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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1838051..1840496- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011847-T1 ID=KJC3_011847-T1|Name=KJC3_011847-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2446bp|location=Sequence derived from alignment at ch8:1838051..1840496- (Aspergillus niger KJC3)
GGCTTGCCCAGCCGACCCGGAAATTGCTATAACAATATGTTTCGCTGGGG
TCTTTCAATGTACTCATAGCTTGCCTCTAGTTGGAACACTGGTGCTGCAA
ATCACCTCCTAGTTCCATTCTCACTTAAGGCCCAATCGCAATGGCTTCCG
AGCTGGATCTGTCCACCAGCTTTATCCCGGCTCTATACAAGCCGGCCGCA
TTGCTTCCAATCGCAAGACACAAGCAGAGTTTATTGTACCTGGTTGAGAC
GTATCCGGTGACCATCGTTGTTGGACAAACAGGAAGTGGGAAAACGACCC
AACTACCCCAGTATCTCGACCAAGCAGGGTGGTGTGCAGATGGAAAGGCT
ATAGCAGTGACACAGGTATGCCTTTCCCTTCTGACTGACTCGGATGCAAG
AAGAAAAGCTAATATCGCCCAGCCACGTCGGGTGGCTGCTACCACAGTGG
CAGCTAGGGTAGCTGAGGAAATGCGCTGCAAGCTCGGCGAAGACGTGGGC
TACTCGATTCGTTTTGAGGACTTGACCTCGGCTTCCACCAGGATAAAGTT
CCTTACAGATGGAATGTTGCTTAGGGAGGCACTCGTAGATCCTCTGCTGT
CACGGTACTCTGTTATCATGGTGGATGAAGCTCATGAGCGATCCCTCAGT
ACCGATATCCTCCTAGGTATCCTGAAAAAGATCATGAAACGACGGCCGGA
GCTTAGGATTGTGGTCAGTAGCGCAACCTTGCAAGCAGAAGATTTTCTGC
GATTCTTCGCTGGCGAGGAATTTGACAGCAGTCCGGAATCCGGTGAAATT
GGTGGCAAGGTGGGAAGGATCATCAGTTTGGAAGGTCGCATGTATCCGGT
GGACATGCTCTTTCTCGAGAACCCTGCAGAAGATTATGTCGAGCGCGCAG
TCAAAACCGTGTTCGACATCCATCTTCAAGAGGCGGAAGGCGATATTCTG
GTGTTTTTGACTGGCCGGGAGGAGATTGACACTACGGTGCAGATGATTGC
CGAACGTGCCGCAACACTGCATCCCAAGGCACAGAGTATACTTCCGTTAC
CACTTTACTCTGGTCTAACAACAGATCAGCAAATGTACGTGTTTGAACCG
ACACCAGAGAACACCCGCAAAGTCATCGTGTCGACCAACATCGCCGAAGC
ATCTGTTACTATTAACGGGATTGTGTATGTCATCGACTGCGGCTTCGCCA
AATTAAGAGCTTATAACCCCCAGACCGGCATAGAAACACTGACCGCAGTG
CCCATATCAAAAGCAGCGGCTGTTCAGCGTGCTGGCCGAGCTGGGCGTAC
CAAACCCGGGAAGTGCTTCCGCCTCTACACGCAGCAGGCCTATGAGCAAC
TTCCAGAGGCCACCGTTCCGGAGATTCAGCGGTCAAACCTAGCGCCTGTA
ATCATGCAGCTCAAGGCTTTGGGTATCGACAACATCGTCCGATTCGACTT
TTTGACCTCCCCTCCTACAGAGCTTGTTATTCGCGCATTCGAGCTGCTGT
ACTCTCTGGGGGCAGTTGACGACTATGCCAAACTCACAAAGCCCCATGGG
ATGCGGATGGCAGAGCTGGCAGTCGATCCCATGATGGCAAAGGTGCTGCT
