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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1931615..1933885+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011888-T1 ID=KJC3_011888-T1|Name=KJC3_011888-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2271bp|location=Sequence derived from alignment at ch8:1931615..1933885+ (Aspergillus niger KJC3)
TTCAGGAGCCACTCGCCAAGAGCCACTAGCAATGACCCTCATAGGGCCTG
GAATTAAAAGTCACTGCCTATTCTGGCGTTTCGGCACAACCAACTCTGTT
TCTGTCTGTGACTGTTTGGCCAAGACTGGCTCAAACAACGTCATCGACAG
GTGAGCCCCACTCTTGGTGTCTTTTTCAATTCTGGCTGCCTGGGCTGAGG
AGACAATACGATTGGCCGGAAGGATTGAGAGGATTTTCCATGCGGGCGAT
CTGCCAGTGAAATCCAGGCTAAGATCGGCTGCTGGCCAGCTTCGAGCTTT
CCTCTCCGGGACAGCGGGGCGGACAGTCAGGGGGGGTTGGCAACCAATGG
CTGCCGGGATCGGCCCCCCCTAAAGTAAAGCCAGTACCCTGAAGGCGGGA
AACCCTGCGTGGTAACAATACCTTACCTACCTTACCTACCTAAAAATACC
TTACCAGCCCAGCATCCATGGTTGACTTCATCGTAAGACATCATTCCGCG
CCCGGTGATTTTTCGGTTTCTTCAGGGTCTTGATCCATCTGGTGGCTTAT
CTGGTGCATCTGATCGCATCGTGTGGTCCTCCTCGGACAGATACACCGCT
GTATATATATCCAAAACTTCCGAGCCTCCGCAGACCGGCCTCTTGACTCC
AGACCACCTCTTGTCATGCGGTTGATCGCTCACCTTCTGCCGCTCCTGGC
AGTGGGCGTTTGGCCTTCTCTGGCAAAGGATGATAGCACCACCACCACCA
CGACTACCGGCAACAATGGCGGCCTGACTCTCGAGGGGACCGTCACGTCG
TCCATCAGTGAAGCGACGCTGCCCACAGGTCACTACCTCTCCTACACTAC
CACTATGACTCTCGACGATGGACATACTGTCACGAGCACCGGGGCGCACT
CCGCGACAACCACTTCCAACTCTACAACAACATCCGGCAATTTCACCACG
ACGGTGACTTCTTCGTCGCAGTCCCTCACATTGCTGGTGGGCGGACAGAC
CGGCGGGGTCAATGGCACCAACGCTACCACAACAGCGACGTCGACCGCAT
CGTCGACCCCGGTCGTCAACACACAGCCTTGCAATGGCCACGCGGAGTTT
TGCGCTCGCAAGTATTCCAACATCACCATGGTTGCTGCCCACAACAGTCC
GTTTGTCAAGCCAGGCAATGCGGCAGCCAACCAGGCGTTGAAGGTTACCG
CTCAGCTGGACGATGGAATTCGGATGCGTAAGTTGTCCGATCGACGAAGC
TTAGCTCGCGGGTTGAAATCTTGCTGACACCCCGGACAGTGCAATTTCAA
ACGCACCTGGTCAACAACACCCTCTACCTCTGTCACACCAGCTGCGATCT
TCTGAACATGGGCCCTCTGGAAGACTATCTGACGACGGTCACGAAGTGGG
TCAAAACCCATCCATATGACGTGGTCACCATCTTGATAGGCAATTATGAC
TATGTTGACCCCGGCAACTTCACGGGTCCGATGCAAAACTCTGGGCTCAT
GGACTATGTGTTCACCCCCTCGAAGATCCCCATGGCGCTGGACGATTGGC
CTACGATGTCCAGTATGATTCTCTCTGGCAAGAGAGCCGTCGTCTTCATG
GACTACCAGGCCAATCAGACGGCCTACCCGTGGCTCATGGACGAGTTTTC
GCAGATGTGGGAGACGCCGTTTTCGCCTACAGACGCGGCTTTCCCTTGCA
CGGAGCAACGCCCGCCCGACTTGTCCGCGCAGGATGCCAAAGACAGGATG
TACATGGCCAACCACAACCTGAATCTCGACATCAACATTGCCAGCATTAG
TCTGCTGATCCCCAACACGGCCTCGCTCAACCAGACCAACGCGGTCTCCG
GCTACGGTAGTCTGGGAAAGATGGCCCGCAACTGCACGGGTAAGTAACAG
CTGACTGTGATCTGTGTAACAAGCTAATATATTTGCCTCTTAGCTATGTG
GGACCGGCCGCCTAACTTCCTTCTCGTGGATTACTATAATTACGGCAACA
TCAACGGCTCCGTGTTCGAGGTGGCGGCGGAGATGAACAACGTGACCTGG
GATGGGAAATGCTGCGGCGCAGCATCTGCAGCGTCGAGCGTGATGCCTGG
