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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1878257..1879383- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011864-T1 ID=KJC3_011864-T1|Name=KJC3_011864-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1127bp|location=Sequence derived from alignment at ch8:1878257..1879383- (Aspergillus niger KJC3)
CGAAAACAACCGGCGACTCCTGATATCCCATTGCCCCTTACTGGTTTCAA
TCCCTTTCGGTCTTTTCGACTTGATCCATCCGATCCCACCGCCTGGCCTC
GAAGCCAACATATCCCATTCATCAACACAACCTCCCGAAAAGACACCCAT
TCTTAAACCTCCCTCACCACCAACACTATGGCCGGAGGTGCTACCAAGTT
CCGTCATTTGAGCCGCAAGTCCTCTCACAGACAGGCTCTGCTCCGCAACC
TCGTCACCTCCCTCTTCCAGCATGAATCCATCACAACCACATGGGCCAAG
GCCAAGGAGGCGCAACGACTGGCCGAGAAGTTGATCACCCTGGGCAAGAA
GAACACCGAAGCCAGTCGGAAACGCGCATTGTCGACGTTTTATGTATGAC
GCAGTCCTTATCTTCTCTTTCTCAAACACATACATACATACCGTGGAGGA
CATACGATAGAGGAAAGCGAACATTTTCAACTAACCAAGGAATAATAGAC
CCCCCACGAACTCCTCCCCAAACTCTTCGGTCCTCTTCGTGAACGCTACG
CCGAACGCCCCGGTGGCTACACGCGAGTTCTGCGCGTCGAACCCAAGAAG
GACGATCAAGCCGCCAGCGCAATCCTGGAGTTGGTAGATGGACCTAAAGA
TATGCGGTTTGCTTTGACGGCGCGGACGGTTGCTAGACAGCGGTCTCAGG
GCTTGGAGACCCTCAATGAACTCACTACGATGAATGTCAATAAGGTCACA
CGGTTCCGGAAAGGAGGGATTGCTGATCTGGAGAGGGAGATCAAGCGGTT
AGAGATCACGGGTCACGGGAAGGAGGACGCGGGGAAGGCGAAGCCTGCGA
AGCAATAAAGTGATGAATGAGTGGGTGAGTGAGTGATGGGTGTGGTAGTG
GTGGCCTAGTTGGCCTTTATATTGTGTATCTTTATTATTCCTTCACCTTC
ACTGCTGTGTGCTTGGGCCCTGTGTTTTGGCTAGTCATGATTGTGTAATT
TTAGCTGTTATTTCCCCCTGTGGTGTCGTGTATGTAGATTGGACCGTTCC
TCCCCAGTCATCGAGATTATCTCAGGAAGTGTAGACTACTTATTACATCT
ATTAACAAGATACTAGCACTTGGTGTC back to topCoding sequence (CDS) from alignment at ch8:1878257..1879383- >KJC3_011864-T1 ID=KJC3_011864-T1|Name=KJC3_011864-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch8:1878257..1879383- (Aspergillus niger KJC3)
ACCCCCCACGAACTCCTCCCCAAACTCTTCGGTCCTCTTCGTGAACGCTA
CGCCGAACGCCCCGGTGGCTACACGCGAGTTCTGCGCGTCGAACCCAAGA
AGGACGATCAAGCCGCCAGCGCAATCCTGGAGTTGGTAGATGGACCTAAA
GATATGCGGTTTGCTTTGACGGCGCGGACGGTTGCTAGACAGCGGTCTCA
GGGCTTGGAGACCCTCAATGAACTCACTACGATGAATGTCAATAAGGTCA
CACGGTTCCGGAAAGGAGGGATTGCTGATCTGGAGAGGGAGATCAAGCGG
TTAGAGATCACGGGTCACGGGAAGGAGGACGCGGGGAAGGCGAAGCCTGC
GAAGCAATAAATGGCCGGAGGTGCTACCAAGTTCCGTCATTTGAGCCGCA
AGTCCTCTCACAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTC
CAGCATGAATCCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACG
ACTGGCCGAGAAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTC
GGAAACGCGCATTGTCGACGTTTTATACCCCCCACGAACTCCTCCCCAAA
CTCTTCGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACAC
GCGAGTTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAA
TCCTGGAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCG
CGGACGGTTGCTAGACAGCGGTCTCAGGGCTTGGAGACCCTCAATGAACT
CACTACGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTG
CTGATCTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAG
GAGGACGCGGGGAAGGCGAAGCCTGCGAAGCAATAAATGGCCGGAGGTGC
TACCAAGTTCCGTCATTTGAGCCGCAAGTCCTCTCACAGACAGGCTCTGC
TCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAATCCATCACAACCACA
TGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAGAAGTTGATCACCCT
GGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGCATTGTCGACGTTTT
AT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011864-T1.utr3p1 | KJC3_011864-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011864-T1.utr5p1 | KJC3_011864-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264MZ1 |
| DBxref | InterPro:IPR036373 |
| DBxref | InterPro:IPR000456 |
| DBxref | PFAM:PF01196 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1878257..1879383 - |
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