTCCGGGCCAATCGGATGAAAGAGGACGTGCTCGAGTGGTGCAA
AGCGGAGGGGCACGTGGGCGAGATGAGTGACGGAGAAGACTGGTATGATC
GAGAGAAATGGGGCCTTGCCGAAGGGGAAGACCTTAAGAAGGGTGCTGAC
GAGGATGAAATCGAACCCGTGGAGGAGAGCCGGACGTCGACCAAGAGAGG
CAGAGGTCGACGGGCATAGAAAATTGAACATGCTGGTTATACACGTTACA
TCCTCCAACCCAACCCCGTGCGCTATGATTCTGAAGGCGATGAGTTGGAT
GAGGATGACGAAGACTCCGAGGCTGATGCCGCTGCGGCGGCAGAAAATCC
ATTCTCGGAAATAGTGCTCGAAAACTCTGGACCTGACGATCCGATCACTC
AACCAACAAATCGGGGCAATAAATTACACACGAACTCAAACTTCGTTCGG
GAAGGTGCTCTGGGGTACATACATCCGGAAGAGCTTTATAAACAGATGGC
GGCGCAGGCAGCTCTGATTGCCGACACCATTGTTGGCATGAAGAGAGCCC
TCCGCAAGGAGAATGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011828-T1.utr3p1 | KJC3_011828-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011828-T1.utr5p1 | KJC3_011828-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013904 |
| DBxref | PFAM:PF08595 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1789726..1793347 - |
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