You are here

Home

KJC3_011868-T1, KJC3_011868-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011868-T1
Unique NameKJC3_011868-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1881884..1885187-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011868-T1 ID=KJC3_011868-T1|Name=KJC3_011868-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3304bp|location=Sequence derived from alignment at ch8:1881884..1885187- (Aspergillus niger KJC3)
CTTCTCCTCCTAACATCCTCACTTCTTCCACCCCCAAAAGTCTTACCACG
TGCAGTTTGTTATTCTCCGGTTTGACCTGGTCATACAATCCTCAACCGAT
GCAATTTTGAGCAAACTTTCAGCGACCTCCAAAGGTATGCTTCCGTTCGC
GACAATATGACTCCTCCACCTTCTAACACTGTGCGTGCCTGACTAGAAAG
CAATTGGAGCTTGTCAAGACCTTTAAGCCTGCCTGTCAACTCAATACGAG
ACCTTTACGTGGTTAATAGCAACCATGCCGTCCACTTCCGCGGCCCTAAC
GCCTGGATTGGCGTCGTTCCTCAAGTCCTTGAAGACGAATCCGATTGATA
CATCGATTGACGATCTGATCTCGTGCGTCCTCGACGTCATATCACCGCGT
GTCGCAGCAGCTCGTGCAACATACTGACCAGCCTCTAGGCTTCTGAAACG
CAGACAGATTCGCCATTCCAGATCATGCGCGACCGCAACCGCCTACCTCC
TGCGCAGTGTTATCTCAGCTACTCGGACTTCGGATGCAAACAAGATGATC
GAGCGGGTCCAGCATGTGGGAAGGCGCGTGATGGCCGCTCAGCCCAGGGA
AATGGTGGTCGGAAATATTGTCAGACGTGTGCTCGGATTGATCCGTGATG
AAGCGGAAGACGACAGAGAGGCCGACTTCACTCTGAGTGAAGCGGGCTCG
GAGAGCCAGCCTCAGACCCCTCGTGCCTTGGATGGTCAGTCCTGTTTTAT
AACACATCGAACCAGGATTATGCAAAAGCTAACCCACAGCGCCGTTTGTA
GACCCCTCCGAGGTTCTCTCTTCTCGCCATGAAGGTTCCGACCGGTCATC
CTCGAGACAGCCTTTCACTTCGCTGTCAGCTACACCCATTTCCATGTTCA
GTCTCCTCTCACACCCAGAGCCTGAGTCGTCTCTGCCTGGCACCCCGGCC
TCTGCGTCTCCGTCTGGCCGCCTACTGGGCCAAAGTCACAACAAAGACAT
CCGTGCCGAAGTCCTGGACGGTATCAACGAAATTATCGATGAGTTGGGCC
AGGTAGACGACCAGATTGCGGCCTACGCCCTGGAACACATTCACTCCAAC
GAAATCATCCTGACACACACATCCTCAACTACCGTCCAGAAATTCTTGCT
CAAGGCTGCGGCCAAGCGCAAGTTCACCGTGATCCATGCCGAATCTTATC
CCAACAACCATGAAGCGACCCATGCCACTGTCAGCGGACAGGCCCCCAAG
GACGACGACATTCTGAGCACCGAGGCTTTCCAGAAACCTTTGATCGCCCT
GGGCATCACTGTTATCCTGATCCCTGATTCCGCAGTCTTCGCGCTCATGT
CCCGTGTCAACAAGGTCATCTTGGGCACGCACTCGGTTCTTGCCAACGGC
GGATTGGTGGCTGCGGCAGGCACGCGGGTCATCGCTCGCGCGGCCAAGGT
GCACCAGACCCCCGTGGTCGTTGTGAGCGGTGTCTACAAGCTCAGCCCTG
TCTACCCATTCGATTTCGACTCGCTGATCGAGTATGGCGATGTCAGCAAG
GTTATTGGATACGAAGACGGTGACCTGGTAGACCAGATTGACGTGCAGAA