ATCAGCGCCATCTTTTAACTGTCTAAGCGAGATCCTCTCTATTGCCGCCA
TGGTGAGTCTTCAAGGGACCGTATGGGTCCAGCATGAAGGCGACAGAAAG
TCATCGGAGAGCCACCGCAGAAAGTTCGCAGTCGAAGAGGGTGATCATTT
AACGTATCTTAACGTGTATCAAGCGTTCATCACCAAAGGAAAGAAGGACT
CCAAGTGGTGTCGGGACAATCTCCTAAACTTTCGATCTTTGCAACGGGCT
GTGAGCATTCGCGCCCAGTTGAAGCGATATCTGGAGCGCTTTGGAATCCA
AGTCGATGAGACTCTCTCTGCAAGGTCTCGGCAAGAAGACCCAAGTAAGC
TTGCGGAACAGATTCGTAGGTGCCTTACTACGGGCTATTTCGCACACGCT
GCGAAGATGCAGCCCGATGGCACCTTTAAGACGGTGAGCGGAGGCCTGAC
TCTCCATGCTCACCCGAGTTCATTGATGTTTGTATGTTGGCAATCTAGGA
TTTGTAGTATCTTTGCGATCATTTGCTAATTGGACTGTATAGAATCGGAA
AGCCGACTGGGTCATCTTCCATGAGATCTTACAGACCGGCGAGAAGACCT
TCATCCGCGATGTGACTAAAATCGAGAAGAATTACCTCCTCGAATATGCC
CCAAACTATTACCAGGTTTATTAAGCTCTAGGAGATAGAGAGTATCTTGA
TGGGATCCATTTGATGGCGAATCCACTAGCGATTCTTATTGACGACATGC
ACTGCCTGTACTATACCCGCCAGCGTTGACCTCTATAGAATGATAGAGAT
CCAGATTCTTTCTTTCTGCTTTAGTCATAAATATAATATATACCAG back to topCoding sequence (CDS) from alignment at ch8:1838051..1840496- >KJC3_011847-T1 ID=KJC3_011847-T1|Name=KJC3_011847-T1|organism=Aspergillus niger KJC3|type=CDS|length=6048bp|location=Sequence derived from alignment at ch8:1838051..1840496- (Aspergillus niger KJC3)
AATCGGAAAGCCGACTGGGTCATCTTCCATGAGATCTTACAGACCGGCGA
GAAGACCTTCATCCGCGATGTGACTAAAATCGAGAAGAATTACCTCCTCG
AATATGCCCCAAACTATTACCAGGTTTATTAACCACGTCGGGTGGCTGCT
ACCACAGTGGCAGCTAGGGTAGCTGAGGAAATGCGCTGCAAGCTCGGCGA
AGACGTGGGCTACTCGATTCGTTTTGAGGACTTGACCTCGGCTTCCACCA
GGATAAAGTTCCTTACAGATGGAATGTTGCTTAGGGAGGCACTCGTAGAT
CCTCTGCTGTCACGGTACTCTGTTATCATGGTGGATGAAGCTCATGAGCG
ATCCCTCAGTACCGATATCCTCCTAGGTATCCTGAAAAAGATCATGAAAC
GACGGCCGGAGCTTAGGATTGTGGTCAGTAGCGCAACCTTGCAAGCAGAA
GATTTTCTGCGATTCTTCGCTGGCGAGGAATTTGACAGCAGTCCGGAATC
CGGTGAAATTGGTGGCAAGGTGGGAAGGATCATCAGTTTGGAAGGTCGCA
TGTATCCGGTGGACATGCTCTTTCTCGAGAACCCTGCAGAAGATTATGTC
GAGCGCGCAGTCAAAACCGTGTTCGACATCCATCTTCAAGAGGCGGAAGG
CGATATTCTGGTGTTTTTGACTGGCCGGGAGGAGATTGACACTACGGTGC
AGATGATTGCCGAACGTGCCGCAACACTGCATCCCAAGGCACAGAGTATA
CTTCCGTTACCACTTTACTCTGGTCTAACAACAGATCAGCAAATGTACGT
