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KJC3_011862-T1, KJC3_011862-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011862-T1
Unique NameKJC3_011862-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1872204..1874472-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011862-T1 ID=KJC3_011862-T1|Name=KJC3_011862-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2269bp|location=Sequence derived from alignment at ch8:1872204..1874472- (Aspergillus niger KJC3)
AAAGAGCTTGGGTTTGGGATATCCAGGCTGATTTCCAGGCGTGCGGGGAT
CTTTTGTCATTTGTGCTCTTGTGTTTCGGTCAGGCAGTCGATCCATAGCT
TTTTTTTTTTGACTCCGCTACTGACTCGACCTGCGCCCCGGATGAATCGC
TATCGAAATGCTCCCGGCCTCAGAGGCCCTACCAAGGCAACTCCTAGCAC
CTTGTGTCAAAAATGCCTGAAACGAGATACGTAAAGACCATCTACACTTT
ATTTTCATATTTGCTGACGGTCCCAGCACGGCACTATAGTTATGAATGTA
CAGTGACCGCCCAGGAGCGGCCGTACATGTCTCGTCCATCACGCACGCAG
CAGTTGTTGAACCCCAAACTGCGGCCGCAACTCTCAGCTGATGTCCCTAG
TGACTCGTCGCGCACGTAGGTCTACTCTTTCTATCTATCTCATGAGCGAG
CTGTCAGGAGTAGGTGCTAAAATGGGTATAGCAAAGGACTAGCGACTGAG
ATTCTTGCTAAGCGTGAGGAAGAACGAGGTCGCAAAAGAGAGCATGATGA
GGCGGACCCTCTTGACAGTCGCACTCAGACCTCTAAACGAGCTCGGTCAG
CATCATCACATTCGGTCAGCTCGGTATCGACGATATCGACCAGTCGGTCA
CACTCGAGATCGCCCTCTCGCCATGCGGACTATGGTGCTAGGAAGAGCCA
TGGCCGAACAAGGTCCATCTCTTCCCATGTCTCGGGGCCCAGGAAGAGAC
GCTATAGCGATGCGTCTTCTCATGATTCTGCAGTCTCCTACTCGTCCAGG
GACAGAGATTCACGTTCTCGATCGCGTGAATGGCAGGGTGACAGAAACAC
CCGGCGGAGGCGTCGAGAATCCAGCCCCGAAGAACGGGGCCGGCCTCGAC
ACATGTCGCGGGACCGTGAACGACGAGACAGGTCCCGAAGTCAGAGCGTG
GATCACAGCCGAATTGCCAGGGCGAGACGGTCTGCGACCCCAGAGAAGCG
GCCGGAGCGTAGCTATCCTGCTTCAAGAGATTATAGGGATGGTCCGGGTC
GCTCGCAGAAGGATGGACGGGGCCAAGGACGTGCGCCGCCTCCGCCCCGT
GAGAGGAGTCTCAGTCCTTACAGCAAGCGTCTTGCGTTGACGCAGTCCAT
GAACATGGGCAGCTAGGTGTCTTTGGCTTGAGGTTTGGAATAGAAAAAGT
ACTGGACAAAAGGATGTGCGGGAGTTTGGCGTTTTCCCTCTTTCGAGGCT
CATCACCACGGGCTGGTTCTCCAAGGATTATAAACGAGGGGCTGTACTAT
AGTAAGACCATACAGAAGGCTAATGCATTGAAAGTAATTTTCCACTTAAA
CCGTATGCAAAGATCCTCAACGCCTTGCGACACTTGTCCCAAATCCTCCA
ACTATGGGCGCCTGTAAAAGCAAGATGCAAAGAGATGAGACCGAATCGCA
ACTGCTACCATACATCTTTCCATGGGGTATCAAAATCATGCCTCATCATC
CTCCAGACCGTTGCCTGCCTCCTCTTCTTCCCTCTCACGGACATGAATGC
CCTGAACCAACATATCACCTTCAATGCCCACTTCTTCGCCCTGTTCGCCT
CCATTGGCACCTGTCCCTTTCGCCTGAGCTGCGCGTTGTGCCTCTTCTAT
CCGTTGGCGAACAAGCTTCGCAATCGCATTCTGAGTTCGAACGTTGAGGA
