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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1842544..1843352- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011849-T1 ID=KJC3_011849-T1|Name=KJC3_011849-T1|organism=Aspergillus niger KJC3|type=mRNA|length=809bp|location=Sequence derived from alignment at ch8:1842544..1843352- (Aspergillus niger KJC3)
CTACCATCTGTGTTTTCAGTTCTATCTATAGCTTATACTCTACACACAAA
TACACTTTCCAGCATTCTATCTAGCGTTTCATCCTCTGTTCTTTTCTCTC
ACCTCTCTCTGACCATTCAAACATTCAATCAAAGACTTGACTCTCCCTCC
CCGAAAATGCCCTCCCAAGCCGACGACAAACGCCAGGCCGCCCGCGAAGT
TATTGACATTCTTCACGAGATTTCCACCCTTCTTGTACGTGACAATCCCC
TCCTCCCCCGAGTTTCCTTTCATTCTTGTACCTGGCTTTTCTTTCTTTTG
TTCTTCTATTATTGTTGTATTTTCACAAGCTTTTGCTTTCATCTACTGCG
ACCATCTTCATCTTACCTACCACCAACATGCCACACAGGATTAGACCTCC
TGGGATCTAGTCGTGTCTGGTCTAGTCTGGTTCTCTGGTGTCATATCATC
TGACAAGACACATACACACTTGGTCAACGAACTGACCGGGCTGATTAACT
AACTATATTCAACCCCTCTAGAACACTAATTTAGACCGCACGGAGCTGTC
GCTTTGTGTGTCCTTGATTGAGAATGGGGTCAATCCGGATGCTCTCGCTG
TGAGTTCTTGCTCATCTATCATGTGCTATGCCTTTACTTTGTTCCGGGAG
GTTCTGGAAGCTGACGCTGTCTATCAGGCGGTCATTAAGGATCTAAGAAA
AGAAGCTGGTGCGTCGCGCGGGTTCGCGACTGAGCAGCAGCAGGGTTTGC
CGGAGTGAATTCTTTTTGGGGGTTGAGGTTGTGTGTTTAGTGCTCTAGGT
ATCTATGGC back to topCoding sequence (CDS) from alignment at ch8:1842544..1843352- >KJC3_011849-T1 ID=KJC3_011849-T1|Name=KJC3_011849-T1|organism=Aspergillus niger KJC3|type=CDS|length=711bp|location=Sequence derived from alignment at ch8:1842544..1843352- (Aspergillus niger KJC3)
GCGGTCATTAAGGATCTAAGAAAAGAAGCTGGTGCGTCGCGCGGGTTCGC
GACTGAGCAGCAGCAGGGTTTGCCGGAGTGAAACACTAATTTAGACCGCA
CGGAGCTGTCGCTTTGTGTGTCCTTGATTGAGAATGGGGTCAATCCGGAT
GCTCTCGCTATGCCCTCCCAAGCCGACGACAAACGCCAGGCCGCCCGCGA
AGTTATTGACATTCTTCACGAGATTTCCACCCTTCTTGCGGTCATTAAGG
ATCTAAGAAAAGAAGCTGGTGCGTCGCGCGGGTTCGCGACTGAGCAGCAG
CAGGGTTTGCCGGAGTGAAACACTAATTTAGACCGCACGGAGCTGTCGCT
TTGTGTGTCCTTGATTGAGAATGGGGTCAATCCGGATGCTCTCGCTATGC
CCTCCCAAGCCGACGACAAACGCCAGGCCGCCCGCGAAGTTATTGACATT
CTTCACGAGATTTCCACCCTTCTTGCGGTCATTAAGGATCTAAGAAAAGA
AGCTGGTGCGTCGCGCGGGTTCGCGACTGAGCAGCAGCAGGGTTTGCCGG
AGTGAAACACTAATTTAGACCGCACGGAGCTGTCGCTTTGTGTGTCCTTG
ATTGAGAATGGGGTCAATCCGGATGCTCTCGCTATGCCCTCCCAAGCCGA
CGACAAACGCCAGGCCGCCCGCGAAGTTATTGACATTCTTCACGAGATTT
CCACCCTTCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0008274 | gamma-tubulin ring complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0033566 | gamma-tubulin complex localization |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011849-T1.utr3p1 | KJC3_011849-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011849-T1.utr5p1 | KJC3_011849-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022214 |
| DBxref | PFAM:PF12554 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1842544..1843352 - |
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