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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1848103..1850335+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011852-T1 ID=KJC3_011852-T1|Name=KJC3_011852-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2233bp|location=Sequence derived from alignment at ch8:1848103..1850335+ (Aspergillus niger KJC3)
GAACGAGGCTTATCAAAGCCCATTCTCATCGTCATCTCTCAGGCGGAGGG
GGTTCTTATTTCTTCCCTCAGCCTCTTGGCCCTTTGAGTTTGGGGCATTC
CTATTCAACTCAAGCCTAGGATTCCTTCATCATGACCATTGCTTCTGATC
AACCAGAGACACCTTCTGAAACAACTTCTCTTTTATCTGGGCACAATGAA
TCCCCTGTACAGCCAAAAAGTGTTACGCGTAGAGCCCAGCGGGTCTTATT
CCTTGCGTGCCTCATAGCAGTCACTGTCGATATCGGCAACTACATCTCCG
TTGCTCCCCAACTTCAGATATACGAGTTGAACATCTGCCAGCGCTTGCAT
CCGGAGGTCTTTGATAGCACCCCCGGAAGGGGTCTCCCTTCAGTATCTCC
TTCGGCTTGTAAGGCTGCTGATGTGCAGGGTGAGCTAGCATTGCTCAAAG
GTTGGATGAGCACCTTTGACCAGCTTCCAAGCATTGTTCTGGCACTTCCA
TATGGACTCATGGCAGACCGCGTTGGTCGTATACCAGTCCTATTTCTGAG
CCTGGCTGGGGCTGTCTTGGAGGAGATGGCGATCAGAGTTATCGGTAAGT
AAAGCTTGCCTTGCGATGTGAAGGGACAGGCTAACTCCGATATAAAAGCC
TGGTATCATGCGACCATCCCACCACGAGCAATTTGGTTTACACCAATATT
TCAGATTCTTGGTGGTGGTTCTCAGATAACTACCTCCGTGGCTTTCACCA
TCATCGCGGATGTTTTTCCTATAGAGAAACGGTACTAAAATCTGGCCAAT
CCTGTTCACAGTCCCTTCACTAATCAAGGGCCCCTTCCAGTTCGAATGCC
TATTTCATCTTGTCGGCAAGTATACTACTGTCAGAAATTGTTGCTGTTCC
CTTAAGTGCCTGGATGATGTCATCGAACGCCTGGATACCTTGGATGCTGG
GACTAGCCTGCGAGATCAGTAGCTTGTTTGCAATCCTCTGGTTGCCGGAG
ACTAAACCAGCGCCCTCAATAAACACCGTCAATGATGTCCAGCCGGAGAC
GGCAGGCCACTCAAAGCGATCATCGGCATTCACATGGGCAAGTGTAGTAC
ACTTTGCCCGCTCACAGATCGCTCAGCTGCACGAGTTCATCTGCGAGTAT
CCAAGTGCCCTGGTCATCTCCATCGCATTCTTCTTTTCGAGCTATGGAAT
CGAAGCAGTTCCTTTCATGCTCCAATATGTCTCCAAACGCTTTTCATGGA
GCTTAGCAGAGGTATGATATCTTGGCAAAATGTGCAAGTACTTCAAGTCT
TTTGGTGTGCTGATATGATTTCCAAGGCGAGCCTTCTTATATGCGTTAAG
GGGATAATCAATTGCTTCGCTTTGATGCTCGTCCTTCCGATAGCTACGAA
GATCCTCGACCGATATTTGTCACCCGTGCAGAGAGACATCAGAATGGCGC
