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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1835655..1837399+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011845-T1 ID=KJC3_011845-T1|Name=KJC3_011845-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1745bp|location=Sequence derived from alignment at ch8:1835655..1837399+ (Aspergillus niger KJC3)
CGCCGGTTTCTGACTGCTTCCCCTCAAGCATCCTCGGAAACAAAGCAACA
TGCGCTGACAATGGGAAACACAAATAGCACCCACAAGATCTCTGCTCAGG
ACCGGTGAGCCTATCCATATCATTCCAATGTGTTTCGCCCTGTTGCTGTC
TCCATCAGGGCCGTTTGGCACGGGTCACGAGCCCCATCCCCCCGTCTCCG
ACCGATAAACTAACGCTCGTAACGCTCAGGGCAATCCTCGACCTCAAGAA
CCAGCGAGACAAACTTCACCAGTATCAGAAGCGGATTACTGTCTTGACAG
ACCGCGAAACTGAAATTGCGAAACAATGTCTCGCCCGGGATGACCGCAAG
CGCGCCCTGCTTGCCCTGCGTCGCAAGAAGTACCAGGAGTCGCTGCTCGA
CAAGACCGACAAACAACTCGAGCAGCTCGAACAGCTTACGGGTCAGATTG
AGTTTGCACTGGTTCAGAAGGATGTTCTGTTCGGCTTGCAGCAAGGGACC
AAGGTTCTGCAGACCATTAACAAGGAAATGGGTGGTCTTGAGGGGGTCGA
GAAGCTGATGGGCGAGACGGAGGAAGCGAGAGCTTATCAAGAGGTAAGAG
CTTATTGTCAATGGTTATCTGAGAAGGGTATTCTGGATTGGATGCTGACG
AGTCGGTGGTGGTTTGTACAGGAAATCAGCGAGATGCTTGCTGGACGCTT
GTCCACTCAGGATGAGGATGAGGTCGAAGAGGAACTCGAGGCTTTGCAGC
GGGATACGCAGGGTCCGGTTGTCCTGCCAAATGCGCCCAGCTCTACACTC
CCAGAGCATGTGGGGGGAGTCAAGGAGGACGAGCATGCGGTGGAAGAAGA
GGCCCACGTCGAGGAGCGGACGGCGATTCCTGCTTGAGACTGCCATCCAT
ATGATCTCTTTATATGACTTTAGCATTGCCGGCGTTGGTGGTTTCAGGAC
TTTCAAGTATAGTATAGCATTGTTAGATATGTTTCGCTATTTGAATGCTA
GCAACTAGATCGTTGAAACATGGATTGGCGTGCATTATCTTGATAGAGCC
CAGCTCAATACCCAAGGCAGTACCCGTAGTTTCCGATCATCCATTTCAGT
CTCTCACAGACCTCGTACATCCCAGGCCAGCATTTGACCATCCATGTTCG
AACAAACACTGAAATCCTATCCCTTATCACCTCCGCTCACAGAATCCTGC
TCCCCACTCCATTCACACCCTGAATAGCAACATGATCACCTGGGTTCGCA
GCCGCCTCATACAAGAAACTGATCGGCTCCCTATTCAATGCCATGAACTG
TCCCTTGAAACCAATATACCCGACCTTGGTGACGTCTTCTTCCCCATCGC
TCCAATTATCCTCGAAGAAGAGAGTGATGGAAGTAGTCGCGTTCCAATGT
GCCCGGTTCAGCGGCAACTCGAAAACATCTGCACCCGGCACAGGTTGGGG
TATTTCGACTGTCTGCGTGGGCTTTAGGTCCGAGGCTGTTCCGAAGTCCA
GGTCGTCGCGGTTCTTGAATAGCTTTAGGGTCTTCGGGGCGGATGGGGAG
GGGGCAGTGTAGATGAGGAGGGAGTGGACTTTGACTTGGCCGGTGAATCT
AGAAGTTAAATGGTTGGTTAGTGGATAATCAGTGCGGTTGTCGTGCAATA
GTATGGTGCATATTGAATCCGTGACATGGAACTTGAGATGAGGGGCATTT
GGCGGGGTAAAAACCATATCACAAACAGCAAATCCGATCGAAACC back to topCoding sequence (CDS) from alignment at ch8:1835655..1837399+ >KJC3_011845-T1 ID=KJC3_011845-T1|Name=KJC3_011845-T1|organism=Aspergillus niger KJC3|type=CDS|length=1872bp|location=Sequence derived from alignment at ch8:1835655..1837399+ (Aspergillus niger KJC3)