CGTTCATCTTCTCATCCAAGTCCCGCTTCAAATCCCAATTCGGCTTCTTA
GGCTGTAGCTTGAAGAGGTCAATGGGCTGGTCACCTTCCTCATCCTTCTT
CGCTTGCTCTGCGGTGGCCCTTGCGATCTCTGCAGCCTGCGCTTCCACGG
TGATCTGACCATCTGACGGGGCGGTGTCGAAACCCAGCTTTGGGCCGCGC
ATTTCTGCGTCGTAGTTCCTCCCGGAGAGGTATTGCTTTGTTACATCGGG
GGCAGCATCTTCTAATTCTTCATCGGCGGCGCCAGTTTCGGTCAATGGCT
CTGGCTCTGGTTGTTTGCGCTTCAGCGCGGCAAGCTTTGCAAGGCGTGCT
TTGCGCTCATTTGCCGCCGCATCAAGAGAAGCATGATTTGACGACATCAC
GGCGGGGGAGGAGGGTCAGATATAAAAATCGAGCGGGGGAGGTTTTCACG
ATATGGTGTGAGTACGGCGTGTAAAAGGAGGAACGATTCTTTTGATTCTG
CCCGCAGAAAACTCCAAGTCTCTTCGAGAGGGTCTCGCGTCGCCCGAGAA
TCTCAGACAAAGTAATGAT
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Coding sequence (CDS) from alignment at ch8:1872204..1874472-

>KJC3_011862-T1 ID=KJC3_011862-T1|Name=KJC3_011862-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch8:1872204..1874472- (Aspergillus niger KJC3)
CAAAGGACTAGCGACTGAGATTCTTGCTAAGCGTGAGGAAGAACGAGGTC
GCAAAAGAGAGCATGATGAGGCGGACCCTCTTGACAGTCGCACTCAGACC
TCTAAACGAGCTCGGTCAGCATCATCACATTCGGTCAGCTCGGTATCGAC
GATATCGACCAGTCGGTCACACTCGAGATCGCCCTCTCGCCATGCGGACT
ATGGTGCTAGGAAGAGCCATGGCCGAACAAGGTCCATCTCTTCCCATGTC
TCGGGGCCCAGGAAGAGACGCTATAGCGATGCGTCTTCTCATGATTCTGC
AGTCTCCTACTCGTCCAGGGACAGAGATTCACGTTCTCGATCGCGTGAAT
GGCAGGGTGACAGAAACACCCGGCGGAGGCGTCGAGAATCCAGCCCCGAA
GAACGGGGCCGGCCTCGACACATGTCGCGGGACCGTGAACGACGAGACAG
GTCCCGAAGTCAGAGCGTGGATCACAGCCGAATTGCCAGGGCGAGACGGT
CTGCGACCCCAGAGAAGCGGCCGGAGCGTAGCTATCCTGCTTCAAGAGAT
TATAGGGATGGTCCGGGTCGCTCGCAGAAGGATGGACGGGGCCAAGGACG
TGCGCCGCCTCCGCCCCGTGAGAGGAGTCTCAGTCCTTACAGCAAGCGTC
TTGCGTTGACGCAGTCCATGAACATGGGCAGCTAGGGCACTATAGTTATG
AATGTACAGTGACCGCCCAGGAGCGGCCGTACATGTCTCGTCCATCACGC
ACGCAGCAGTTGTTGAACCCCAAACTGCGGCCGCAACTCTCAGCTGATGT
CCCTAGTGACTCGTCGCGCACATGAATCGCTATCGAAATGCTCCCGGCCT
CAGAGGCCCTACCAAGGCAACTCCTAGCACCTTGTGTCAAAAATGCCTGA
AACGAGCAAAGGACTAGCGACTGAGATTCTTGCTAAGCGTGAGGAAGAAC
GAGGTCGCAAAAGAGAGCATGATGAGGCGGACCCTCTTGACAGTCGCACT
CAGACCTCTAAACGAGCTCGGTCAGCATCATCACATTCGGTCAGCTCGGT
ATCGACGATATCGACCAGTCGGTCACACTCGAGATCGCCCTCTCGCCATG
CGGACTATGGTGCTAGGAAGAGCCATGGCCGAACAAGGTCCATCTCTTCC
CATGTCTCGGGGCCCAGGAAGAGACGCTATAGCGATGCGTCTTCTCATGA
TTCTGCAGTCTCCTACTCGTCCAGGGACAGAGATTCACGTTCTCGATCGC
GTGAATGGCAGGGTGACAGAAACACCCGGCGGAGGCGTCGAGAATCCAGC
