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KJC3_011843-T1, KJC3_011843-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011843-T1
Unique NameKJC3_011843-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1830269..1832635+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011843-T1 ID=KJC3_011843-T1|Name=KJC3_011843-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2367bp|location=Sequence derived from alignment at ch8:1830269..1832635+ (Aspergillus niger KJC3)
ATGAGTGCTGCAAAGGTTTCCAAGAAGCGCAAGGCTGTCACCAAAGATGT
CGAGGAGGAGGCCGGTGTGTTCTCTGGCGACGAATTGAACGTCGGCGACA
TTGATGGTGCGCTTTCGGACGATGCCAACGACCTATCGAGCGACGAGGAG
GATTCCGAAGTTGAATTGGTGGACGACTTCAGCTCAGATGAGGATGAAGA
TGAAGAGGAGGAGTTGGACAGCGATGAGATCCCCTCCGACGGAGAGGCGC
CTCTCAAGAAGAAGTCCGGCACATCAGCTGCGGACCTAGAAGTACCTACG
AATGACGACGAGAGCTCCAGCGAGGAAGAGCAACCCAACTTCCGCATTGA
AAAGGATGCCAATGGAAACGACCGTTACATCTACGACGAGATCAACCCAG
ATGACAACTCCGATTACTCTGACGTCGAAGAGAATGCGAACACGATCGGT
AACATTCCGTTGTCTTTCTACGACCAGTACCCCCACATTGGCTACGACAT
CAATGGAAAGAAGATCATGCGTCCTGCCACTGGTGAGGCTCTGGATGCTT
TGCTTGACAGCATTGAGATCCCCAAGGGCTTCACCGGTCTGACTGATCCC
TCGACCGGTAAGCCTCTGGAGTTGAGCCAGGATGAGCTGGAGCTGCTGCG
CAAGGTGCAGATGAACGAAATTCCCGAGGAGGGCTACAACCCGTACGAGC
CTTTGATGGAATGGTTCAGTAACAAGCAGGAAATCATGCCCCTTAGTGCT
GCTCCGGAACCCAAGCGTCGCTTCGTTCCGTCAAAGCACGAAGCCAAGCG
GGTCATGAAGATTGTGAAGGCCATCCGCGAAGGTCGCATCCTGCCTTACA
AGCCCCCGTCGGAAGAGAAGGAGGAGGACCTCGAGCTTATCAATTATGAC
CTGTGGGCGGACGAGGCCGAGCGTCCGGACCACCCCATGCACGTTCCTGC
CCCCAAGCTCCCCCCGCCAGGCTACGAGGAGAGTTACCACCCGCCTCCGG
AGTATCTCCCCGACAACAAGGAGCGCAAGGCCTGGCAGGAGGCCGACCCC
GAAGACCGGGAGCGGGAATATCTCCCTACCGACTTTGGCTCTCTCCGCAA
GGTTCCTGGTTACGGCGAGTTTGTCAAGGAGAAGTTCGAGCGTTGCTTGG
ATCTCTACTTGGCTCCTAGAGTTCGCCGCAGCAAGCTCAACATCGACCCG
GAGAGTCTGCTCCCCAAGCTGCCCAGCCCTGAAGAGTTGAAGCCGTTCCC
GTCCGTCTGCGCTACGGTGTTCCGGGGACACAAGGGCCGTGTTCGTTCCC
TTGCCGTCGACCCTACGGGCGTGTGGCTCGCCACTGGTGGTGACGATGGT
ACCGTCCGCGTTTGGGAATTGCTCACCGGTCGCCAGCTGTATAGCGTCAA
GGTTGGTGAAGAGGATCCTGTCAACGTTGTCCGCTGGAGGCCCAGCAAGG
ATGCTGTGGTCCTAGCTGCCGCCGCGGGTGACGATATCTACCTCATCGTG
CCCCCGATCCTCGACCCCGAACTCGAGCAAGCCAGCTTGGATCTTCTCGA
CGCCGGCTGGGGATACGCCGCTTCGAAGCCTGCCCCGAAGGCCTCGGAAG