TAGGCTGCGCATGTCTGTTGATGGCTGCTTTTGTCTTCATGTGCGTGGCA
TCTCATCCAGCAGTGTTCGTTGTAGGAGTTGCTCTGGTTGCTTTTGGAGG
GGGGTTCTACGCCGCTCTGCGCAGCGTCGGGAGTGCTTTGGTTGGGCCAT
CGCATGTGGGACTCCTTAATACGACCATAACGCTGACACAGGGAGCTGGA
CTCATGATATCTGGGCCACTCCTAGCTGGATTGTTTCGAGCAGGGATGGC
CTGGGAAGGGGTGTGGATGGGGCTGCCATGGATGGCAGGAGTTATCCTGT
TTGCAGCAACCATTCTGACGGTGTATTGTCTCCAAGTCCAGGGCTAGGTC
TAGCCATCAGCCCCTGGCTGTCGATGACAGTTAGTGCCACGTCAGCTGCA
TTTTATGGGGAACAAGTGATCAAGGTTGATCATATAAGAGCATGACAACA
GGCCTGAATGTCCTCAGAGAGAGAGAGAACAAGCGGAGATACTCAGGGCA
GCGACAGCGACAGCGGCAGATGGACTTACTGGCAGTAGTGGTATAGGCTC
TTCTAGTGGATAGAAGAGACAACATGGACACCAGTCCGGAGTGAGACGTG
ACAATTTCAGAGTTGAACCTCCAGGTGAGATAGTATCAATCCGCAATGGC
CTTGCTACTGGAATCTTCCAAGGAGCGGTCTGGGGAAGAGACTTCACTAG
GAAAGCAGTGAAAGTATGGAGTAGTAACTTAGTTAAGAGGCAGAGCAGGT
GCGACTCTACTAGACTAAAGAAAATCGTCCTGC back to topCoding sequence (CDS) from alignment at ch8:1848103..1850335+ >KJC3_011852-T1 ID=KJC3_011852-T1|Name=KJC3_011852-T1|organism=Aspergillus niger KJC3|type=CDS|length=5952bp|location=Sequence derived from alignment at ch8:1848103..1850335+ (Aspergillus niger KJC3)
ATGACCATTGCTTCTGATCAACCAGAGACACCTTCTGAAACAACTTCTCT
TTTATCTGGGCACAATGAATCCCCTGTACAGCCAAAAAGTGTTACGCGTA
GAGCCCAGCGGGTCTTATTCCTTGCGTGCCTCATAGCAGTCACTGTCGAT
ATCGGCAACTACATCTCCGTTGCTCCCCAACTTCAGATATACGAGTTGAA
CATCTGCCAGCGCTTGCATCCGGAGGTCTTTGATAGCACCCCCGGAAGGG
GTCTCCCTTCAGTATCTCCTTCGGCTTGTAAGGCTGCTGATGTGCAGGGT
GAGCTAGCATTGCTCAAAGGTTGGATGAGCACCTTTGACCAGCTTCCAAG
CATTGTTCTGGCACTTCCATATGGACTCATGGCAGACCGCGTTGGTCGTA
TACCAGTCCTATTTCTGAGCCTGGCTGGGGCTGTCTTGGAGGAGATGGCG
ATCAGAGTTATCGCCTGGTATCATGCGACCATCCCACCACGAGCAATTTG
GTTTACACCAATATTTCAGATTCTTGGTGGTGGTTCTCAGATAACTACCT
CCGTGGCTTTCACCATCATCGCGGATGTTTTTCCTATAGAGAAACGTTCG
AATGCCTATTTCATCTTGTCGGCAAGTATACTACTGTCAGAAATTGTTGC
TGTTCCCTTAAGTGCCTGGATGATGTCATCGAACGCCTGGATACCTTGGA
TGCTGGGACTAGCCTGCGAGATCAGTAGCTTGTTTGCAATCCTCTGGTTG
CCGGAGACTAAACCAGCGCCCTCAATAAACACCGTCAATGATGTCCAGCC