CCCGAAGAACGGGGCCGGCCTCGACACATGTCGCGGGACCGTGAACGACG
AGACAGGTCCCGAAGTCAGAGCGTGGATCACAGCCGAATTGCCAGGGCGA
GACGGTCTGCGACCCCAGAGAAGCGGCCGGAGCGTAGCTATCCTGCTTCA
AGAGATTATAGGGATGGTCCGGGTCGCTCGCAGAAGGATGGACGGGGCCA
AGGACGTGCGCCGCCTCCGCCCCGTGAGAGGAGTCTCAGTCCTTACAGCA
AGCGTCTTGCGTTGACGCAGTCCATGAACATGGGCAGCTAGGGCACTATA
GTTATGAATGTACAGTGACCGCCCAGGAGCGGCCGTACATGTCTCGTCCA
TCACGCACGCAGCAGTTGTTGAACCCCAAACTGCGGCCGCAACTCTCAGC
TGATGTCCCTAGTGACTCGTCGCGCACATGAATCGCTATCGAAATGCTCC
CGGCCTCAGAGGCCCTACCAAGGCAACTCCTAGCACCTTGTGTCAAAAAT
GCCTGAAACGAGCAAAGGACTAGCGACTGAGATTCTTGCTAAGCGTGAGG
AAGAACGAGGTCGCAAAAGAGAGCATGATGAGGCGGACCCTCTTGACAGT
CGCACTCAGACCTCTAAACGAGCTCGGTCAGCATCATCACATTCGGTCAG
CTCGGTATCGACGATATCGACCAGTCGGTCACACTCGAGATCGCCCTCTC
GCCATGCGGACTATGGTGCTAGGAAGAGCCATGGCCGAACAAGGTCCATC
TCTTCCCATGTCTCGGGGCCCAGGAAGAGACGCTATAGCGATGCGTCTTC
TCATGATTCTGCAGTCTCCTACTCGTCCAGGGACAGAGATTCACGTTCTC
GATCGCGTGAATGGCAGGGTGACAGAAACACCCGGCGGAGGCGTCGAGAA
TCCAGCCCCGAAGAACGGGGCCGGCCTCGACACATGTCGCGGGACCGTGA
ACGACGAGACAGGTCCCGAAGTCAGAGCGTGGATCACAGCCGAATTGCCA
GGGCGAGACGGTCTGCGACCCCAGAGAAGCGGCCGGAGCGTAGCTATCCT
GCTTCAAGAGATTATAGGGATGGTCCGGGTCGCTCGCAGAAGGATGGACG
GGGCCAAGGACGTGCGCCGCCTCCGCCCCGTGAGAGGAGTCTCAGTCCTT
ACAGCAAGCGTCTTGCGTTGACGCAGTCCATGAACATGGGCAGCTAGGGC
ACTATAGTTATGAATGTACAGTGACCGCCCAGGAGCGGCCGTACATGTCT
CGTCCATCACGCACGCAGCAGTTGTTGAACCCCAAACTGCGGCCGCAACT
CTCAGCTGATGTCCCTAGTGACTCGTCGCGCACATGAATCGCTATCGAAA
TGCTCCCGGCCTCAGAGGCCCTACCAAGGCAACTCCTAGCACCTTGTGTC
AAAAATGCCTGAAACGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011862KJC3_011862Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011862-T1KJC3_011862-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011862-T1.cdsKJC3_011862-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011862-T1.utr3p1KJC3_011862-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011862-T1.exon3KJC3_011862-T1.exon3Aspergillus niger KJC3exon
KJC3_011862-T1.exon2KJC3_011862-T1.exon2Aspergillus niger KJC3exon
KJC3_011862-T1.exon1KJC3_011862-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011862-T1.utr5p1KJC3_011862-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF13917
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1872204..1874472 -
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