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KJC3_011833-T1, KJC3_011833-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011833-T1
Unique NameKJC3_011833-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1805775..1807387+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011833-T1 ID=KJC3_011833-T1|Name=KJC3_011833-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1613bp|location=Sequence derived from alignment at ch8:1805775..1807387+ (Aspergillus niger KJC3)
CGACCGACCGCTCGACGATATCGACAATTCCCTCGCGGACACACCACAGC
CCACGCAGTCAAGATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCC
CCGAGAATGGTGAGCATTCGATTATTCCCCGATCTTTGTCGCTCTGTTCG
CTGGGTGGACGCGGAGGAGGATCTGGCCGGAGGGACAGGCATGGCATCGA
GGATTCTGGGGGACTTTTAGGAGGCTGAGGAAAGCGCTGCGCCAGCTACA
ACCGGCAATCGCTAGGGGGAGAGAATAAAAGAAGAGAGATGCTACACTGA
ATGCCTGTCCCTGCGATCTATTCTTGCGATTCAATTTTGCGTGATATGAT
GGAAAAGGACATGGGACTGATTCGAATTTCCTCCTACAGTGAAGGTTCAC
ATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGGTATGCAAATTTT
CCAACAATCCACCACGACCCGGCCATTTGGAACAATATCGACCAATATGT
TCCTCGTGGCGTGTTGTGACCTACGGCTCGAGCTATGTGCCGCACCCGTC
TGTATTCAGCGACACTAACATGGGTCCTTTTCCCTCCTCTTACAGGCAAG
CTCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAA
GAATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTT
CCCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACC
AAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAA
CGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCA
GGTATGCCGAAATCAATTCACTCGCACACGCATCGAAGACTGGGGGATGA
GCCGGGATCAAACCAAAGGATTATTCTCTTTCCTTTTCCCGGTTGGGTTC
TGGCTTCTACCTACCAGTGCTTGGTCAATTATCATGTTACTGGGAGGAGA
CATTTTGCTGATGGGTATTGCGTTCTACAGAAACTTCTTGGGTGAGAAGT
ACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCC
AACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTC
CCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATA
TCCGTAAGGTAAGAAAAATGCCGCCTCCCTTTGGTTTCTCGTGAGAGAAA
ATATCGAGACCGTCACTGACATGAATGATTTTGCACAGTTCCTTGACGGT
CTGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAAACGGTGGTTGT
CCGCCTTGGTGGGTAGTGACGGATGTCTGGAGAATCTCTTTTTTTCGCCT
ACTTGCATAGGGAAGCAACGCGGAATTTAAAACCAAAATCATGGAATTCA
AATGCCCCTTGACGTGTCTACGGATCGGGATGACTCCTTGTACCTCCGTT
GGGAGAGAGTGTGTGTGCGTGGTGTGTAGACAAAAAAATACCGGTCGGCT
TTTACTGAGCAATCCAAATATCCTCTTTTTTGTTCATCGACTTCTTAAGT
CGTATTCTCTGCG
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Coding sequence (CDS) from alignment at ch8:1805775..1807387+

>KJC3_011833-T1 ID=KJC3_011833-T1|Name=KJC3_011833-T1|organism=Aspergillus niger KJC3|type=CDS|length=2895bp|location=Sequence derived from alignment at ch8:1805775..1807387+ (Aspergillus niger KJC3)
ATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTGAA
GGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGGCAAGC
TCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAG
AATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTC
CCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACCA
AGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAAC
GTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAG
AAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCG
TTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGT
AACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTG
CCGTGTCCGCAACAAGGATATCCGTAAGTTCCTTGACGGTCTGTACGTGT
CGGAGCGTGGTAACATTGTCGAGGAGTAAATGCGGTACATTTACTCCGAG
GAACGGCTGCCCATCCCCGAGAATGTGAAGGTTCACATTCGCTCGCGCAT
TGTGACCGTTGAGGGACCCCGAGGCAAGCTCGTCAAGGACCTCTCCCACA
TTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATG
CACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCT
CATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGC
GCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGAAGAACCCC
GAGACCGGTCTGCACGACGTTGAGATCAGAAACTTCTTGGGTGAGAAGTA
CGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCA
ACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCC
CAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATAT
CCGTAAGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCG
AGGAGTAAATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAG
AATGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCG
AGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCC
CCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGA
ATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGG
TGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTC
CCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTT
GAGATCAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCA
GCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCC
TCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAG
CAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGTTCCTTGACGGTCT
GTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAAATGCGGTACATTT
ACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTGAAGGTTCACATTCGC
TCGCGCATTGTGACCGTTGAGGGACCCCGAGGCAAGCTCGTCAAGGACCT
CTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCA
TTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTC
CGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTA
CAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGA
AGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGAAACTTCTTGGGT
GAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCAC
CTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGG
GTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAAC
AAGGATATCCGTAAGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAA
CATTGTCGAGGAGTAAATGCGGTACATTTACTCCGAGGAACGGCTGCCCA
TCCCCGAGAATGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAG
GGACCCCGAGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGTCACCTT
CGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCC
GCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTG
ATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGC
TCACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGC
ACGACGTTGAGATCAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTG
ACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGA
GCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCG
ACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGTTCCTT
GACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL9BKJC3_011833Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011833-T1KJC3_011833-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011833-T1.utr5p1KJC3_011833-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011833-T1.exon1KJC3_011833-T1.exon1Aspergillus niger KJC3exon
KJC3_011833-T1.exon2KJC3_011833-T1.exon2Aspergillus niger KJC3exon
KJC3_011833-T1.exon3KJC3_011833-T1.exon3Aspergillus niger KJC3exon
KJC3_011833-T1.exon4KJC3_011833-T1.exon4Aspergillus niger KJC3exon
KJC3_011833-T1.exon5KJC3_011833-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011833-T1.cdsKJC3_011833-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011833-T1.utr3p1KJC3_011833-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002359
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR000702
DBxrefInterPro:IPR020040
DBxrefPFAM:PF00347
Product60S ribosomal protein L9B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1805775..1807387 +
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