You are here

Home

KJC3_011944-T1, KJC3_011944-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011944-T1
Unique NameKJC3_011944-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2082737..2084836+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011944-T1 ID=KJC3_011944-T1|Name=KJC3_011944-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2100bp|location=Sequence derived from alignment at ch8:2082737..2084836+ (Aspergillus niger KJC3)
CCCAAGGCTAAACCACCCTCATTATCGCCCGTGAACACCGCATCTGCTTT
TCTTCCGGAGACGTGTCTATTGGATGTTTTAAAGAGGATTGTTTCAACTG
TACAGTTCTGGGGGCTCTCCTGCACTGGAGTTGTCCGACCGGCTCTCTCA
GCAACTGCTACAGGCCAAGCACGAATACTAGTCTTTCTTAATTACATTCT
CCTCGGTGGAGTCTACTAGTGGGAAGCAACCATGGAGGACTTCAACAGCG
AAACCGACAGTGACTACACTAGCTACTGGAGAGATTGGGTGAGTCTACCA
ATCCCTACGTGAGTTTCTGTGCTGGACAGGGACGACGGCGGCTTTGCAAG
TGAAGGGAGATGCGTGGCTGCGCGCCTGCTTTCAACGATGTCGTTGCGGC
TGGTGAGAGATCAGGAGTCAGAATAACACGGTCTCATGCGTTGAATTCTT
CTCTGCTGCAATGCTTTTGCTCAGCTTCTCGGATTTCAACTGCGCACCTG
CTTCTGCTCCCTCACTTCTAAGCAATGATGGCTTTACCTACTAGTTTTGC
TAGTGAGGAGTCAGGCTCGTCACTTGCTACGCTACGCCCTTCCATCGAAG
CTCGACCTCGTCCCCGGCCGGAAGTACATATGCGCTCTTCGTCTAGTTTT
TCATACGGCGTGATACTGCCGCAGAAACATACTGACTATATTCATCAGTT
CATCTCCTCTCGTGGAAACGAATACTTCTGCGAGATCGACGAAGATTACT
TGACCGATCGCTTCAACCTCACTGGCCTGAACACCGAGGTCGCTTACTAT
CAGTATGCCTTGGACCTTGTGACGGACGTGTTTGACCTCGACGCGGACGA
CGACCTGCGCGAGCAAATCGAAAAGTCGGCGCGTCACCTCTATGGTCTGG
TCCATGCCAGATACATTGTCACAACCCGCGGTCTTGCCAAGATGGTACGT
CTTACACTAGGGGGTTTGTGAATGGTATGTGAAGGGATTTCTGACAGGCA
ATCTAGGTCGAGAAGTACAAGCGCTGCGATTTCGGCAAATGCCCCCGTGT
CATGTGTGACGGACACCCCCTCCTGCCTATGGGCCAGCACGACGTTGCCA
ACCAGAGCACTGTTCGCCTGTACTGCCCCAAGTGCGAGGACATCTACAAC
CCCAAGTCATCCCGTCATGCTTCCATCGACGGCGCTTACTTCGGCACGTC
GTTCCATAGCATGCTCTTCCAGGTGTATCCTGCTTTGCTTCCCGAGAAGA
GCATTCGCCGCTATGAGCCCCGCGTCTTCGGTTTCAAGGTGCACGCCATG
GCGGCCCTTGCGCGCTGGCAGGATATCTTCCGGGAGGAGACGAAGGCGTC
CCTTCGCGAAGCCGGTGTGGAAGCCAAATACATCGAAGATGACAGTGAGG
AGGAAGAGCTAGATGACGACGACGAACCTATCTCTGAGACCAAAGAAGAG
AGAGTCGCCGGCGATGCCGCCTCTGGCCGTATGGATCTTGGCAACTGATT
GACGCTCCCTGCATGATATTCTGCTTCATCGGAGTTACCTCATTTTCCTA
CCATATCCACCTGGCATGGGCGCAACATCATGAACTTGCATTTAAATGCG
CGTCTGAGTCGTTTTTCTCCGGTTCTGATAATGCTTTTCTTTTCTCTTTA
CAAACGTCTTCCGACTAACGGCTCCTGAAATCCCGGGCGTATGACGGGTT
CTTACAATTTCATTACTTCATGTGCACTGCAATAATGATCACGAACACTG
GTGGGCGTTGGAAGTTTTGAAGATGGCGGGTCTGTTTTCCTCTGCTTCTA
ATGTGTACTAGTTTATTCCTCGGGTTTTTATTCCCGACCTCAAGATCACT
CAGACATGGCGAGTGCGGCTCATATGTAGAATACCTTAGTTTCCGTCTGG
AACCGAGACAGAGGGCTCATAATGAACTGCATGCTCGTCATTCATCCATC
CATTACTTCTACGTACTCTGCCCGCACACTACTTCAATTAGTCTAACTAC
TCACCTCTCACTTTCTCAACCGCGAACGCAATCGCCCTCGCCAACTCCTC
TCCCTTCTCCCACGCATCATCATGCTCCCCTTTAATATCCAACATCTCCA
back to top