CCCGCTGTACGACTATGTCCCTGCGGAACTTGTCGATCTTTACATCACCA
ACCTGTAAGCTACCATTCCTTTTGCCCCGTTTCATCTGCAGAACTGACAA
GCATTATAGGGGAGGTCATGCGCCGTCTTACCTTTACCGTATTGTCTCGG
ACCACTACCGCAAGGAGGATATCAATGTCTAATGGTTTTGAGGATTATGG
AAATGGAAATGAATCAACATATGAACAAAAGCTCAAGGGAATGCAGATGG
CTGCAATATGACATGCAAAAAGTTCGGCTATAGATGAGTAAGGCGTAAGG
GCATAGACAATGGAACGCAACGATACCCGCGGAGATACTAGGATAATCTT
TATGAATGAGATCAGTCCTTATCGATTGATGCATCCAACCAACGTAGATA
GTCCACGCGTTCTAGATCAGCGAATTGTAGCAAACTTAAAAATTTATTAA
ATTTACGAAACAATTACGACAAGAGCTAGACTCATTTTTTTGAAGGATTT
GAATTTTAGGGCCCTCCCAAAGAAATAAATCATGGCGCCATCTTTTATGG
ATATATCAATCGTAGTACGCTGCAAATGGTATTTATTTTGCAGGGTCTCA
TCCGTCCTGAACCATCAATTCCAGACCATAGACTTGTGTTTGCTTTGCCT
TTGCCCCGAAGCTTCTTCCATGGAATGGGCCCCCTTCCACCCCGCTAATA
GCATCTTTATTAAATTCCCCAGGGTTTGGGTTATTTAAGAGCGGGGCTTC
TCCTTCTTCTCCTTCCAGAGAGCGAGCAGACCGACACCGGAAACCTTGAC
GACCTTGAAACGGACACCGGGAATATCACCCTTGGCCTTGCCCTTACGAC
CGAAACCGGCGAGGAGGACCTCGTCGTTCTCATCGATGAAGTTCAAGCAA
CCATCGTTGGGGACTATACAGGAAATATGTTAGCCAATCGATACCCTCTT
AAAGAATATGCGATATTTCCCGTTTGCCACTCCGTCCTTTATTCCCTTCT
CCTTCTTCTGCTCCATTCTCCGCACAATATCCCATCACAAAATCCCCAAA
CCATAAACATCCATCACAACCGGGAAATAGAAAAAGAAAAGGATAGGATC
ACCCACCGAAAGCGGTAACCTTCTTGCCGTTCTTGATGAGCTGGACCTTG
ACACACTTGCGAATAGCGGAGTTGGGCTGCTTGGCCTCAACACCGACCTT
CTCAAGAACGATACCCTTGGCGTGGGAGGCACCTCCGAAGGGAGAGGACT
TGTAGGCAGTACCGAGGAGGCGCTTCTTGTAGTGCAGATCGGCCCAGCGG
TTCTCGCGACGGGTGGTCGCGAGCTTGCGGGCGGCGTTCAAACCACGGGG
CTGTCCCTTACCCATCTTGTCGGATTATGTTCGAAGGAGGGTGAACTGTA
GAGCAAGAATTTCCGTTAGAATTATGTATTTTCCAATATATGGGTGGTGT
TCGGAAGAAGCTGAAGTTGCAGGGTTCTGGTGGCGGACATGATGCGGATT
TCAAGATTCGGGGTTATATAGGCGGACTTTGTGCGTAGGGAAATTTCTCG
TGTCTTTTTCTTTTCTTTTCGCAACCAGGGAAGATCGACTGGTGATATAA
ATTCACAATAGGGGGTCTCTATACGTACCGAACTGATGGATAAAATTGGC
TGGATGGGCGGATGGTTGTCGAAAGTCGAAGGGGGGGTTCGCTTTCACGG
CCGG
back to top

Coding sequence (CDS) from alignment at ch8:1881884..1885187-

>KJC3_011868-T1 ID=KJC3_011868-T1|Name=KJC3_011868-T1|organism=Aspergillus niger KJC3|type=CDS|length=5280bp|location=Sequence derived from alignment at ch8:1881884..1885187- (Aspergillus niger KJC3)
GGGAGGTCATGCGCCGTCTTACCTTTACCGTATTGTCTCGGACCACTACC
GCAAGGAGGATATCAATGTCTAAACCCCTCCGAGGTTCTCTCTTCTCGCC