AGTGAGCGTGATGAGTACGCTGCTCCTGATTGCGGGTGTGCAGTATATGG
CATCGATATTCTAGTGTTGTTCCGAGCGTATATAGTGGGTGTTCGGAGTT
GATGGACTAACTTATATTATGATTGACGACTGTACAGTTAGAAATGGAAC
CCAATTCCTTACTAAAGTCAT back to topCoding sequence (CDS) from alignment at ch8:1931615..1933885+ >KJC3_011888-T1 ID=KJC3_011888-T1|Name=KJC3_011888-T1|organism=Aspergillus niger KJC3|type=CDS|length=4149bp|location=Sequence derived from alignment at ch8:1931615..1933885+ (Aspergillus niger KJC3)
ATGCGGTTGATCGCTCACCTTCTGCCGCTCCTGGCAGTGGGCGTTTGGCC
TTCTCTGGCAAAGGATGATAGCACCACCACCACCACGACTACCGGCAACA
ATGGCGGCCTGACTCTCGAGGGGACCGTCACGTCGTCCATCAGTGAAGCG
ACGCTGCCCACAGGTCACTACCTCTCCTACACTACCACTATGACTCTCGA
CGATGGACATACTGTCACGAGCACCGGGGCGCACTCCGCGACAACCACTT
CCAACTCTACAACAACATCCGGCAATTTCACCACGACGGTGACTTCTTCG
TCGCAGTCCCTCACATTGCTGGTGGGCGGACAGACCGGCGGGGTCAATGG
CACCAACGCTACCACAACAGCGACGTCGACCGCATCGTCGACCCCGGTCG
TCAACACACAGCCTTGCAATGGCCACGCGGAGTTTTGCGCTCGCAAGTAT
TCCAACATCACCATGGTTGCTGCCCACAACAGTCCGTTTGTCAAGCCAGG
CAATGCGGCAGCCAACCAGGCGTTGAAGGTTACCGCTCAGCTGGACGATG
GAATTCGGATGCTGCAATTTCAAACGCACCTGGTCAACAACACCCTCTAC
CTCTGTCACACCAGCTGCGATCTTCTGAACATGGGCCCTCTGGAAGACTA
TCTGACGACGGTCACGAAGTGGGTCAAAACCCATCCATATGACGTGGTCA
CCATCTTGATAGGCAATTATGACTATGTTGACCCCGGCAACTTCACGGGT
CCGATGCAAAACTCTGGGCTCATGGACTATGTGTTCACCCCCTCGAAGAT
CCCCATGGCGCTGGACGATTGGCCTACGATGTCCAGTATGATTCTCTCTG
GCAAGAGAGCCGTCGTCTTCATGGACTACCAGGCCAATCAGACGGCCTAC
CCGTGGCTCATGGACGAGTTTTCGCAGATGTGGGAGACGCCGTTTTCGCC
TACAGACGCGGCTTTCCCTTGCACGGAGCAACGCCCGCCCGACTTGTCCG
CGCAGGATGCCAAAGACAGGATGTACATGGCCAACCACAACCTGAATCTC
GACATCAACATTGCCAGCATTAGTCTGCTGATCCCCAACACGGCCTCGCT
CAACCAGACCAACGCGGTCTCCGGCTACGGTAGTCTGGGAAAGATGGCCC
GCAACTGCACGGCTATGTGGGACCGGCCGCCTAACTTCCTTCTCGTGGAT
TACTATAATTACGGCAACATCAACGGCTCCGTGTTCGAGGTGGCGGCGGA
GATGAACAACGTGACCTGGGATGGGAAATGCTGCGGCGCAGCATCTGCAG
CGTCGAGCGTGATGCCTGGAGTGAGCGTGATGAGTACGCTGCTCCTGATT
GCGGGTGTGCAGTATATGGCATCGATATTCTAGATGCGGTTGATCGCTCA
CCTTCTGCCGCTCCTGGCAGTGGGCGTTTGGCCTTCTCTGGCAAAGGATG
ATAGCACCACCACCACCACGACTACCGGCAACAATGGCGGCCTGACTCTC
GAGGGGACCGTCACGTCGTCCATCAGTGAAGCGACGCTGCCCACAGGTCA
CTACCTCTCCTACACTACCACTATGACTCTCGACGATGGACATACTGTCA
CGAGCACCGGGGCGCACTCCGCGACAACCACTTCCAACTCTACAACAACA
TCCGGCAATTTCACCACGACGGTGACTTCTTCGTCGCAGTCCCTCACATT
GCTGGTGGGCGGACAGACCGGCGGGGTCAATGGCACCAACGCTACCACAA
CAGCGACGTCGACCGCATCGTCGACCCCGGTCGTCAACACACAGCCTTGC
AATGGCCACGCGGAGTTTTGCGCTCGCAAGTATTCCAACATCACCATGGT
TGCTGCCCACAACAGTCCGTTTGTCAAGCCAGGCAATGCGGCAGCCAACC
AGGCGTTGAAGGTTACCGCTCAGCTGGACGATGGAATTCGGATGCTGCAA
TTTCAAACGCACCTGGTCAACAACACCCTCTACCTCTGTCACACCAGCTG
CGATCTTCTGAACATGGGCCCTCTGGAAGACTATCTGACGACGGTCACGA
