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KJC3_011835-T1, KJC3_011835-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011835-T1
Unique NameKJC3_011835-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1811209..1812855-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011835-T1 ID=KJC3_011835-T1|Name=KJC3_011835-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1647bp|location=Sequence derived from alignment at ch8:1811209..1812855- (Aspergillus niger KJC3)
ATGGATGCGACCAGAAATGTCGAACTGGCGAGGCCTGGCAGCCATGGGCA
AAACAAAGTCGCACAGATATCCCAACTGGGAGAGAAACACGAGCAGGAGG
GTCTCGAAGCATCGAGGTACAAGCCGCAATTGCGTTGTAACCGCTCGGTC
TTCACTCTTCTTTTCCAGACATTAGCCATTGCGGCGATCCCCTTTGGAGA
AGGAGGGCCTCTCCTCGATGCCATCTATGGCGGTGGCCCATTGTCCGTCT
TCGTCGGCTGGATCGTCGTTTGCCTCTTATGCGAGTGTATCGCCCTCTCG
CTTGCTGAGCTCGCGTCTCGATATCCCACCTCAGCTGGGCCCTACTACTG
GTCCTACCGGGTTGCAGGACGCTCCAAAGCAGCTGTATCCTTCGTTACCT
GTTGGGTCTGGCTGATTGGCAACTGGACCATCACTCTATCGGTCAACTTC
GGGTTGGCATCGATAGTCTCGGCCTCGATCTCAATGTTCCATCCAGAATG
GACAATTACTAGCTGGCAACTTCTGCTGATCTTATACGCCGTCTTGTTGG
GAGCATTCTTCATCTGTACATTCGGTAACCGGTATCTACCTCAGGTGGAC
ATGATCAGCGCAGCCTGGACGGTGCTGACAATTCTCGTCATCCTCATTGC
GCTCTCTGTCAAGGCGGGTGCCGGCAGGCATAGTGCTGCCTACGCATTAG
GTCACTACGACTCCAGCTTGTCGGGATGGTCGGGCTTCTCCTTCTTCATC
GGACTTCTCGCGCCTGCATACACGTTCTGTGCCATCGGCATGGTTTCCTC
CATGGCAGAAGAATGCAACAAGCCAGCCGTGGAGGTACCATGGGCCCTCA
GTCTCTGTGTCCCTGTGGGGGGTATAGCAGGTCTATTCTTCGTCCTTCCC
ATCTGCTTCACTCTCCCTCCTCTGGAAGATATAATCAATGCCCCTGTTGG
CCAAGCTCTGCCATATATTTTCCATGTAGTCATGGACAGTCCCGGCGGCG
GCCTTGGCCTCACTGTGCTTGTTTTAGTAGTCAATTTCTGCGCTAGCATC
AGCATTACCGTCTGTGCTTCACGAGCCAGTTGGGCCATCGCTCGAGACGA
CGCTATCCCCCTCTCGCGACTATGGGCGCGTGTACACCCGGGCCTTGGCG
TACCTGTCTGGTCCTTGACCTTTGGTACCATCATTCAGATGCTTCTAGGG
CTCATTAACCTTGGCAGCAGCAGCGCCTTCACTGCCTTTGTCTCTGCGGG
CGTCATTGCACTAGCAGCCTCGTACGCCATTCCCATTGCACTGAGCCTTC
TGAACGGCCGTCGCGAGGTATCCCAAGCTCCATGGACCTGCGGTCCCATC
CTTGGGCCAATCGTCAACGTCATCGCCTTGTGTTGGATTGCGTTCGAGTT
GGTTATTTTTAGTATGCCAACCTCGTTGCCAGTCACTCGCGTTTCCATGA
ATTACGGCTCTGTTGTCGTTGTAGGGTTCATGGCTATCTCGGCATTCTGG
TACGCTGTGTATGCGCGGAAATGTATGTCTCCTCCATTCCACTCCATACC
