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KJC3_011842-T1, KJC3_011842-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011842-T1
Unique NameKJC3_011842-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1828536..1830058-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011842-T1 ID=KJC3_011842-T1|Name=KJC3_011842-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1523bp|location=Sequence derived from alignment at ch8:1828536..1830058- (Aspergillus niger KJC3)
AAGTTCAAGATCGACTACCTAATATTCACTTTCTCTTCGTGGCTCGGTTG
AAAGCCGGTCTTAATTCACGCTGGTTCTGCAGCATGATGCATCAGCAATT
TTCTCTCGAATGCAGCCAACCACACCCCGTCTACTCAAGCAATGCTGCCA
TGAGTGACGCCGCAACAGGCGTGGCGCGGGGGAAAAGACATGCGGCCTGT
GATGAGTGCAGTATGTCTGACTTCTTGTCAAGATGAAGTACAAATTGTCT
GGTGCTAATCATGTTTCATCATTCTAGGAAGTCGCAAGCTGAAATGCTCA
GGGGAAGCTACTGGCTGCACTCGCTGCATTAAACAAAGTCTCACTTGCCA
CTACTCTCTACAGAAACAGATGGGACGGCCCCCAAAGAAGCGAATGCGAG
AAGATGAGGATCCATCACCACCTTTCGGCCTACCAGGGAATGAGCCATGG
ACCAGTGAATCGGATTTTGCTTCCCTTGGACCGTCGACCATAGAGTCAAC
CGAGACCGCCCCATCAGACTACAGCGGGCAGATAAATTTCTTTACGGACG
CAAATAGCAACATTGACGCTGGGCAATTCCTCCTCAACAAGCCGATAGAT
GCAGCACCAACGACAGTCAGTCCATGGCCTGATTTCTCCAATGTCTCTTC
ATCAGCAGCCAATCTTTACACTCTCCCACCAGATCTATCCTTACTCCAAC
AGTCCTCTGCCGCCTCGTCTCCGAACTCAGAGGAATCTGACCGCCAGTGC
CCTTGTCTATCCTGCCTCTACCTCTGTCTCAGCCACCTGTCTTCTCTCGC
CCCATTCCCCCTCTCCCACCACAACCTATGCTCCCTCTACATCGCATCCA
GAACCGCCCGAGCCGTCATCCGCTGCCAGATCTGTCCCCTCCGCTTCACA
ACAGGCATGCAAAATGTCACCTTCACCGGCACCTTATTGACCGTCATCGC
CGATACCTGGCTACGCATATCCAAAGTTAACGCCGTCGACTTCGGCCGAC
AATCGGCACCACCGGCTTACGCCGCAGCAATAGATGCCTCCCCCAACCCT
GCAAAAGGCTGGGAGGACTGGCTACGGCAAACCGTGCGATACCGTGTAAT
AGGAGGGCCGTGTGATCCGGCCGGTATGCCCCCGGGTGCAGATGATGGAC
CTAGTCTGCTTAGCCTTATAGAGGAAATGGAGGAGCGGCAACGGCGTTGG
CATCGTTCACACCCGCTGCCTGTCGAGGAACGTCATCTTCCTATACCGAA
GACGGACGGGTCCAAGGAGGAGGAATCGTGCCATGAGCGGGATGCGCTGT
GCATGCGCATCATTCAGAGCGCGCGCAATGTCATTCCAAAGTTTGGTTTC
CAGCCAAGTGATTATCCGGATGATGCGGTTGCCAAGAAGACCGCTTGATC
TGGGACTGCCGGCATCTTCGATATAGAGGCTTGTGTTGGTGATAATGTGG
CTATATGCGGGAAGCCATGTCTATATTAATGCCGGGGTTTGAATTAACGA
CACCTAAACTTACGATTTTACGC
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Coding sequence (CDS) from alignment at ch8:1828536..1830058-

>KJC3_011842-T1 ID=KJC3_011842-T1|Name=KJC3_011842-T1|organism=Aspergillus niger KJC3|type=CDS|length=2496bp|location=Sequence derived from alignment at ch8:1828536..1830058- (Aspergillus niger KJC3)
GAAGTCGCAAGCTGAAATGCTCAGGGGAAGCTACTGGCTGCACTCGCTGC
ATTAAACAAAGTCTCACTTGCCACTACTCTCTACAGAAACAGATGGGACG
GCCCCCAAAGAAGCGAATGCGAGAAGATGAGGATCCATCACCACCTTTCG
GCCTACCAGGGAATGAGCCATGGACCAGTGAATCGGATTTTGCTTCCCTT
GGACCGTCGACCATAGAGTCAACCGAGACCGCCCCATCAGACTACAGCGG
GCAGATAAATTTCTTTACGGACGCAAATAGCAACATTGACGCTGGGCAAT
TCCTCCTCAACAAGCCGATAGATGCAGCACCAACGACAGTCAGTCCATGG
CCTGATTTCTCCAATGTCTCTTCATCAGCAGCCAATCTTTACACTCTCCC
