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KJC3_011856-T1, KJC3_011856-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011856-T1
Unique NameKJC3_011856-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1860203..1862288-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011856-T1 ID=KJC3_011856-T1|Name=KJC3_011856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2086bp|location=Sequence derived from alignment at ch8:1860203..1862288- (Aspergillus niger KJC3)
CTTTTTGCTGGGGATAAATAGAAAGATATCGTCACATTCCATTGCTTTTC
CCAGCCGGTCTGTTGACTTTCAAGTTCTTTTTCTATCTCCAAAGGGGGGA
AGGGATACTTCAGTCCTTGCACTACTATTCCTATTCATGAGTACATGAAC
GATTCGACGATATTTCAAACTGTTTTGTTTTTTTGTTTTCATGAGTTTAT
GATTTAACGAAGCAAAGGAATCAAACACGAACTACGACCCAAAATAATCT
GGAAACTGGAAACACAATGTCTCTGAATCCATCTGACGCAAGGGGCGTCA
ACTCGACCGCGGGTGAAGAAAGTCAACAATATGTAACTTTACTACCGGCT
CAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCA
GACGCCGCTGCTTCGGTCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTT
CAGCAATGCATCACTATTCATCTCCGCCCTGGTGGAAGACGGCGCAGCAG
GTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTT
CTCGCAATTCTTTGGCGCGTCGATGAATGTCATGACGCAGTTTTTGGAAA
TCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAGGTGCGTTCTATA
TCGCCTACCTATCTTTCTGCTGGAAAGCTCTGCTCTGCTCTGCTGCTAGT
GGATGGATGATCTACTGTGCGCTGTGTAGGGGACGTCCACTCGTGGGGCA
CCCTCTAGTAGACACTAGATATCCCTGCTCAGGAACCCGGCTGATCCCGT
AAGAACAGATCCTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTAC
CTCTACATGTGGTATGCGCGTGTACCGCATCCGTTCGGAACGCGCGATAC
CTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACG
GGCTCTATTACTCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTG
ACCTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGCTCGCTTTTGATCCC
CAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGG
CGGGTGTCGTTCTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGC
GACTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCCACCGATAGCTACCA
CCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGT
GTGCGTACACCACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTC
TCGGTGACTTACTTCTCCACATTCACGACAGTCGTAGCTACGCTGGCGAT
GCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAAT
GGACGCTGCTTCTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTG
CTCACAGCAGGTCTGGCATATGTACCGCCGGTGCGGAAGACCAAGGCGTC
AGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGT
CCGCGAAGCCAACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACG
CAGATGCTGTTTGCCGTGTTCTATGACCGGGCGATCTGGGGTAGTACGTT
GTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGT
ATGTGGCCATGGCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAG
GAGGGCGGAGATCAAGAGGGCACGGACGAGAACCGGGCTGGAGTGGCTGC
AGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCG
CATGAGGCGTTTTGCAAATCGCGCGACGATCTGAGGGATTTGCTTGATAA
ATTGGGGAAGGAGGAAGCAGGTCGGCGTCACTGTGCATATCCCGACAGTA
GAAGGAAAGAGATTGAGCGATGCCACATGTCGATGGAGGAGAAGGGGCTC
ACATTGCATACACAGCATACTGGCGCAGAGCATTTATACAAAGGGTATAT
ATAAAAATTGTAGTTATTGATTGACTGATTGATAGA
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Coding sequence (CDS) from alignment at ch8:1860203..1862288-

>KJC3_011856-T1 ID=KJC3_011856-T1|Name=KJC3_011856-T1|organism=Aspergillus niger KJC3|type=CDS|length=2838bp|location=Sequence derived from alignment at ch8:1860203..1862288- (Aspergillus niger KJC3)
ATCCTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCTCTACAT
GTGGTATGCGCGTGTACCGCATCCGTTCGGAACGCGCGATACCTTCACTC
TGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACGGGCTCTAT
TACTCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGACCTTTTT
AGCGCCGATCCTGAGCTGCTATGCTTGCTCGCTTTTGATCCCCAACGAGT
TCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGGCGGGTGTC
GTTCTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGACTCCGA
GCCGGAGCAGGGCGATAAGCCCGGTGCCACCGATAGCTACCACCACGTGC
TGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGTGTGCGTAC
ACCACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTCGGTGAC
TTACTTCTCCACATTCACGACAGTCGTAGCTACGCTGGCGATGCTGGTCG
TGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAATGGACGCTG
CTTCTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCTCACAGC
AGGTCTGGCATATGTACCGCCGGTGCGGAAGACCAAGGCGTCAGTAGACT
GGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGTCCGCGAAG
CCAACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCAGATGCT
GTTTGCCGTGTTCTATGACCGGGCGATCTGGGGTAGTACGTTGTCGGCGG
TGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGTATGTGGCC
ATGGCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGAGGGCGG
AGATCAAGAGGGCACGGACGAGAACCGGGCTGGAGTGGCTGCAGAAGAGC
GTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCGCATGAATG
TCTCTGAATCCATCTGACGCAAGGGGCGTCAACTCGACCGCGGGTGAAGA
AAGTCAACAATATGTAACTTTACTACCGGCTCAGAATCAAGTCGATGAGC
AGCACCAACAGCACGTTGTCTATTCGGAGCAGACGCCGCTGCTTCGGTCG
GGACTTGGTCATGAGTCTGCTTCTGCTTCTTCAGCAATGCATCACTATTC
ATCTCCGCCCTGGTGGAAGACGGCGCAGCAGGTAGCCTGCGATGTCTGGC
TGCAGGGCAAGGGCATGATCCTGGTCATGTTCTCGCAATTCTTTGGCGCG
TCGATGAATGTCATGACGCAGTTTTTGGAAATCAAAGGTCGTGATGGGAA
GGGGTTTCATCCGTTTCAGATCCTGTTCGCCCGCATGTCTATCACGGTTC
TCGCTAGTTACCTCTACATGTGGTATGCGCGTGTACCGCATCCGTTCGGA
ACGCGCGATACCTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTT
TGGCGTCTACGGGCTCTATTACTCCGTGCAGTACCTGCCGCTCTCCGAGG
CGACCGTGGTGACCTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGCTCG
CTTTTGATCCCCAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACT
GGTCTCGCTGGCGGGTGTCGTTCTCATCGCTCGGCCGTTCCCGTTCATGC
GATCGGGCGGCGACTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCCACC
GATAGCTACCACCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCT
GGGTGCCTCGTGTGCGTACACCACGATCCGGATGATCGGACAGCGCTGCC
ACCCGCTCGTCTCGGTGACTTACTTCTCCACATTCACGACAGTCGTAGCT
ACGCTGGCGATGCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCAC
AGTGCTGGAATGGACGCTGCTTCTGGGGTTAGGTGTCAGCGGATTCCTGC
TGCAGTTCCTGCTCACAGCAGGTCTGGCATATGTACCGCCGGTGCGGAAG
ACCAAGGCGTCAGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGA
AGAAGAGCCGTCCGCGAAGCCAACATCGTCCGGATCACGGGCGACTTTCA
TGTTGTACACGCAGATGCTGTTTGCCGTGTTCTATGACCGGGCGATCTGG
GGTAGTACGTTGTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGT
GAGCGCCATGTATGTGGCCATGGCGCGAGAGGGCGCAAAGGGAACCTCAT
CCGAGGAGAAGGAGGGCGGAGATCAAGAGGGCACGGACGAGAACCGGGCT
GGAGTGGCTGCAGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAG
CGGGGGTCGCGCATGAATGTCTCTGAATCCATCTGACGCAAGGGGCGTCA
ACTCGACCGCGGGTGAAGAAAGTCAACAATATGTAACTTTACTACCGGCT
CAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCA
GACGCCGCTGCTTCGGTCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTT
CAGCAATGCATCACTATTCATCTCCGCCCTGGTGGAAGACGGCGCAGCAG
GTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTT
CTCGCAATTCTTTGGCGCGTCGATGAATGTCATGACGCAGTTTTTGGAAA
TCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011856KJC3_011856Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011856-T1KJC3_011856-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011856-T1.cdsKJC3_011856-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011856-T1.utr3p1KJC3_011856-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011856-T1.exon2KJC3_011856-T1.exon2Aspergillus niger KJC3exon
KJC3_011856-T1.exon1KJC3_011856-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011856-T1.utr5p1KJC3_011856-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000620
DBxrefPFAM:PF00892
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1860203..1862288 -
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