ACATGATTTTCTAGATAGTAGCTAACCATATAATAGCTTTCAAGGGTCCG
CTGGCATCAATTGAGATGATGTGACTTTATGTTGATTCTAATGTCAG
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Coding sequence (CDS) from alignment at ch8:1811209..1812855-

>KJC3_011835-T1 ID=KJC3_011835-T1|Name=KJC3_011835-T1|organism=Aspergillus niger KJC3|type=CDS|length=3120bp|location=Sequence derived from alignment at ch8:1811209..1812855- (Aspergillus niger KJC3)
CTTTCAAGGGTCCGCTGGCATCAATTGAGATGATGTGAATGGATGCGACC
AGAAATGTCGAACTGGCGAGGCCTGGCAGCCATGGGCAAAACAAAGTCGC
ACAGATATCCCAACTGGGAGAGAAACACGAGCAGGAGGGTCTCGAAGCAT
CGAGGTACAAGCCGCAATTGCGTTGTAACCGCTCGGTCTTCACTCTTCTT
TTCCAGACATTAGCCATTGCGGCGATCCCCTTTGGAGAAGGAGGGCCTCT
CCTCGATGCCATCTATGGCGGTGGCCCATTGTCCGTCTTCGTCGGCTGGA
TCGTCGTTTGCCTCTTATGCGAGTGTATCGCCCTCTCGCTTGCTGAGCTC
GCGTCTCGATATCCCACCTCAGCTGGGCCCTACTACTGGTCCTACCGGGT
TGCAGGACGCTCCAAAGCAGCTGTATCCTTCGTTACCTGTTGGGTCTGGC
TGATTGGCAACTGGACCATCACTCTATCGGTCAACTTCGGGTTGGCATCG
ATAGTCTCGGCCTCGATCTCAATGTTCCATCCAGAATGGACAATTACTAG
CTGGCAACTTCTGCTGATCTTATACGCCGTCTTGTTGGGAGCATTCTTCA
TCTGTACATTCGGTAACCGGTATCTACCTCAGGTGGACATGATCAGCGCA
GCCTGGACGGTGCTGACAATTCTCGTCATCCTCATTGCGCTCTCTGTCAA
GGCGGGTGCCGGCAGGCATAGTGCTGCCTACGCATTAGGTCACTACGACT
CCAGCTTGTCGGGATGGTCGGGCTTCTCCTTCTTCATCGGACTTCTCGCG
CCTGCATACACGTTCTGTGCCATCGGCATGGTTTCCTCCATGGCAGAAGA
ATGCAACAAGCCAGCCGTGGAGGTACCATGGGCCCTCAGTCTCTGTGTCC
CTGTGGGGGGTATAGCAGGTCTATTCTTCGTCCTTCCCATCTGCTTCACT
CTCCCTCCTCTGGAAGATATAATCAATGCCCCTGTTGGCCAAGCTCTGCC
ATATATTTTCCATGTAGTCATGGACAGTCCCGGCGGCGGCCTTGGCCTCA
CTGTGCTTGTTTTAGTAGTCAATTTCTGCGCTAGCATCAGCATTACCGTC
TGTGCTTCACGAGCCAGTTGGGCCATCGCTCGAGACGACGCTATCCCCCT
CTCGCGACTATGGGCGCGTGTACACCCGGGCCTTGGCGTACCTGTCTGGT
CCTTGACCTTTGGTACCATCATTCAGATGCTTCTAGGGCTCATTAACCTT
GGCAGCAGCAGCGCCTTCACTGCCTTTGTCTCTGCGGGCGTCATTGCACT
AGCAGCCTCGTACGCCATTCCCATTGCACTGAGCCTTCTGAACGGCCGTC
GCGAGGTATCCCAAGCTCCATGGACCTGCGGTCCCATCCTTGGGCCAATC
GTCAACGTCATCGCCTTGTGTTGGATTGCGTTCGAGTTGGTTATTTTTAG
TATGCCAACCTCGTTGCCAGTCACTCGCGTTTCCATGAATTACGGCTCTG
TTGTCGTTGTAGGGTTCATGGCTATCTCGGCATTCTGGTACGCTGTGTAT
GCGCGGAAATCTTTCAAGGGTCCGCTGGCATCAATTGAGATGATGTGAAT
GGATGCGACCAGAAATGTCGAACTGGCGAGGCCTGGCAGCCATGGGCAAA
