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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2002541..2003878- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011911-T1 ID=KJC3_011911-T1|Name=KJC3_011911-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1338bp|location=Sequence derived from alignment at ch8:2002541..2003878- (Aspergillus niger KJC3)
ATGTCGTCTACTCAGATATCAGTTACACTCACCTCTCACTCTAGCGACTT
GCTCAAACCAGTTATGTCTGTCCTGAAGAGACATGATGGATCTGAGTACT
ACGTCTATGAACGCAAAGACTGCTGGCATATTGGTCTTGGATCCTACAGA
TCCTTGATAGTTGACTCCAGCGGGGAGAACATGACAATTTCAGCGTCCGG
GGAACCAAGTCGTCACTGCCTGGTGAAGAAGCCCCTATCTGATCTAGCAA
GAGAATTTCTCCGTGATAATTGGAATCACACCTCCAAAGTCTGCGGGCAC
GTTGGATTCAACTATGCCGCTCATATCCGGGGCCTGAATTATACCCCCGG
CAAATGGCCCCTACTCGCCTTGATGATACCTTGCATAGAAGTACTCATCG
AGTCAGATAGAATAATAGTCACCGGGCATGACACCAAAGAGGTCCTGGAA
CTGTGCACACAGCTGAAAAATACATGCCGGTGCCGCAACCTACCACCTAC
CACTCATGATATCCAACCCGTTGACGTTAATTATAACTCGAGCCAATACA
AAACCCTAGTACAGAAAGCGTTGTCAGAAATTCAGCAGGGCCACTACACC
AAGATAATTCCGTCTCGGCCAGTTAACCTCCCAGAACGTGTGGACATGCC
TTCAACACTGCACAGTGGTCGACAATCTAATACCCCCTCACGCAGCTTCT
CCTTCCGACATGCTGGCTACCAAGCCACTGGATTCAGTCCCGAACTAGTC
ATGTCCCTGGACAAAGGGGTAGTAACAACAGAGCCTCTGGCCGGCACACG
CTCATGCAAAGGCACGAAGGCAGAAATCCAGAGACTTCGACATGAGCTAG
AAAACGACAGCAAAGAGATCGTCGAGCACGTCATCTCCGTCAAAGAGGCC
GTGCACGAAGTCAGCCAGCTTTCCGATAAGCCGGTGGTAGAGGACTTCAT
GTCCGTGCGAGTACGAGGGAGCGTGCAACACCTTGGTTCTCGAGTATGCG
GACGTCTATCTCCAGATAAAGACATGTGGGATGCTTTCAATGTCCTCTTC
CCGTCGATAACTGCGTCAGGTATTCCGAAACAGGCTGCTATTGATGCTAT
TTCCCGCCTTGAGTCGCAGCCTAGAGAGCTTTATTCGGGAGCTATTCTGA
TGATCGAAGATAATCAGTCCATGGAGGCTGCGCTTGTGCTTCGCTCTGTT
TATCAGGATTCCGAGCGCCAGCGGATCCAGGCTGGTGCTGGAGTAATTGC
GGAGTCGGATCCGTCCCGAGAATTGACTGAGACTTGTGAGAAACTTGCGA
GTATTGCGCCTTTTGTTGTGAGGGAATCTGGTATGTAA back to topCoding sequence (CDS) from alignment at ch8:2002541..2003878- >KJC3_011911-T1 ID=KJC3_011911-T1|Name=KJC3_011911-T1|organism=Aspergillus niger KJC3|type=CDS|length=1338bp|location=Sequence derived from alignment at ch8:2002541..2003878- (Aspergillus niger KJC3)
ATGTCGTCTACTCAGATATCAGTTACACTCACCTCTCACTCTAGCGACTT
GCTCAAACCAGTTATGTCTGTCCTGAAGAGACATGATGGATCTGAGTACT
ACGTCTATGAACGCAAAGACTGCTGGCATATTGGTCTTGGATCCTACAGA
TCCTTGATAGTTGACTCCAGCGGGGAGAACATGACAATTTCAGCGTCCGG
GGAACCAAGTCGTCACTGCCTGGTGAAGAAGCCCCTATCTGATCTAGCAA
GAGAATTTCTCCGTGATAATTGGAATCACACCTCCAAAGTCTGCGGGCAC
GTTGGATTCAACTATGCCGCTCATATCCGGGGCCTGAATTATACCCCCGG
CAAATGGCCCCTACTCGCCTTGATGATACCTTGCATAGAAGTACTCATCG
AGTCAGATAGAATAATAGTCACCGGGCATGACACCAAAGAGGTCCTGGAA
CTGTGCACACAGCTGAAAAATACATGCCGGTGCCGCAACCTACCACCTAC
CACTCATGATATCCAACCCGTTGACGTTAATTATAACTCGAGCCAATACA
AAACCCTAGTACAGAAAGCGTTGTCAGAAATTCAGCAGGGCCACTACACC
AAGATAATTCCGTCTCGGCCAGTTAACCTCCCAGAACGTGTGGACATGCC
TTCAACACTGCACAGTGGTCGACAATCTAATACCCCCTCACGCAGCTTCT
CCTTCCGACATGCTGGCTACCAAGCCACTGGATTCAGTCCCGAACTAGTC
ATGTCCCTGGACAAAGGGGTAGTAACAACAGAGCCTCTGGCCGGCACACG
CTCATGCAAAGGCACGAAGGCAGAAATCCAGAGACTTCGACATGAGCTAG
AAAACGACAGCAAAGAGATCGTCGAGCACGTCATCTCCGTCAAAGAGGCC
GTGCACGAAGTCAGCCAGCTTTCCGATAAGCCGGTGGTAGAGGACTTCAT
GTCCGTGCGAGTACGAGGGAGCGTGCAACACCTTGGTTCTCGAGTATGCG
GACGTCTATCTCCAGATAAAGACATGTGGGATGCTTTCAATGTCCTCTTC
CCGTCGATAACTGCGTCAGGTATTCCGAAACAGGCTGCTATTGATGCTAT
TTCCCGCCTTGAGTCGCAGCCTAGAGAGCTTTATTCGGGAGCTATTCTGA
TGATCGAAGATAATCAGTCCATGGAGGCTGCGCTTGTGCTTCGCTCTGTT
TATCAGGATTCCGAGCGCCAGCGGATCCAGGCTGGTGCTGGAGTAATTGC
GGAGTCGGATCCGTCCCGAGAATTGACTGAGACTTGTGAGAAACTTGCGA
GTATTGCGCCTTTTGTTGTGAGGGAATCTGGTATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008909 | isochorismate synthase activity |
| GO:0016833 | oxo-acid-lyase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019996 |
| DBxref | InterPro:IPR005801 |
| DBxref | InterPro:IPR015890 |
| DBxref | PFAM:PF00425 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2002541..2003878 - |
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