GTTTGAACCGACACCAGAGAACACCCGCAAAGTCATCGTGTCGACCAACA
TCGCCGAAGCATCTGTTACTATTAACGGGATTGTGTATGTCATCGACTGC
GGCTTCGCCAAATTAAGAGCTTATAACCCCCAGACCGGCATAGAAACACT
GACCGCAGTGCCCATATCAAAAGCAGCGGCTGTTCAGCGTGCTGGCCGAG
CTGGGCGTACCAAACCCGGGAAGTGCTTCCGCCTCTACACGCAGCAGGCC
TATGAGCAACTTCCAGAGGCCACCGTTCCGGAGATTCAGCGGTCAAACCT
AGCGCCTGTAATCATGCAGCTCAAGGCTTTGGGTATCGACAACATCGTCC
GATTCGACTTTTTGACCTCCCCTCCTACAGAGCTTGTTATTCGCGCATTC
GAGCTGCTGTACTCTCTGGGGGCAGTTGACGACTATGCCAAACTCACAAA
GCCCCATGGGATGCGGATGGCAGAGCTGGCAGTCGATCCCATGATGGCAA
AGGTGCTGCTATCAGCGCCATCTTTTAACTGTCTAAGCGAGATCCTCTCT
ATTGCCGCCATGGTGAGTCTTCAAGGGACCGTATGGGTCCAGCATGAAGG
CGACAGAAAGTCATCGGAGAGCCACCGCAGAAAGTTCGCAGTCGAAGAGG
GTGATCATTTAACGTATCTTAACGTGTATCAAGCGTTCATCACCAAAGGA
AAGAAGGACTCCAAGTGGTGTCGGGACAATCTCCTAAACTTTCGATCTTT
GCAACGGGCTGTGAGCATTCGCGCCCAGTTGAAGCGATATCTGGAGCGCT
TTGGAATCCAAGTCGATGAGACTCTCTCTGCAAGGTCTCGGCAAGAAGAC
CCAAGTAAGCTTGCGGAACAGATTCGTAGGTGCCTTACTACGGGCTATTT
CGCACACGCTGCGAAGATGCAGCCCGATGGCACCTTTAAGACGGTGAGCG
GAGGCCTGACTCTCCATGCTCACCCGAGTTCATTGATGTTTATGGCTTCC
GAGCTGGATCTGTCCACCAGCTTTATCCCGGCTCTATACAAGCCGGCCGC
ATTGCTTCCAATCGCAAGACACAAGCAGAGTTTATTGTACCTGGTTGAGA
CGTATCCGGTGACCATCGTTGTTGGACAAACAGGAAGTGGGAAAACGACC
CAACTACCCCAGTATCTCGACCAAGCAGGGTGGTGTGCAGATGGAAAGGC
TATAGCAGTGACACAGAATCGGAAAGCCGACTGGGTCATCTTCCATGAGA
TCTTACAGACCGGCGAGAAGACCTTCATCCGCGATGTGACTAAAATCGAG
AAGAATTACCTCCTCGAATATGCCCCAAACTATTACCAGGTTTATTAACC
ACGTCGGGTGGCTGCTACCACAGTGGCAGCTAGGGTAGCTGAGGAAATGC
GCTGCAAGCTCGGCGAAGACGTGGGCTACTCGATTCGTTTTGAGGACTTG
ACCTCGGCTTCCACCAGGATAAAGTTCCTTACAGATGGAATGTTGCTTAG
GGAGGCACTCGTAGATCCTCTGCTGTCACGGTACTCTGTTATCATGGTGG
ATGAAGCTCATGAGCGATCCCTCAGTACCGATATCCTCCTAGGTATCCTG
AAAAAGATCATGAAACGACGGCCGGAGCTTAGGATTGTGGTCAGTAGCGC
AACCTTGCAAGCAGAAGATTTTCTGCGATTCTTCGCTGGCGAGGAATTTG
ACAGCAGTCCGGAATCCGGTGAAATTGGTGGCAAGGTGGGAAGGATCATC
AGTTTGGAAGGTCGCATGTATCCGGTGGACATGCTCTTTCTCGAGAACCC
TGCAGAAGATTATGTCGAGCGCGCAGTCAAAACCGTGTTCGACATCCATC
TTCAAGAGGCGGAAGGCGATATTCTGGTGTTTTTGACTGGCCGGGAGGAG
ATTGACACTACGGTGCAGATGATTGCCGAACGTGCCGCAACACTGCATCC