ACAAAGTCGCACAGATATCCCAACTGGGAGAGAAACACGAGCAGGAGGGT
CTCGAAGCATCGAGGTACAAGCCGCAATTGCGTTGTAACCGCTCGGTCTT
CACTCTTCTTTTCCAGACATTAGCCATTGCGGCGATCCCCTTTGGAGAAG
GAGGGCCTCTCCTCGATGCCATCTATGGCGGTGGCCCATTGTCCGTCTTC
GTCGGCTGGATCGTCGTTTGCCTCTTATGCGAGTGTATCGCCCTCTCGCT
TGCTGAGCTCGCGTCTCGATATCCCACCTCAGCTGGGCCCTACTACTGGT
CCTACCGGGTTGCAGGACGCTCCAAAGCAGCTGTATCCTTCGTTACCTGT
TGGGTCTGGCTGATTGGCAACTGGACCATCACTCTATCGGTCAACTTCGG
GTTGGCATCGATAGTCTCGGCCTCGATCTCAATGTTCCATCCAGAATGGA
CAATTACTAGCTGGCAACTTCTGCTGATCTTATACGCCGTCTTGTTGGGA
GCATTCTTCATCTGTACATTCGGTAACCGGTATCTACCTCAGGTGGACAT
GATCAGCGCAGCCTGGACGGTGCTGACAATTCTCGTCATCCTCATTGCGC
TCTCTGTCAAGGCGGGTGCCGGCAGGCATAGTGCTGCCTACGCATTAGGT
CACTACGACTCCAGCTTGTCGGGATGGTCGGGCTTCTCCTTCTTCATCGG
ACTTCTCGCGCCTGCATACACGTTCTGTGCCATCGGCATGGTTTCCTCCA
TGGCAGAAGAATGCAACAAGCCAGCCGTGGAGGTACCATGGGCCCTCAGT
CTCTGTGTCCCTGTGGGGGGTATAGCAGGTCTATTCTTCGTCCTTCCCAT
CTGCTTCACTCTCCCTCCTCTGGAAGATATAATCAATGCCCCTGTTGGCC
AAGCTCTGCCATATATTTTCCATGTAGTCATGGACAGTCCCGGCGGCGGC
CTTGGCCTCACTGTGCTTGTTTTAGTAGTCAATTTCTGCGCTAGCATCAG
CATTACCGTCTGTGCTTCACGAGCCAGTTGGGCCATCGCTCGAGACGACG
CTATCCCCCTCTCGCGACTATGGGCGCGTGTACACCCGGGCCTTGGCGTA
CCTGTCTGGTCCTTGACCTTTGGTACCATCATTCAGATGCTTCTAGGGCT
CATTAACCTTGGCAGCAGCAGCGCCTTCACTGCCTTTGTCTCTGCGGGCG
TCATTGCACTAGCAGCCTCGTACGCCATTCCCATTGCACTGAGCCTTCTG
AACGGCCGTCGCGAGGTATCCCAAGCTCCATGGACCTGCGGTCCCATCCT
TGGGCCAATCGTCAACGTCATCGCCTTGTGTTGGATTGCGTTCGAGTTGG
TTATTTTTAGTATGCCAACCTCGTTGCCAGTCACTCGCGTTTCCATGAAT
TACGGCTCTGTTGTCGTTGTAGGGTTCATGGCTATCTCGGCATTCTGGTA
CGCTGTGTATGCGCGGAAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011835KJC3_011835Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011835-T1KJC3_011835-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011835-T1.cdsKJC3_011835-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011835-T1.utr3p1KJC3_011835-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011835-T1.exon2KJC3_011835-T1.exon2Aspergillus niger KJC3exon
KJC3_011835-T1.exon1KJC3_011835-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1811209..1812855 -
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