ATGAAGGTTCCGACCGGTCATCCTCGAGACAGCCTTTCACTTCGCTGTCA
GCTACACCCATTTCCATGTTCAGTCTCCTCTCACACCCAGAGCCTGAGTC
GTCTCTGCCTGGCACCCCGGCCTCTGCGTCTCCGTCTGGCCGCCTACTGG
GCCAAAGTCACAACAAAGACATCCGTGCCGAAGTCCTGGACGGTATCAAC
GAAATTATCGATGAGTTGGGCCAGGTAGACGACCAGATTGCGGCCTACGC
CCTGGAACACATTCACTCCAACGAAATCATCCTGACACACACATCCTCAA
CTACCGTCCAGAAATTCTTGCTCAAGGCTGCGGCCAAGCGCAAGTTCACC
GTGATCCATGCCGAATCTTATCCCAACAACCATGAAGCGACCCATGCCAC
TGTCAGCGGACAGGCCCCCAAGGACGACGACATTCTGAGCACCGAGGCTT
TCCAGAAACCTTTGATCGCCCTGGGCATCACTGTTATCCTGATCCCTGAT
TCCGCAGTCTTCGCGCTCATGTCCCGTGTCAACAAGGTCATCTTGGGCAC
GCACTCGGTTCTTGCCAACGGCGGATTGGTGGCTGCGGCAGGCACGCGGG
TCATCGCTCGCGCGGCCAAGGTGCACCAGACCCCCGTGGTCGTTGTGAGC
GGTGTCTACAAGCTCAGCCCTGTCTACCCATTCGATTTCGACTCGCTGAT
CGAGTATGGCGATGTCAGCAAGGTTATTGGATACGAAGACGGTGACCTGG
TAGACCAGATTGACGTGCAGAACCCGCTGTACGACTATGTCCCTGCGGAA
CTTGTCGATCTTTACATCACCAACCTGCTTCTGAAACGCAGACAGATTCG
CCATTCCAGATCATGCGCGACCGCAACCGCCTACCTCCTGCGCAGTGTTA
TCTCAGCTACTCGGACTTCGGATGCAAACAAGATGATCGAGCGGGTCCAG
CATGTGGGAAGGCGCGTGATGGCCGCTCAGCCCAGGGAAATGGTGGTCGG
AAATATTGTCAGACGTGTGCTCGGATTGATCCGTGATGAAGCGGAAGACG
ACAGAGAGGCCGACTTCACTCTGAGTGAAGCGGGCTCGGAGAGCCAGCCT
CAGACCCCTCGTGCCTTGGATGATGCCGTCCACTTCCGCGGCCCTAACGC
CTGGATTGGCGTCGTTCCTCAAGTCCTTGAAGACGAATCCGATTGATACA
TCGATTGACGATCTGATCTCGGGAGGTCATGCGCCGTCTTACCTTTACCG
TATTGTCTCGGACCACTACCGCAAGGAGGATATCAATGTCTAAACCCCTC
CGAGGTTCTCTCTTCTCGCCATGAAGGTTCCGACCGGTCATCCTCGAGAC
AGCCTTTCACTTCGCTGTCAGCTACACCCATTTCCATGTTCAGTCTCCTC
TCACACCCAGAGCCTGAGTCGTCTCTGCCTGGCACCCCGGCCTCTGCGTC
TCCGTCTGGCCGCCTACTGGGCCAAAGTCACAACAAAGACATCCGTGCCG
AAGTCCTGGACGGTATCAACGAAATTATCGATGAGTTGGGCCAGGTAGAC
GACCAGATTGCGGCCTACGCCCTGGAACACATTCACTCCAACGAAATCAT
CCTGACACACACATCCTCAACTACCGTCCAGAAATTCTTGCTCAAGGCTG
CGGCCAAGCGCAAGTTCACCGTGATCCATGCCGAATCTTATCCCAACAAC
CATGAAGCGACCCATGCCACTGTCAGCGGACAGGCCCCCAAGGACGACGA
CATTCTGAGCACCGAGGCTTTCCAGAAACCTTTGATCGCCCTGGGCATCA
CTGTTATCCTGATCCCTGATTCCGCAGTCTTCGCGCTCATGTCCCGTGTC
AACAAGGTCATCTTGGGCACGCACTCGGTTCTTGCCAACGGCGGATTGGT
GGCTGCGGCAGGCACGCGGGTCATCGCTCGCGCGGCCAAGGTGCACCAGA
CCCCCGTGGTCGTTGTGAGCGGTGTCTACAAGCTCAGCCCTGTCTACCCA
TTCGATTTCGACTCGCTGATCGAGTATGGCGATGTCAGCAAGGTTATTGG