AAGGCAAGAAGACCACGCCTCCCCAGTGGGTGCGTCCCTCGGCCGCTCTC
GCCGACAATGGCGTGTGCGCCGTCATTCCCCTCCGCTACGTGGCCAAGTC
TATCTCGTGGCATCGCCGCGGTGACTACTTTGTTACCGTCTGCCCGGGCT
CTTCTACCCCGGCATCCATGGCCATTGCCATCCACACTCTTTCCAAGCAC
TTGACCCAGTACCCCTTCAGCCGACGCATCAAGGGTGGTGGCCCGCCCCA
GACCGCGCACTTCCACCCCTCGAAGCCCATCCTCTTCGTCGCCAACCAGC
GCACCGTTCGTGCTTACGATCTCTCCCGCCAACTGCTCGTCAAGATCATT
CAGCCCGGTGCCCGCTGGATCTCCTCCTTCGACATCCACCCGACCTCCTC
CACCGCTTCGGGAGGAGACAACCTCATTGTCGGATCCTACGACCGCCGTC
TGCTGTGGCATGATCTCGAACTCTCCCAGCGCCCCTACAAGACTCTCCGT
TACCACCGCAAGGCCATTCGTGCCGTCAAGTTCCACCCCAGTGGCCGCTA
CCCTCTGTTCGCGGATGCCAGTGACGACGGCTCGCTCCAGATCTTCCACG
GCAGTGTCACGGGTGACATGCTCAGCAATGCCAGCATTGTGCCCCTCAAG
GTTCTTAAGGGCCACAAGATCACCGGCGAGCTCGGTGTCATGGATCTTGA
CTGGCACCCGCGCGAAGCCTGGTGTGTCAGTGCCGGTGCGGATGGAACCT
GCCGGTTATGGATGTAA
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Coding sequence (CDS) from alignment at ch8:1830269..1832635+

>KJC3_011843-T1 ID=KJC3_011843-T1|Name=KJC3_011843-T1|organism=Aspergillus niger KJC3|type=CDS|length=2367bp|location=Sequence derived from alignment at ch8:1830269..1832635+ (Aspergillus niger KJC3)
ATGAGTGCTGCAAAGGTTTCCAAGAAGCGCAAGGCTGTCACCAAAGATGT
CGAGGAGGAGGCCGGTGTGTTCTCTGGCGACGAATTGAACGTCGGCGACA
TTGATGGTGCGCTTTCGGACGATGCCAACGACCTATCGAGCGACGAGGAG
GATTCCGAAGTTGAATTGGTGGACGACTTCAGCTCAGATGAGGATGAAGA
TGAAGAGGAGGAGTTGGACAGCGATGAGATCCCCTCCGACGGAGAGGCGC
CTCTCAAGAAGAAGTCCGGCACATCAGCTGCGGACCTAGAAGTACCTACG
AATGACGACGAGAGCTCCAGCGAGGAAGAGCAACCCAACTTCCGCATTGA
AAAGGATGCCAATGGAAACGACCGTTACATCTACGACGAGATCAACCCAG
ATGACAACTCCGATTACTCTGACGTCGAAGAGAATGCGAACACGATCGGT
AACATTCCGTTGTCTTTCTACGACCAGTACCCCCACATTGGCTACGACAT
CAATGGAAAGAAGATCATGCGTCCTGCCACTGGTGAGGCTCTGGATGCTT
TGCTTGACAGCATTGAGATCCCCAAGGGCTTCACCGGTCTGACTGATCCC
TCGACCGGTAAGCCTCTGGAGTTGAGCCAGGATGAGCTGGAGCTGCTGCG
CAAGGTGCAGATGAACGAAATTCCCGAGGAGGGCTACAACCCGTACGAGC
CTTTGATGGAATGGTTCAGTAACAAGCAGGAAATCATGCCCCTTAGTGCT
GCTCCGGAACCCAAGCGTCGCTTCGTTCCGTCAAAGCACGAAGCCAAGCG
GGTCATGAAGATTGTGAAGGCCATCCGCGAAGGTCGCATCCTGCCTTACA
AGCCCCCGTCGGAAGAGAAGGAGGAGGACCTCGAGCTTATCAATTATGAC
CTGTGGGCGGACGAGGCCGAGCGTCCGGACCACCCCATGCACGTTCCTGC
CCCCAAGCTCCCCCCGCCAGGCTACGAGGAGAGTTACCACCCGCCTCCGG