GGAGACGGCAGGCCACTCAAAGCGATCATCGGCATTCACATGGGCAAGTG
TAGTACACTTTGCCCGCTCACAGATCGCTCAGCTGCACGAGTTCATCTGC
GAGTATCCAAGTGCCCTGGTCATCTCCATCGCATTCTTCTTTTCGAGCTA
TGGAATCGAAGCAGTTCCTTTCATGCTCCAATATGTCTCCAAACGCTTTT
CATGGAGCTTAGCAGAGGCGAGCCTTCTTATATGCGTTAAGGGGATAATC
AATTGCTTCGCTTTGATGCTCGTCCTTCCGATAGCTACGAAGATCCTCGA
CCGATATTTGTCACCCGTGCAGAGAGACATCAGAATGGCGCTAGGCTGCG
CATGTCTGTTGATGGCTGCTTTTGTCTTCATGTGCGTGGCATCTCATCCA
GCAGTGTTCGTTGTAGGAGTTGCTCTGGTTGCTTTTGGAGGGGGGTTCTA
CGCCGCTCTGCGCAGCGTCGGGAGTGCTTTGGTTGGGCCATCGCATGTGG
GACTCCTTAATACGACCATAACGCTGACACAGGGAGCTGGACTCATGATA
TCTGGGCCACTCCTAGCTGGATTGTTTCGAGCAGGGATGGCCTGGGAAGG
GGTGTGGATGGGGCTGCCATGGATGGCAGGAGTTATCCTGTTTGCAGCAA
CCATTCTGACGGTGTATTGTCTCCAAGTCCAGGGCTAGATGACCATTGCT
TCTGATCAACCAGAGACACCTTCTGAAACAACTTCTCTTTTATCTGGGCA
CAATGAATCCCCTGTACAGCCAAAAAGTGTTACGCGTAGAGCCCAGCGGG
TCTTATTCCTTGCGTGCCTCATAGCAGTCACTGTCGATATCGGCAACTAC
ATCTCCGTTGCTCCCCAACTTCAGATATACGAGTTGAACATCTGCCAGCG
CTTGCATCCGGAGGTCTTTGATAGCACCCCCGGAAGGGGTCTCCCTTCAG
TATCTCCTTCGGCTTGTAAGGCTGCTGATGTGCAGGGTGAGCTAGCATTG
CTCAAAGGTTGGATGAGCACCTTTGACCAGCTTCCAAGCATTGTTCTGGC
ACTTCCATATGGACTCATGGCAGACCGCGTTGGTCGTATACCAGTCCTAT
TTCTGAGCCTGGCTGGGGCTGTCTTGGAGGAGATGGCGATCAGAGTTATC
GCCTGGTATCATGCGACCATCCCACCACGAGCAATTTGGTTTACACCAAT
ATTTCAGATTCTTGGTGGTGGTTCTCAGATAACTACCTCCGTGGCTTTCA
CCATCATCGCGGATGTTTTTCCTATAGAGAAACGTTCGAATGCCTATTTC
ATCTTGTCGGCAAGTATACTACTGTCAGAAATTGTTGCTGTTCCCTTAAG
TGCCTGGATGATGTCATCGAACGCCTGGATACCTTGGATGCTGGGACTAG
CCTGCGAGATCAGTAGCTTGTTTGCAATCCTCTGGTTGCCGGAGACTAAA
CCAGCGCCCTCAATAAACACCGTCAATGATGTCCAGCCGGAGACGGCAGG
CCACTCAAAGCGATCATCGGCATTCACATGGGCAAGTGTAGTACACTTTG
CCCGCTCACAGATCGCTCAGCTGCACGAGTTCATCTGCGAGTATCCAAGT
GCCCTGGTCATCTCCATCGCATTCTTCTTTTCGAGCTATGGAATCGAAGC
AGTTCCTTTCATGCTCCAATATGTCTCCAAACGCTTTTCATGGAGCTTAG
CAGAGGCGAGCCTTCTTATATGCGTTAAGGGGATAATCAATTGCTTCGCT
TTGATGCTCGTCCTTCCGATAGCTACGAAGATCCTCGACCGATATTTGTC