ATACGAAGACGGTGACCTGGTAGACCAGATTGACGTGCAGAACCCGCTGT
ACGACTATGTCCCTGCGGAACTTGTCGATCTTTACATCACCAACCTGCTT
CTGAAACGCAGACAGATTCGCCATTCCAGATCATGCGCGACCGCAACCGC
CTACCTCCTGCGCAGTGTTATCTCAGCTACTCGGACTTCGGATGCAAACA
AGATGATCGAGCGGGTCCAGCATGTGGGAAGGCGCGTGATGGCCGCTCAG
CCCAGGGAAATGGTGGTCGGAAATATTGTCAGACGTGTGCTCGGATTGAT
CCGTGATGAAGCGGAAGACGACAGAGAGGCCGACTTCACTCTGAGTGAAG
CGGGCTCGGAGAGCCAGCCTCAGACCCCTCGTGCCTTGGATGATGCCGTC
CACTTCCGCGGCCCTAACGCCTGGATTGGCGTCGTTCCTCAAGTCCTTGA
AGACGAATCCGATTGATACATCGATTGACGATCTGATCTCGGGAGGTCAT
GCGCCGTCTTACCTTTACCGTATTGTCTCGGACCACTACCGCAAGGAGGA
TATCAATGTCTAAACCCCTCCGAGGTTCTCTCTTCTCGCCATGAAGGTTC
CGACCGGTCATCCTCGAGACAGCCTTTCACTTCGCTGTCAGCTACACCCA
TTTCCATGTTCAGTCTCCTCTCACACCCAGAGCCTGAGTCGTCTCTGCCT
GGCACCCCGGCCTCTGCGTCTCCGTCTGGCCGCCTACTGGGCCAAAGTCA
CAACAAAGACATCCGTGCCGAAGTCCTGGACGGTATCAACGAAATTATCG
ATGAGTTGGGCCAGGTAGACGACCAGATTGCGGCCTACGCCCTGGAACAC
ATTCACTCCAACGAAATCATCCTGACACACACATCCTCAACTACCGTCCA
GAAATTCTTGCTCAAGGCTGCGGCCAAGCGCAAGTTCACCGTGATCCATG
CCGAATCTTATCCCAACAACCATGAAGCGACCCATGCCACTGTCAGCGGA
CAGGCCCCCAAGGACGACGACATTCTGAGCACCGAGGCTTTCCAGAAACC
TTTGATCGCCCTGGGCATCACTGTTATCCTGATCCCTGATTCCGCAGTCT
TCGCGCTCATGTCCCGTGTCAACAAGGTCATCTTGGGCACGCACTCGGTT
CTTGCCAACGGCGGATTGGTGGCTGCGGCAGGCACGCGGGTCATCGCTCG
CGCGGCCAAGGTGCACCAGACCCCCGTGGTCGTTGTGAGCGGTGTCTACA
AGCTCAGCCCTGTCTACCCATTCGATTTCGACTCGCTGATCGAGTATGGC
GATGTCAGCAAGGTTATTGGATACGAAGACGGTGACCTGGTAGACCAGAT
TGACGTGCAGAACCCGCTGTACGACTATGTCCCTGCGGAACTTGTCGATC
TTTACATCACCAACCTGCTTCTGAAACGCAGACAGATTCGCCATTCCAGA
TCATGCGCGACCGCAACCGCCTACCTCCTGCGCAGTGTTATCTCAGCTAC
TCGGACTTCGGATGCAAACAAGATGATCGAGCGGGTCCAGCATGTGGGAA
GGCGCGTGATGGCCGCTCAGCCCAGGGAAATGGTGGTCGGAAATATTGTC
AGACGTGTGCTCGGATTGATCCGTGATGAAGCGGAAGACGACAGAGAGGC
CGACTTCACTCTGAGTGAAGCGGGCTCGGAGAGCCAGCCTCAGACCCCTC
GTGCCTTGGATGATGCCGTCCACTTCCGCGGCCCTAACGCCTGGATTGGC
GTCGTTCCTCAAGTCCTTGAAGACGAATCCGATTGATACATCGATTGACG
ATCTGATCTCGGGAGGTCATGCGCCGTCTTACCTTTACCGTATTGTCTCG
GACCACTACCGCAAGGAGGATATCAATGTCTAAACCCCTCCGAGGTTCTC
TCTTCTCGCCATGAAGGTTCCGACCGGTCATCCTCGAGACAGCCTTTCAC
TTCGCTGTCAGCTACACCCATTTCCATGTTCAGTCTCCTCTCACACCCAG
AGCCTGAGTCGTCTCTGCCTGGCACCCCGGCCTCTGCGTCTCCGTCTGGC
