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KJC3_011871-T1, KJC3_011871-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011871-T1
Unique NameKJC3_011871-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1890620..1892450+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011871-T1 ID=KJC3_011871-T1|Name=KJC3_011871-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1831bp|location=Sequence derived from alignment at ch8:1890620..1892450+ (Aspergillus niger KJC3)
TTCCCCTTTTTCCCTTGCATTCTATCGGCCGGAAGACGCCATTGTTCTCC
AACCGGGCGGACCCTTCCGTCCCACGATTTTCTCCGCGATCAGCCATGGC
TGTCTTGACTCATACAAATGACATGAATAAGTGAGTAAGTCAGTCAATTA
ACTAGTTCACTAGTTAACTAGTGTAGTCGATTGTGGTGGTTCAACTGCGC
GATGTGCCATTGTTGATTTACTTTGCATACTTCTGGGCAAGTTGGAAGTT
AGATGTTGTCTCTCTACAAATGAGATCAATCAGAGCATCTCAGCGACAGC
CACAACCGGCGCAGTGACCCATACTTCGCTGTCCTTCTTCACTGCAATGC
ACATGTGGGCGATCTCGGCCAGTTTTCTCAAGTTTCATCCTGGTGATTAA
CTAGATACTCAGATGTACCATCAGTCAGCATGGTTCGCAGGGTTTTGTCC
TTTCATCAGGAATTAGTGAACACCCGGAGCAGTCCAGGGCTAAGGACTTC
ACAACAAATGATTCTTCGTCTCATAGCAGCAAAGATGAGATTTTCTTGAT
TTTTGGCCGCGCAGATGTCTGTAGGAAGGTGCAAACATATCTGTCCGGAT
CTGCTGGATAGACAATATCCTGGTTGCTTACGGCGCCCACATGCTGTCGT
GGAGGGGTGCTGTTGGTCTTCGATTCGATGCTGAGGTTCGGGGAGCCTTG
GTTCTTTCTTAAGTGGGTCTGAGCCTCCAGCTGGGCGACGACGTGCCATC
CATTCCATGCAGCTTGTCCTTGTTCTTTTTTGGATCATCGAAAGAAATAA
ATAGCTGTCCTCTTCAACGTCCCTGGCTTGGAACAATTAAGCGGGAATAC
TTCTCGGTTCACTGTTTGGAATCTCCCAAATCTTCTACCCCACTCTTTTA
CCCCTCCATCGGAACATCACAATGGCAACCCAAGAGGCCAAACCCGCAGT
GGTCTGCGTTTTGTAGGCTATCCTCCCCCCGGATACATCAGTACTCTCTC
AAAATGATAGTACTAATTCGCAACCAGCTGTGGCTCCTATCCGGGCAACT
CTACCAGCCATCTGGAAGCAGCTCGTGCGCTTGCGCAAGATTTCCACAAG
CACAATGTGCAACTGGTTTACGGTGGCGGTACCGTTGGTATCATGGGAGA
GCTCGCAAAAACCCTGGTGGCATTATCAGGACCGAAGTCGGTCCAGGGAA
TTATCCCGCAAGCTTTGGTTGAAGTCGAAGAAGGCTACAAGGCCTCGGCA
TCGGACGCGCAAAGCAAGGAAGGCAAGGCTGCTGAGCGTATTGTGAACCA
GTCCGTACAAGAATCCAACTTCGGCATGGTGACGATCGTCCCCGACATGC
ATACCCGCAAAAGATTGATGGCCCAGAAGGTCCTTGAAGGTGGTCCTGGG
TCAGGATTCGTTGCCCTTGCTGGCGGATTTGGCACCATGGAGGAACTCAT
GGAAATGACTACCTGGAACCAGCTTGGGATCCACAAGGCGGGCATTGTCC
TATTGAACATCAACGGCTACTGGAACGGAATTCTACAGTGGATCCAGACC
GCTGTCAAAGAGGGCCTGGTGAGCCCTGAGAATGCTCGTATTATTGCGGA
GGCTACGAAGGCCGAGGAGGTTCTAAAGATGTTGAGGGAGTATCAGATCA
GCAGTGACCGTATGGCGTTGAACTGGGGGCAAGAATAAGCGGCTGTTCCT
AGCCGGGTACTCAGCAATTTCTCTACCAGCGTACACGATATAACCTGGCA
CCGCGACACTCTAAACTGTATAGTCATGAGTACTAGAATCGTCGCATGGA
GGCTCCTATAATAGAACGAACCATGAATAGT
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Coding sequence (CDS) from alignment at ch8:1890620..1892450+