ACCCGTGCAGAGAGACATCAGAATGGCGCTAGGCTGCGCATGTCTGTTGA
TGGCTGCTTTTGTCTTCATGTGCGTGGCATCTCATCCAGCAGTGTTCGTT
GTAGGAGTTGCTCTGGTTGCTTTTGGAGGGGGGTTCTACGCCGCTCTGCG
CAGCGTCGGGAGTGCTTTGGTTGGGCCATCGCATGTGGGACTCCTTAATA
CGACCATAACGCTGACACAGGGAGCTGGACTCATGATATCTGGGCCACTC
CTAGCTGGATTGTTTCGAGCAGGGATGGCCTGGGAAGGGGTGTGGATGGG
GCTGCCATGGATGGCAGGAGTTATCCTGTTTGCAGCAACCATTCTGACGG
TGTATTGTCTCCAAGTCCAGGGCTAGATGACCATTGCTTCTGATCAACCA
GAGACACCTTCTGAAACAACTTCTCTTTTATCTGGGCACAATGAATCCCC
TGTACAGCCAAAAAGTGTTACGCGTAGAGCCCAGCGGGTCTTATTCCTTG
CGTGCCTCATAGCAGTCACTGTCGATATCGGCAACTACATCTCCGTTGCT
CCCCAACTTCAGATATACGAGTTGAACATCTGCCAGCGCTTGCATCCGGA
GGTCTTTGATAGCACCCCCGGAAGGGGTCTCCCTTCAGTATCTCCTTCGG
CTTGTAAGGCTGCTGATGTGCAGGGTGAGCTAGCATTGCTCAAAGGTTGG
ATGAGCACCTTTGACCAGCTTCCAAGCATTGTTCTGGCACTTCCATATGG
ACTCATGGCAGACCGCGTTGGTCGTATACCAGTCCTATTTCTGAGCCTGG
CTGGGGCTGTCTTGGAGGAGATGGCGATCAGAGTTATCGCCTGGTATCAT
GCGACCATCCCACCACGAGCAATTTGGTTTACACCAATATTTCAGATTCT
TGGTGGTGGTTCTCAGATAACTACCTCCGTGGCTTTCACCATCATCGCGG
ATGTTTTTCCTATAGAGAAACGTTCGAATGCCTATTTCATCTTGTCGGCA
AGTATACTACTGTCAGAAATTGTTGCTGTTCCCTTAAGTGCCTGGATGAT
GTCATCGAACGCCTGGATACCTTGGATGCTGGGACTAGCCTGCGAGATCA
GTAGCTTGTTTGCAATCCTCTGGTTGCCGGAGACTAAACCAGCGCCCTCA
ATAAACACCGTCAATGATGTCCAGCCGGAGACGGCAGGCCACTCAAAGCG
ATCATCGGCATTCACATGGGCAAGTGTAGTACACTTTGCCCGCTCACAGA
TCGCTCAGCTGCACGAGTTCATCTGCGAGTATCCAAGTGCCCTGGTCATC
TCCATCGCATTCTTCTTTTCGAGCTATGGAATCGAAGCAGTTCCTTTCAT
GCTCCAATATGTCTCCAAACGCTTTTCATGGAGCTTAGCAGAGGCGAGCC
TTCTTATATGCGTTAAGGGGATAATCAATTGCTTCGCTTTGATGCTCGTC
CTTCCGATAGCTACGAAGATCCTCGACCGATATTTGTCACCCGTGCAGAG
AGACATCAGAATGGCGCTAGGCTGCGCATGTCTGTTGATGGCTGCTTTTG
TCTTCATGTGCGTGGCATCTCATCCAGCAGTGTTCGTTGTAGGAGTTGCT
CTGGTTGCTTTTGGAGGGGGGTTCTACGCCGCTCTGCGCAGCGTCGGGAG
TGCTTTGGTTGGGCCATCGCATGTGGGACTCCTTAATACGACCATAACGC
TGACACAGGGAGCTGGACTCATGATATCTGGGCCACTCCTAGCTGGATTG
TTTCGAGCAGGGATGGCCTGGGAAGGGGTGTGGATGGGGCTGCCATGGAT