CGCCTACTGGGCCAAAGTCACAACAAAGACATCCGTGCCGAAGTCCTGGA
CGGTATCAACGAAATTATCGATGAGTTGGGCCAGGTAGACGACCAGATTG
CGGCCTACGCCCTGGAACACATTCACTCCAACGAAATCATCCTGACACAC
ACATCCTCAACTACCGTCCAGAAATTCTTGCTCAAGGCTGCGGCCAAGCG
CAAGTTCACCGTGATCCATGCCGAATCTTATCCCAACAACCATGAAGCGA
CCCATGCCACTGTCAGCGGACAGGCCCCCAAGGACGACGACATTCTGAGC
ACCGAGGCTTTCCAGAAACCTTTGATCGCCCTGGGCATCACTGTTATCCT
GATCCCTGATTCCGCAGTCTTCGCGCTCATGTCCCGTGTCAACAAGGTCA
TCTTGGGCACGCACTCGGTTCTTGCCAACGGCGGATTGGTGGCTGCGGCA
GGCACGCGGGTCATCGCTCGCGCGGCCAAGGTGCACCAGACCCCCGTGGT
CGTTGTGAGCGGTGTCTACAAGCTCAGCCCTGTCTACCCATTCGATTTCG
ACTCGCTGATCGAGTATGGCGATGTCAGCAAGGTTATTGGATACGAAGAC
GGTGACCTGGTAGACCAGATTGACGTGCAGAACCCGCTGTACGACTATGT
CCCTGCGGAACTTGTCGATCTTTACATCACCAACCTGCTTCTGAAACGCA
GACAGATTCGCCATTCCAGATCATGCGCGACCGCAACCGCCTACCTCCTG
CGCAGTGTTATCTCAGCTACTCGGACTTCGGATGCAAACAAGATGATCGA
GCGGGTCCAGCATGTGGGAAGGCGCGTGATGGCCGCTCAGCCCAGGGAAA
TGGTGGTCGGAAATATTGTCAGACGTGTGCTCGGATTGATCCGTGATGAA
GCGGAAGACGACAGAGAGGCCGACTTCACTCTGAGTGAAGCGGGCTCGGA
GAGCCAGCCTCAGACCCCTCGTGCCTTGGATGATGCCGTCCACTTCCGCG
GCCCTAACGCCTGGATTGGCGTCGTTCCTCAAGTCCTTGAAGACGAATCC
GATTGATACATCGATTGACGATCTGATCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011868KJC3_011868Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011868-T1KJC3_011868-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011868-T1.cdsKJC3_011868-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011868-T1.utr3p1KJC3_011868-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011868-T1.exon5KJC3_011868-T1.exon5Aspergillus niger KJC3exon
KJC3_011868-T1.exon4KJC3_011868-T1.exon4Aspergillus niger KJC3exon
KJC3_011868-T1.exon3KJC3_011868-T1.exon3Aspergillus niger KJC3exon
KJC3_011868-T1.exon2KJC3_011868-T1.exon2Aspergillus niger KJC3exon
KJC3_011868-T1.exon1KJC3_011868-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011868-T1.utr5p2KJC3_011868-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011868-T1.utr5p1KJC3_011868-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR042529
DBxrefInterPro:IPR000649
DBxrefPFAM:PF01008
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1881884..1885187 -
Powered by Drupal