>KJC3_011871-T1 ID=KJC3_011871-T1|Name=KJC3_011871-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch8:1890620..1892450+ (Aspergillus niger KJC3)
ATGGCAACCCAAGAGGCCAAACCCGCAGTGGTCTGCGTTTTCTGTGGCTC
CTATCCGGGCAACTCTACCAGCCATCTGGAAGCAGCTCGTGCGCTTGCGC
AAGATTTCCACAAGCACAATGTGCAACTGGTTTACGGTGGCGGTACCGTT
GGTATCATGGGAGAGCTCGCAAAAACCCTGGTGGCATTATCAGGACCGAA
GTCGGTCCAGGGAATTATCCCGCAAGCTTTGGTTGAAGTCGAAGAAGGCT
ACAAGGCCTCGGCATCGGACGCGCAAAGCAAGGAAGGCAAGGCTGCTGAG
CGTATTGTGAACCAGTCCGTACAAGAATCCAACTTCGGCATGGTGACGAT
CGTCCCCGACATGCATACCCGCAAAAGATTGATGGCCCAGAAGGTCCTTG
AAGGTGGTCCTGGGTCAGGATTCGTTGCCCTTGCTGGCGGATTTGGCACC
ATGGAGGAACTCATGGAAATGACTACCTGGAACCAGCTTGGGATCCACAA
GGCGGGCATTGTCCTATTGAACATCAACGGCTACTGGAACGGAATTCTAC
AGTGGATCCAGACCGCTGTCAAAGAGGGCCTGGTGAGCCCTGAGAATGCT
CGTATTATTGCGGAGGCTACGAAGGCCGAGGAGGTTCTAAAGATGTTGAG
GGAGTATCAGATCAGCAGTGACCGTATGGCGTTGAACTGGGGGCAAGAAT
AAATGGCAACCCAAGAGGCCAAACCCGCAGTGGTCTGCGTTTTCTGTGGC
TCCTATCCGGGCAACTCTACCAGCCATCTGGAAGCAGCTCGTGCGCTTGC
GCAAGATTTCCACAAGCACAATGTGCAACTGGTTTACGGTGGCGGTACCG
TTGGTATCATGGGAGAGCTCGCAAAAACCCTGGTGGCATTATCAGGACCG
AAGTCGGTCCAGGGAATTATCCCGCAAGCTTTGGTTGAAGTCGAAGAAGG
CTACAAGGCCTCGGCATCGGACGCGCAAAGCAAGGAAGGCAAGGCTGCTG
AGCGTATTGTGAACCAGTCCGTACAAGAATCCAACTTCGGCATGGTGACG
ATCGTCCCCGACATGCATACCCGCAAAAGATTGATGGCCCAGAAGGTCCT
TGAAGGTGGTCCTGGGTCAGGATTCGTTGCCCTTGCTGGCGGATTTGGCA
CCATGGAGGAACTCATGGAAATGACTACCTGGAACCAGCTTGGGATCCAC
AAGGCGGGCATTGTCCTATTGAACATCAACGGCTACTGGAACGGAATTCT
ACAGTGGATCCAGACCGCTGTCAAAGAGGGCCTGGTGAGCCCTGAGAATG
CTCGTATTATTGCGGAGGCTACGAAGGCCGAGGAGGTTCTAAAGATGTTG
AGGGAGTATCAGATCAGCAGTGACCGTATGGCGTTGAACTGGGGGCAAGA
ATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011871KJC3_011871Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011871-T1KJC3_011871-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011871-T1.utr5p1KJC3_011871-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011871-T1.utr5p2KJC3_011871-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011871-T1.exon1KJC3_011871-T1.exon1Aspergillus niger KJC3exon
KJC3_011871-T1.exon2KJC3_011871-T1.exon2Aspergillus niger KJC3exon
KJC3_011871-T1.exon3KJC3_011871-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011871-T1.cdsKJC3_011871-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011871-T1.utr3p1KJC3_011871-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR031100
DBxrefInterPro:IPR005269
DBxrefPFAM:PF03641
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1890620..1892450 +
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