CAAGGCACAGAGTATACTTCCGTTACCACTTTACTCTGGTCTAACAACAG
ATCAGCAAATGTACGTGTTTGAACCGACACCAGAGAACACCCGCAAAGTC
ATCGTGTCGACCAACATCGCCGAAGCATCTGTTACTATTAACGGGATTGT
GTATGTCATCGACTGCGGCTTCGCCAAATTAAGAGCTTATAACCCCCAGA
CCGGCATAGAAACACTGACCGCAGTGCCCATATCAAAAGCAGCGGCTGTT
CAGCGTGCTGGCCGAGCTGGGCGTACCAAACCCGGGAAGTGCTTCCGCCT
CTACACGCAGCAGGCCTATGAGCAACTTCCAGAGGCCACCGTTCCGGAGA
TTCAGCGGTCAAACCTAGCGCCTGTAATCATGCAGCTCAAGGCTTTGGGT
ATCGACAACATCGTCCGATTCGACTTTTTGACCTCCCCTCCTACAGAGCT
TGTTATTCGCGCATTCGAGCTGCTGTACTCTCTGGGGGCAGTTGACGACT
ATGCCAAACTCACAAAGCCCCATGGGATGCGGATGGCAGAGCTGGCAGTC
GATCCCATGATGGCAAAGGTGCTGCTATCAGCGCCATCTTTTAACTGTCT
AAGCGAGATCCTCTCTATTGCCGCCATGGTGAGTCTTCAAGGGACCGTAT
GGGTCCAGCATGAAGGCGACAGAAAGTCATCGGAGAGCCACCGCAGAAAG
TTCGCAGTCGAAGAGGGTGATCATTTAACGTATCTTAACGTGTATCAAGC
GTTCATCACCAAAGGAAAGAAGGACTCCAAGTGGTGTCGGGACAATCTCC
TAAACTTTCGATCTTTGCAACGGGCTGTGAGCATTCGCGCCCAGTTGAAG
CGATATCTGGAGCGCTTTGGAATCCAAGTCGATGAGACTCTCTCTGCAAG
GTCTCGGCAAGAAGACCCAAGTAAGCTTGCGGAACAGATTCGTAGGTGCC
TTACTACGGGCTATTTCGCACACGCTGCGAAGATGCAGCCCGATGGCACC
TTTAAGACGGTGAGCGGAGGCCTGACTCTCCATGCTCACCCGAGTTCATT
GATGTTTATGGCTTCCGAGCTGGATCTGTCCACCAGCTTTATCCCGGCTC
TATACAAGCCGGCCGCATTGCTTCCAATCGCAAGACACAAGCAGAGTTTA
TTGTACCTGGTTGAGACGTATCCGGTGACCATCGTTGTTGGACAAACAGG
AAGTGGGAAAACGACCCAACTACCCCAGTATCTCGACCAAGCAGGGTGGT
GTGCAGATGGAAAGGCTATAGCAGTGACACAGAATCGGAAAGCCGACTGG
GTCATCTTCCATGAGATCTTACAGACCGGCGAGAAGACCTTCATCCGCGA
TGTGACTAAAATCGAGAAGAATTACCTCCTCGAATATGCCCCAAACTATT
ACCAGGTTTATTAACCACGTCGGGTGGCTGCTACCACAGTGGCAGCTAGG
GTAGCTGAGGAAATGCGCTGCAAGCTCGGCGAAGACGTGGGCTACTCGAT
TCGTTTTGAGGACTTGACCTCGGCTTCCACCAGGATAAAGTTCCTTACAG
ATGGAATGTTGCTTAGGGAGGCACTCGTAGATCCTCTGCTGTCACGGTAC
TCTGTTATCATGGTGGATGAAGCTCATGAGCGATCCCTCAGTACCGATAT
CCTCCTAGGTATCCTGAAAAAGATCATGAAACGACGGCCGGAGCTTAGGA
TTGTGGTCAGTAGCGCAACCTTGCAAGCAGAAGATTTTCTGCGATTCTTC
GCTGGCGAGGAATTTGACAGCAGTCCGGAATCCGGTGAAATTGGTGGCAA
GGTGGGAAGGATCATCAGTTTGGAAGGTCGCATGTATCCGGTGGACATGC
TCTTTCTCGAGAACCCTGCAGAAGATTATGTCGAGCGCGCAGTCAAAACC
GTGTTCGACATCCATCTTCAAGAGGCGGAAGGCGATATTCTGGTGTTTTT