GGCAGGAGTTATCCTGTTTGCAGCAACCATTCTGACGGTGTATTGTCTCC
AAGTCCAGGGCTAGATGACCATTGCTTCTGATCAACCAGAGACACCTTCT
GAAACAACTTCTCTTTTATCTGGGCACAATGAATCCCCTGTACAGCCAAA
AAGTGTTACGCGTAGAGCCCAGCGGGTCTTATTCCTTGCGTGCCTCATAG
CAGTCACTGTCGATATCGGCAACTACATCTCCGTTGCTCCCCAACTTCAG
ATATACGAGTTGAACATCTGCCAGCGCTTGCATCCGGAGGTCTTTGATAG
CACCCCCGGAAGGGGTCTCCCTTCAGTATCTCCTTCGGCTTGTAAGGCTG
CTGATGTGCAGGGTGAGCTAGCATTGCTCAAAGGTTGGATGAGCACCTTT
GACCAGCTTCCAAGCATTGTTCTGGCACTTCCATATGGACTCATGGCAGA
CCGCGTTGGTCGTATACCAGTCCTATTTCTGAGCCTGGCTGGGGCTGTCT
TGGAGGAGATGGCGATCAGAGTTATCGCCTGGTATCATGCGACCATCCCA
CCACGAGCAATTTGGTTTACACCAATATTTCAGATTCTTGGTGGTGGTTC
TCAGATAACTACCTCCGTGGCTTTCACCATCATCGCGGATGTTTTTCCTA
TAGAGAAACGTTCGAATGCCTATTTCATCTTGTCGGCAAGTATACTACTG
TCAGAAATTGTTGCTGTTCCCTTAAGTGCCTGGATGATGTCATCGAACGC
CTGGATACCTTGGATGCTGGGACTAGCCTGCGAGATCAGTAGCTTGTTTG
CAATCCTCTGGTTGCCGGAGACTAAACCAGCGCCCTCAATAAACACCGTC
AATGATGTCCAGCCGGAGACGGCAGGCCACTCAAAGCGATCATCGGCATT
CACATGGGCAAGTGTAGTACACTTTGCCCGCTCACAGATCGCTCAGCTGC
ACGAGTTCATCTGCGAGTATCCAAGTGCCCTGGTCATCTCCATCGCATTC
TTCTTTTCGAGCTATGGAATCGAAGCAGTTCCTTTCATGCTCCAATATGT
CTCCAAACGCTTTTCATGGAGCTTAGCAGAGGCGAGCCTTCTTATATGCG
TTAAGGGGATAATCAATTGCTTCGCTTTGATGCTCGTCCTTCCGATAGCT
ACGAAGATCCTCGACCGATATTTGTCACCCGTGCAGAGAGACATCAGAAT
GGCGCTAGGCTGCGCATGTCTGTTGATGGCTGCTTTTGTCTTCATGTGCG
TGGCATCTCATCCAGCAGTGTTCGTTGTAGGAGTTGCTCTGGTTGCTTTT
GGAGGGGGGTTCTACGCCGCTCTGCGCAGCGTCGGGAGTGCTTTGGTTGG
GCCATCGCATGTGGGACTCCTTAATACGACCATAACGCTGACACAGGGAG
CTGGACTCATGATATCTGGGCCACTCCTAGCTGGATTGTTTCGAGCAGGG
ATGGCCTGGGAAGGGGTGTGGATGGGGCTGCCATGGATGGCAGGAGTTAT
CCTGTTTGCAGCAACCATTCTGACGGTGTATTGTCTCCAAGTCCAGGGCT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011852-T1.utr5p1 | KJC3_011852-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011852-T1.utr3p1 | KJC3_011852-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1848103..1850335 + |
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