ACCAGATCTATCCTTACTCCAACAGTCCTCTGCCGCCTCGTCTCCGAACT
CAGAGGAATCTGACCGCCAGTGCCCTTGTCTATCCTGCCTCTACCTCTGT
CTCAGCCACCTGTCTTCTCTCGCCCCATTCCCCCTCTCCCACCACAACCT
ATGCTCCCTCTACATCGCATCCAGAACCGCCCGAGCCGTCATCCGCTGCC
AGATCTGTCCCCTCCGCTTCACAACAGGCATGCAAAATGTCACCTTCACC
GGCACCTTATTGACCGTCATCGCCGATACCTGGCTACGCATATCCAAAGT
TAACGCCGTCGACTTCGGCCGACAATCGGCACCACCGGCTTACGCCGCAG
CAATAGATGCCTCCCCCAACCCTGCAAAAGGCTGGGAGGACTGGCTACGG
CAAACCGTGCGATACCGTGTAATAGGAGGGCCGTGTGATCCGGCCGGTAT
GCCCCCGGGTGCAGATGATGGACCTAGTCTGCTTAGCCTTATAGAGGAAA
TGGAGGAGCGGCAACGGCGTTGGCATCGTTCACACCCGCTGCCTGTCGAG
GAACGTCATCTTCCTATACCGAAGACGGACGGGTCCAAGGAGGAGGAATC
GTGCCATGAGCGGGATGCGCTGTGCATGCGCATCATTCAGAGCGCGCGCA
ATGTCATTCCAAAGTTTGGTTTCCAGCCAAGTGATTATCCGGATGATGCG
GTTGCCAAGAAGACCGCTTGAATGATGCATCAGCAATTTTCTCTCGAATG
CAGCCAACCACACCCCGTCTACTCAAGCAATGCTGCCATGAGTGACGCCG
CAACAGGCGTGGCGCGGGGGAAAAGACATGCGGCCTGTGATGAGTGCAGA
AGTCGCAAGCTGAAATGCTCAGGGGAAGCTACTGGCTGCACTCGCTGCAT
TAAACAAAGTCTCACTTGCCACTACTCTCTACAGAAACAGATGGGACGGC
CCCCAAAGAAGCGAATGCGAGAAGATGAGGATCCATCACCACCTTTCGGC
CTACCAGGGAATGAGCCATGGACCAGTGAATCGGATTTTGCTTCCCTTGG
ACCGTCGACCATAGAGTCAACCGAGACCGCCCCATCAGACTACAGCGGGC
AGATAAATTTCTTTACGGACGCAAATAGCAACATTGACGCTGGGCAATTC
CTCCTCAACAAGCCGATAGATGCAGCACCAACGACAGTCAGTCCATGGCC
TGATTTCTCCAATGTCTCTTCATCAGCAGCCAATCTTTACACTCTCCCAC
CAGATCTATCCTTACTCCAACAGTCCTCTGCCGCCTCGTCTCCGAACTCA
GAGGAATCTGACCGCCAGTGCCCTTGTCTATCCTGCCTCTACCTCTGTCT
CAGCCACCTGTCTTCTCTCGCCCCATTCCCCCTCTCCCACCACAACCTAT
GCTCCCTCTACATCGCATCCAGAACCGCCCGAGCCGTCATCCGCTGCCAG
ATCTGTCCCCTCCGCTTCACAACAGGCATGCAAAATGTCACCTTCACCGG
CACCTTATTGACCGTCATCGCCGATACCTGGCTACGCATATCCAAAGTTA
ACGCCGTCGACTTCGGCCGACAATCGGCACCACCGGCTTACGCCGCAGCA
ATAGATGCCTCCCCCAACCCTGCAAAAGGCTGGGAGGACTGGCTACGGCA
AACCGTGCGATACCGTGTAATAGGAGGGCCGTGTGATCCGGCCGGTATGC
CCCCGGGTGCAGATGATGGACCTAGTCTGCTTAGCCTTATAGAGGAAATG
GAGGAGCGGCAACGGCGTTGGCATCGTTCACACCCGCTGCCTGTCGAGGA
ACGTCATCTTCCTATACCGAAGACGGACGGGTCCAAGGAGGAGGAATCGT
GCCATGAGCGGGATGCGCTGTGCATGCGCATCATTCAGAGCGCGCGCAAT
GTCATTCCAAAGTTTGGTTTCCAGCCAAGTGATTATCCGGATGATGCGGT
TGCCAAGAAGACCGCTTGAATGATGCATCAGCAATTTTCTCTCGAATGCA
GCCAACCACACCCCGTCTACTCAAGCAATGCTGCCATGAGTGACGCCGCA
ACAGGCGTGGCGCGGGGGAAAAGACATGCGGCCTGTGATGAGTGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011842KJC3_011842Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011842-T1KJC3_011842-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011842-T1.cdsKJC3_011842-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011842-T1.utr3p1KJC3_011842-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011842-T1.exon2KJC3_011842-T1.exon2Aspergillus niger KJC3exon
KJC3_011842-T1.exon1KJC3_011842-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011842-T1.utr5p1KJC3_011842-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1828536..1830058 -
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