GACTGGCCGGGAGGAGATTGACACTACGGTGCAGATGATTGCCGAACGTG
CCGCAACACTGCATCCCAAGGCACAGAGTATACTTCCGTTACCACTTTAC
TCTGGTCTAACAACAGATCAGCAAATGTACGTGTTTGAACCGACACCAGA
GAACACCCGCAAAGTCATCGTGTCGACCAACATCGCCGAAGCATCTGTTA
CTATTAACGGGATTGTGTATGTCATCGACTGCGGCTTCGCCAAATTAAGA
GCTTATAACCCCCAGACCGGCATAGAAACACTGACCGCAGTGCCCATATC
AAAAGCAGCGGCTGTTCAGCGTGCTGGCCGAGCTGGGCGTACCAAACCCG
GGAAGTGCTTCCGCCTCTACACGCAGCAGGCCTATGAGCAACTTCCAGAG
GCCACCGTTCCGGAGATTCAGCGGTCAAACCTAGCGCCTGTAATCATGCA
GCTCAAGGCTTTGGGTATCGACAACATCGTCCGATTCGACTTTTTGACCT
CCCCTCCTACAGAGCTTGTTATTCGCGCATTCGAGCTGCTGTACTCTCTG
GGGGCAGTTGACGACTATGCCAAACTCACAAAGCCCCATGGGATGCGGAT
GGCAGAGCTGGCAGTCGATCCCATGATGGCAAAGGTGCTGCTATCAGCGC
CATCTTTTAACTGTCTAAGCGAGATCCTCTCTATTGCCGCCATGGTGAGT
CTTCAAGGGACCGTATGGGTCCAGCATGAAGGCGACAGAAAGTCATCGGA
GAGCCACCGCAGAAAGTTCGCAGTCGAAGAGGGTGATCATTTAACGTATC
TTAACGTGTATCAAGCGTTCATCACCAAAGGAAAGAAGGACTCCAAGTGG
TGTCGGGACAATCTCCTAAACTTTCGATCTTTGCAACGGGCTGTGAGCAT
TCGCGCCCAGTTGAAGCGATATCTGGAGCGCTTTGGAATCCAAGTCGATG
AGACTCTCTCTGCAAGGTCTCGGCAAGAAGACCCAAGTAAGCTTGCGGAA
CAGATTCGTAGGTGCCTTACTACGGGCTATTTCGCACACGCTGCGAAGAT
GCAGCCCGATGGCACCTTTAAGACGGTGAGCGGAGGCCTGACTCTCCATG
CTCACCCGAGTTCATTGATGTTTATGGCTTCCGAGCTGGATCTGTCCACC
AGCTTTATCCCGGCTCTATACAAGCCGGCCGCATTGCTTCCAATCGCAAG
ACACAAGCAGAGTTTATTGTACCTGGTTGAGACGTATCCGGTGACCATCG
TTGTTGGACAAACAGGAAGTGGGAAAACGACCCAACTACCCCAGTATCTC
GACCAAGCAGGGTGGTGTGCAGATGGAAAGGCTATAGCAGTGACACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004386 | helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011847-T1.utr3p1 | KJC3_011847-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011847-T1.utr5p1 | KJC3_011847-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR002464 |
| DBxref | InterPro:IPR011709 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR007502 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF07717 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF04408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1838051..1840496 - |
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