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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1967861..1971004+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011899-T1 ID=KJC3_011899-T1|Name=KJC3_011899-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3144bp|location=Sequence derived from alignment at ch8:1967861..1971004+ (Aspergillus niger KJC3)
ATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAG
GGCCCGGAGGGTAAAGTGTGATGGTATTATAGTTTCCTCTTGGTTTGAAA
AGCTAGTGTAAGCTAACACATTAGCAAAGAGACCCACCCCGTCTGCCGTC
GCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGG
CTTGATGAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATG
GTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAGTCTGG
AGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTT
CTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAAC
GGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACTATCAC
CCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGAC
CAAATGCTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCT
GGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGG
CCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAAT
ACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACCA
TCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAGTTGGT
CGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGG
TTTGAGGTATTGAAGCCTTTTCACCATAATACAGCCAATTAGTTGTGAGA
ATTGACACCATTAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACAC
CTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAA
AACATCATCGCAGCACAGTCAGGAGCTTCTTGGTTTTTTCGACCGCTACT
TTGCTTTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCA
CGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAAT
TATTGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAATG
AAGTGACTGACTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTG
TATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGG
GGATATTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAA
ACCGCTTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAA
TCAATTTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGT
TCGGCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAACATGATGCGCA
CTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCG
GACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGC
CATTCGTCGGTTTGGCGTACGTCTGTCCACCCATATATACCATGTCACAA
GCTAATGATTTAGAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCT
GGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCA
GGGAAGACAGCGCGCTTTGAATGGGAACATGCGATGACGATGCTTGGAGG
GTTGAAGCTAGCGCTAACATAGATTCATTCATTCTAGCATGCAATACCTG
CTTTATCTCGATGATTATTACAACCTCGGACCACTCTCACGTGTTTTACG
CCCCTTCCATCCTGTCAGGTCACTCAACTCCAACTCCGGATCCTGATGGG
CGAGATTCTTCGCGGTCACCGTCTGGCCTGCGCGCCATTGCCACTGCCGG
GCAATGTCAGGCTCTAACGATCCTTCCAGCAAGTCGGCAATGTACTTGCC
CAGCACGGGCAGAAATTTAAAACCATGCGCTGATCCTCCGGCCGTCAAGT
ACAGCCCTTGATGAACAGGATGCGGTGAAATCAGAAAATGGCGGTCAGCG
GTATCAGCGTCCCAGCAAAGACGAGTATAACAGAAGGGACGGTCGGCGAG
TTCTGGTAGAACACGACGAAGGTTTCGGCGCATCTGAGCTTCAATCTCCA
GCGGGAGATCATCTTCTGGATTCTCTACAAAGGTGTGGGGAACAGACGAC
TTGTTTCCGGACCGTGTATCCGTCTGCATGTTTGTGATGAACTGGCTGTG
CGCCATCTTAAACACCCCATCTGCCTGCGGCGGGAAAAAGTAGCCCAGCT
CCAGATTATCCATGATAGGCAATGTGGAATAGTGAGTTGTTTCCGCGGGG
GAGAGCTGGATGTGCGCCACGCTGTGGCCCTTGGCCGTCAACTGGCCCGC
CACGTCCAGCAATGTTGGCGTCCAAGCCCCGGCAGCCACCACGACCAAGT
CAGCGACATGCGTGGAGCCATCCGCCGTGATCACTCCCGTGCAACGCTTC
TTATCATCGAACAACAGCCTCTTGACCCAGCCCTCTTCTCCAGATACATA
CTCAACCCCTTGCTCCTGCGCCGCGACAGCCATGCGTCGCAAGGCCTCCC
CGGCCGCCGCCCAGCCAGCCGTTGGATTCCAGACGTTAATATTCCACCCA
TCCAATTCACCCGTTACAAGGGGGAATCGCTCCCGGATCTGCTGCGTCGA
CAGGCGCTCCAATCCCTCCACCCCGAGCTTGGTGCACGTCTCAATTGACC
CTTCGACAAACGCACACGATAGCTTATATGCGCTCAGAATCCAGCCAGGG
ACATGATACAGCCCACGGAACAAGTCCCAAGACTTCCAGGCGGCAATCGC
CTCAATCCCTAACCGTGCATACAGCGGCTCGTTGTAGTCGCTGCGAATGA
TCTTGCTAATATCGGTGGAGGCGGCCTCGCAGGACGGCGCAGGATATCGA
TCCAGCACGCGGATGGACGTGAAGCCGCGCTGGGCGAGATGATAAGCGGT
TGAGGTGCCGAAGCAGCCAGCTCCGACGATGAGAATTCGTGTATTTCGGT
CCATTGTAGAGGTTCAAATTCAGTTTAATCCAGTTCAAGTATGA back to topCoding sequence (CDS) from alignment at ch8:1967861..1971004+ >KJC3_011899-T1 ID=KJC3_011899-T1|Name=KJC3_011899-T1|organism=Aspergillus niger KJC3|type=CDS|length=6444bp|location=Sequence derived from alignment at ch8:1967861..1971004+ (Aspergillus niger KJC3)
ATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAG
GGCCCGGAGGGTAAAGTGTGATGAGACCCACCCCGTCTGCCGTCGCTGCG
CGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGAT
GAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATGGTCGAA
GAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAGTCTGGAGATGG
TGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTTCTAAAC
ACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAACGGTATA
TGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACTATCACCCGCAT
TGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGACCAAATG
CTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCTGGTCGA
CAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGGCCCTCA
ACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAATACCCTG
CGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACCATCATCG
TGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAGTTGGTCGAATT
GGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAG
ATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTTAACGGGTTCCA
GGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAACATCATCGCAGC
ACAGTCAGGAGCTTCTTGGTTTTTTCGACCGCTACTTTGCTTTCCACCTC
GTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCGTG
TCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTATTGACCCTTATA
TGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTG
GCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAGCA
CTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGATATTAACTTAC
ACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCA
ATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCAATTTCTTCATG
TTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCG
ATCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTGCCGTCCTCCCT
CTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAG
AGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTG
GCAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCTGGCGACGCCGT
GACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGC
GCGCTTTGAATGGGAACATGCGATGACGATGCTTGGAGGGTTGAAGCTAG
CGCTAACATAGATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGC
TGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGAGACCCACCCCGTCTG
CCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGA
CTTGGCTTGATGAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGA
GTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAG
TCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGA
TGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTAC
CAAACGGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACT
ATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAG
AGGACCAAATGCTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCA
ACCCTGGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCC
CATGGCCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCG
CAAATACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAG
CACCATCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAG
TTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCT
GTTGGTTTGAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTT
AACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAAC
ATCATCGCAGCACAGTCAGGAGCTTCTTGGTTTTTTCGACCGCTACTTTG
CTTTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGA
ACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTAT
TGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAG
TGACTGACTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTAT
GGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGA
TATTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACC
GCTTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCA
ATTTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGTTCG
GCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTG
CCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGAC
GACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCAT
TCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCT
GGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCA
GGGAAGACAGCGCGCTTTGAATGGGAACATGCGATGACGATGCTTGGAGG
GTTGAAGCTAGCGCTAACATAGATGGCGCCCTTGACCATCTCCCGCACCC
GGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGAGACC
CACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATACAG
CTTGCAGTTGACTTGGCTTGATGAATCAATCGCCAAGGGCGTGTGTCATG
GGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCA
AATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCGCA
CCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCTCT
GTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAACGA
CGGCTGATACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAA
TCGATCCAGAGAGGACCAAATGCTACTGGCATTCTTTGAGGCAGTCATTT
GCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGATAC
TTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTATCATGCGGCGTT
GGCGATCTCCGCAAATACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCC
CTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTCTA
GATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTTGT
TTTGATGCTCTGTTGGTTTGAGATCTCAGATCATAGTCGTTCATCGTGGG
TGACACACCTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGA
CATTGGAAAACATCATCGCAGCACAGTCAGGAGCTTCTTGGTTTTTTCGA
CCGCTACTTTGCTTTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGG
ATGGGCCACGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCC
TCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTT
AATAAATGAAGTGACTGACTTGGCATGGCAAGAACATGAGCTGGACATTC
AGAAGGTGTATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCA
CCTCATGGGGATATTAACTTACACTCAGGACAGGAATGTATGGTCATTGC
TGAAGCAAACCGCTTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGT
CTTCTGAATCAATTTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTC
CGCTATGTTCGGCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAACAT
GATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCT
GTGTCTCGGACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAG
TGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTGAT
AGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACG
GCGCCATGTCAGGGAAGACAGCGCGCTTTGAATGGGAACATGCGATGACG
ATGCTTGGAGGGTTGAAGCTAGCGCTAACATAGATGGCGCCCTTGACCAT
CTCCCGCACCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGT
GTGATGAGACCCACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGGTGC
TGCGAATACAGCTTGCAGTTGACTTGGCTTGATGAATCAATCGCCAAGGG
CGTGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAA
AGGATGTCTCAAATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCT
AAGGCGTCGCACCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGT
GAACCGGCTCTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCA
GTCATCAACGACGGCTGATACTATCACCCGCATTGAATACAATGCCAGCC
ACGGCCTCGAATCGATCCAGAGAGGACCAAATGCTACTGGCATTCTTTGA
GGCAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATC
CATATCGATACTTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTAT
CATGCGGCGTTGGCGATCTCCGCAAATACCCTGCGTCTTTCCAAAGTACA
GTATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCC
AATCTCTTCTAGATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATC
TTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAGATCTCAGATCATAGTCG
TTCATCGTGGGTGACACACCTTAACGGGTTCCAGGATGTCATGTCTGCAC
GAAAGCAACGACATTGGAAAACATCATCGCAGCACAGTCAGGAGCTTCTT
GGTTTTTTCGACCGCTACTTTGCTTTCCACCTCGTTCTTGCTCGAACGGC
CTTTCGATGGGATGGGCCACGAACACACCCGTGTCTTTCTGCCTTGCCTT
CAAGTCCATCCTCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCA
CTACTTCTCTTAATAAATGAAGTGACTGACTTGGCATGGCAAGAACATGA
GCTGGACATTCAGAAGGTGTATGGGCTGAAGCACTCATTGGAGGTGCTCC
GTCAGACGCCACCTCATGGGGATATTAACTTACACTCAGGACAGGAATGT
ATGGTCATTGCTGAAGCAAACCGCTTGGGTGCAATACTGCTCCTGTACGA
GATATGCTCGTCTTCTGAATCAATTTCTTCATGTTCATCATTTAGCTCGG
AGGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTCAGGCGCAC
AAGTCCAACATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCT
AGCAGGTTGCTGTGTCTCGGACGACAACGACAGAGTCATTGTTCTGCAAA
TCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGGCA
AGAGAAGTGATAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGA
ATTTGCCAACGGCGCCATGTCAGGGAAGACAGCGCGCTTTGAATGGGAAC
ATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011899-T1.utr3p1 | KJC3_011899-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1967861..1971004 + |
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