AGTATCTCCCCGACAACAAGGAGCGCAAGGCCTGGCAGGAGGCCGACCCC
GAAGACCGGGAGCGGGAATATCTCCCTACCGACTTTGGCTCTCTCCGCAA
GGTTCCTGGTTACGGCGAGTTTGTCAAGGAGAAGTTCGAGCGTTGCTTGG
ATCTCTACTTGGCTCCTAGAGTTCGCCGCAGCAAGCTCAACATCGACCCG
GAGAGTCTGCTCCCCAAGCTGCCCAGCCCTGAAGAGTTGAAGCCGTTCCC
GTCCGTCTGCGCTACGGTGTTCCGGGGACACAAGGGCCGTGTTCGTTCCC
TTGCCGTCGACCCTACGGGCGTGTGGCTCGCCACTGGTGGTGACGATGGT
ACCGTCCGCGTTTGGGAATTGCTCACCGGTCGCCAGCTGTATAGCGTCAA
GGTTGGTGAAGAGGATCCTGTCAACGTTGTCCGCTGGAGGCCCAGCAAGG
ATGCTGTGGTCCTAGCTGCCGCCGCGGGTGACGATATCTACCTCATCGTG
CCCCCGATCCTCGACCCCGAACTCGAGCAAGCCAGCTTGGATCTTCTCGA
CGCCGGCTGGGGATACGCCGCTTCGAAGCCTGCCCCGAAGGCCTCGGAAG
AAGGCAAGAAGACCACGCCTCCCCAGTGGGTGCGTCCCTCGGCCGCTCTC
GCCGACAATGGCGTGTGCGCCGTCATTCCCCTCCGCTACGTGGCCAAGTC
TATCTCGTGGCATCGCCGCGGTGACTACTTTGTTACCGTCTGCCCGGGCT
CTTCTACCCCGGCATCCATGGCCATTGCCATCCACACTCTTTCCAAGCAC
TTGACCCAGTACCCCTTCAGCCGACGCATCAAGGGTGGTGGCCCGCCCCA
GACCGCGCACTTCCACCCCTCGAAGCCCATCCTCTTCGTCGCCAACCAGC
GCACCGTTCGTGCTTACGATCTCTCCCGCCAACTGCTCGTCAAGATCATT
CAGCCCGGTGCCCGCTGGATCTCCTCCTTCGACATCCACCCGACCTCCTC
CACCGCTTCGGGAGGAGACAACCTCATTGTCGGATCCTACGACCGCCGTC
TGCTGTGGCATGATCTCGAACTCTCCCAGCGCCCCTACAAGACTCTCCGT
TACCACCGCAAGGCCATTCGTGCCGTCAAGTTCCACCCCAGTGGCCGCTA
CCCTCTGTTCGCGGATGCCAGTGACGACGGCTCGCTCCAGATCTTCCACG
GCAGTGTCACGGGTGACATGCTCAGCAATGCCAGCATTGTGCCCCTCAAG
GTTCTTAAGGGCCACAAGATCACCGGCGAGCTCGGTGTCATGGATCTTGA
CTGGCACCCGCGCGAAGCCTGGTGTGTCAGTGCCGGTGCGGATGGAACCT
GCCGGTTATGGATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERB1KJC3_011843Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011843-T1.exon1KJC3_011843-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011843-T1.cdsKJC3_011843-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011843-T1KJC3_011843-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092612LP
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR028598
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR012953
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
DBxrefPFAM:PF08145
ProductRibosome bioproteinsis protein erb1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1830269..1832635 +
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