AGTGGGTCAAAACCCATCCATATGACGTGGTCACCATCTTGATAGGCAAT
TATGACTATGTTGACCCCGGCAACTTCACGGGTCCGATGCAAAACTCTGG
GCTCATGGACTATGTGTTCACCCCCTCGAAGATCCCCATGGCGCTGGACG
ATTGGCCTACGATGTCCAGTATGATTCTCTCTGGCAAGAGAGCCGTCGTC
TTCATGGACTACCAGGCCAATCAGACGGCCTACCCGTGGCTCATGGACGA
GTTTTCGCAGATGTGGGAGACGCCGTTTTCGCCTACAGACGCGGCTTTCC
CTTGCACGGAGCAACGCCCGCCCGACTTGTCCGCGCAGGATGCCAAAGAC
AGGATGTACATGGCCAACCACAACCTGAATCTCGACATCAACATTGCCAG
CATTAGTCTGCTGATCCCCAACACGGCCTCGCTCAACCAGACCAACGCGG
TCTCCGGCTACGGTAGTCTGGGAAAGATGGCCCGCAACTGCACGGCTATG
TGGGACCGGCCGCCTAACTTCCTTCTCGTGGATTACTATAATTACGGCAA
CATCAACGGCTCCGTGTTCGAGGTGGCGGCGGAGATGAACAACGTGACCT
GGGATGGGAAATGCTGCGGCGCAGCATCTGCAGCGTCGAGCGTGATGCCT
GGAGTGAGCGTGATGAGTACGCTGCTCCTGATTGCGGGTGTGCAGTATAT
GGCATCGATATTCTAGATGCGGTTGATCGCTCACCTTCTGCCGCTCCTGG
CAGTGGGCGTTTGGCCTTCTCTGGCAAAGGATGATAGCACCACCACCACC
ACGACTACCGGCAACAATGGCGGCCTGACTCTCGAGGGGACCGTCACGTC
GTCCATCAGTGAAGCGACGCTGCCCACAGGTCACTACCTCTCCTACACTA
CCACTATGACTCTCGACGATGGACATACTGTCACGAGCACCGGGGCGCAC
TCCGCGACAACCACTTCCAACTCTACAACAACATCCGGCAATTTCACCAC
GACGGTGACTTCTTCGTCGCAGTCCCTCACATTGCTGGTGGGCGGACAGA
CCGGCGGGGTCAATGGCACCAACGCTACCACAACAGCGACGTCGACCGCA
TCGTCGACCCCGGTCGTCAACACACAGCCTTGCAATGGCCACGCGGAGTT
TTGCGCTCGCAAGTATTCCAACATCACCATGGTTGCTGCCCACAACAGTC
CGTTTGTCAAGCCAGGCAATGCGGCAGCCAACCAGGCGTTGAAGGTTACC
GCTCAGCTGGACGATGGAATTCGGATGCTGCAATTTCAAACGCACCTGGT
CAACAACACCCTCTACCTCTGTCACACCAGCTGCGATCTTCTGAACATGG
GCCCTCTGGAAGACTATCTGACGACGGTCACGAAGTGGGTCAAAACCCAT
CCATATGACGTGGTCACCATCTTGATAGGCAATTATGACTATGTTGACCC
CGGCAACTTCACGGGTCCGATGCAAAACTCTGGGCTCATGGACTATGTGT
TCACCCCCTCGAAGATCCCCATGGCGCTGGACGATTGGCCTACGATGTCC
AGTATGATTCTCTCTGGCAAGAGAGCCGTCGTCTTCATGGACTACCAGGC
CAATCAGACGGCCTACCCGTGGCTCATGGACGAGTTTTCGCAGATGTGGG
AGACGCCGTTTTCGCCTACAGACGCGGCTTTCCCTTGCACGGAGCAACGC
CCGCCCGACTTGTCCGCGCAGGATGCCAAAGACAGGATGTACATGGCCAA
CCACAACCTGAATCTCGACATCAACATTGCCAGCATTAGTCTGCTGATCC
CCAACACGGCCTCGCTCAACCAGACCAACGCGGTCTCCGGCTACGGTAGT
CTGGGAAAGATGGCCCGCAACTGCACGGCTATGTGGGACCGGCCGCCTAA
CTTCCTTCTCGTGGATTACTATAATTACGGCAACATCAACGGCTCCGTGT
TCGAGGTGGCGGCGGAGATGAACAACGTGACCTGGGATGGGAAATGCTGC
GGCGCAGCATCTGCAGCGTCGAGCGTGATGCCTGGAGTGAGCGTGATGAG
TACGCTGCTCCTGATTGCGGGTGTGCAGTATATGGCATCGATATTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008081 | phosphoric diester hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011888-T1.utr3p1 | KJC3_011888-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR017946 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1931615..1933885 + |
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