ATGGGAAACACAAATAGCACCCACAAGATCTCTGCTCAGGACCGGGCAAT
CCTCGACCTCAAGAACCAGCGAGACAAACTTCACCAGTATCAGAAGCGGA
TTACTGTCTTGACAGACCGCGAAACTGAAATTGCGAAACAATGTCTCGCC
CGGGATGACCGCAAGCGCGCCCTGCTTGCCCTGCGTCGCAAGAAGTACCA
GGAGTCGCTGCTCGACAAGACCGACAAACAACTCGAGCAGCTCGAACAGC
TTACGGGTCAGATTGAGTTTGCACTGGTTCAGAAGGATGTTCTGTTCGGC
TTGCAGCAAGGGACCAAGGTTCTGCAGACCATTAACAAGGAAATGGGTGG
TCTTGAGGGGGTCGAGAAGCTGATGGGCGAGACGGAGGAAGCGAGAGCTT
ATCAAGAGGAAATCAGCGAGATGCTTGCTGGACGCTTGTCCACTCAGGAT
GAGGATGAGGTCGAAGAGGAACTCGAGGCTTTGCAGCGGGATACGCAGGG
TCCGGTTGTCCTGCCAAATGCGCCCAGCTCTACACTCCCAGAGCATGTGG
GGGGAGTCAAGGAGGACGAGCATGCGGTGGAAGAAGAGGCCCACGTCGAG
GAGCGGACGGCGATTCCTGCTTGAATGGGAAACACAAATAGCACCCACAA
GATCTCTGCTCAGGACCGGGCAATCCTCGACCTCAAGAACCAGCGAGACA
AACTTCACCAGTATCAGAAGCGGATTACTGTCTTGACAGACCGCGAAACT
GAAATTGCGAAACAATGTCTCGCCCGGGATGACCGCAAGCGCGCCCTGCT
TGCCCTGCGTCGCAAGAAGTACCAGGAGTCGCTGCTCGACAAGACCGACA
AACAACTCGAGCAGCTCGAACAGCTTACGGGTCAGATTGAGTTTGCACTG
GTTCAGAAGGATGTTCTGTTCGGCTTGCAGCAAGGGACCAAGGTTCTGCA
GACCATTAACAAGGAAATGGGTGGTCTTGAGGGGGTCGAGAAGCTGATGG
GCGAGACGGAGGAAGCGAGAGCTTATCAAGAGGAAATCAGCGAGATGCTT
GCTGGACGCTTGTCCACTCAGGATGAGGATGAGGTCGAAGAGGAACTCGA
GGCTTTGCAGCGGGATACGCAGGGTCCGGTTGTCCTGCCAAATGCGCCCA
GCTCTACACTCCCAGAGCATGTGGGGGGAGTCAAGGAGGACGAGCATGCG
GTGGAAGAAGAGGCCCACGTCGAGGAGCGGACGGCGATTCCTGCTTGAAT
GGGAAACACAAATAGCACCCACAAGATCTCTGCTCAGGACCGGGCAATCC
TCGACCTCAAGAACCAGCGAGACAAACTTCACCAGTATCAGAAGCGGATT
ACTGTCTTGACAGACCGCGAAACTGAAATTGCGAAACAATGTCTCGCCCG
GGATGACCGCAAGCGCGCCCTGCTTGCCCTGCGTCGCAAGAAGTACCAGG
AGTCGCTGCTCGACAAGACCGACAAACAACTCGAGCAGCTCGAACAGCTT
ACGGGTCAGATTGAGTTTGCACTGGTTCAGAAGGATGTTCTGTTCGGCTT
GCAGCAAGGGACCAAGGTTCTGCAGACCATTAACAAGGAAATGGGTGGTC
TTGAGGGGGTCGAGAAGCTGATGGGCGAGACGGAGGAAGCGAGAGCTTAT
CAAGAGGAAATCAGCGAGATGCTTGCTGGACGCTTGTCCACTCAGGATGA
GGATGAGGTCGAAGAGGAACTCGAGGCTTTGCAGCGGGATACGCAGGGTC
CGGTTGTCCTGCCAAATGCGCCCAGCTCTACACTCCCAGAGCATGTGGGG
GGAGTCAAGGAGGACGAGCATGCGGTGGAAGAAGAGGCCCACGTCGAGGA
GCGGACGGCGATTCCTGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011845-T1.utr5p1 | KJC3_011845-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011845-T1.utr3p1 | KJC3_011845-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264IIZ |
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1835655..1837399 + |
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