Coding sequence (CDS) from alignment at ch8:2082737..2084836+

>KJC3_011944-T1 ID=KJC3_011944-T1|Name=KJC3_011944-T1|organism=Aspergillus niger KJC3|type=CDS|length=2385bp|location=Sequence derived from alignment at ch8:2082737..2084836+ (Aspergillus niger KJC3)
ATGGAGGACTTCAACAGCGAAACCGACAGTGACTACACTAGCTACTGGAG
AGATTGGTTCATCTCCTCTCGTGGAAACGAATACTTCTGCGAGATCGACG
AAGATTACTTGACCGATCGCTTCAACCTCACTGGCCTGAACACCGAGGTC
GCTTACTATCAGTATGCCTTGGACCTTGTGACGGACGTGTTTGACCTCGA
CGCGGACGACGACCTGCGCGAGCAAATCGAAAAGTCGGCGCGTCACCTCT
ATGGTCTGGTCCATGCCAGATACATTGTCACAACCCGCGGTCTTGCCAAG
ATGGTCGAGAAGTACAAGCGCTGCGATTTCGGCAAATGCCCCCGTGTCAT
GTGTGACGGACACCCCCTCCTGCCTATGGGCCAGCACGACGTTGCCAACC
AGAGCACTGTTCGCCTGTACTGCCCCAAGTGCGAGGACATCTACAACCCC
AAGTCATCCCGTCATGCTTCCATCGACGGCGCTTACTTCGGCACGTCGTT
CCATAGCATGCTCTTCCAGGTGTATCCTGCTTTGCTTCCCGAGAAGAGCA
TTCGCCGCTATGAGCCCCGCGTCTTCGGTTTCAAGGTGCACGCCATGGCG
GCCCTTGCGCGCTGGCAGGATATCTTCCGGGAGGAGACGAAGGCGTCCCT
TCGCGAAGCCGGTGTGGAAGCCAAATACATCGAAGATGACAGTGAGGAGG
AAGAGCTAGATGACGACGACGAACCTATCTCTGAGACCAAAGAAGAGAGA
GTCGCCGGCGATGCCGCCTCTGGCCGTATGGATCTTGGCAACTGAATGGA
GGACTTCAACAGCGAAACCGACAGTGACTACACTAGCTACTGGAGAGATT
GGTTCATCTCCTCTCGTGGAAACGAATACTTCTGCGAGATCGACGAAGAT
TACTTGACCGATCGCTTCAACCTCACTGGCCTGAACACCGAGGTCGCTTA
CTATCAGTATGCCTTGGACCTTGTGACGGACGTGTTTGACCTCGACGCGG
ACGACGACCTGCGCGAGCAAATCGAAAAGTCGGCGCGTCACCTCTATGGT
CTGGTCCATGCCAGATACATTGTCACAACCCGCGGTCTTGCCAAGATGGT
CGAGAAGTACAAGCGCTGCGATTTCGGCAAATGCCCCCGTGTCATGTGTG
ACGGACACCCCCTCCTGCCTATGGGCCAGCACGACGTTGCCAACCAGAGC
ACTGTTCGCCTGTACTGCCCCAAGTGCGAGGACATCTACAACCCCAAGTC
ATCCCGTCATGCTTCCATCGACGGCGCTTACTTCGGCACGTCGTTCCATA
GCATGCTCTTCCAGGTGTATCCTGCTTTGCTTCCCGAGAAGAGCATTCGC
CGCTATGAGCCCCGCGTCTTCGGTTTCAAGGTGCACGCCATGGCGGCCCT
TGCGCGCTGGCAGGATATCTTCCGGGAGGAGACGAAGGCGTCCCTTCGCG
AAGCCGGTGTGGAAGCCAAATACATCGAAGATGACAGTGAGGAGGAAGAG
CTAGATGACGACGACGAACCTATCTCTGAGACCAAAGAAGAGAGAGTCGC
CGGCGATGCCGCCTCTGGCCGTATGGATCTTGGCAACTGAATGGAGGACT
TCAACAGCGAAACCGACAGTGACTACACTAGCTACTGGAGAGATTGGTTC
ATCTCCTCTCGTGGAAACGAATACTTCTGCGAGATCGACGAAGATTACTT
GACCGATCGCTTCAACCTCACTGGCCTGAACACCGAGGTCGCTTACTATC
AGTATGCCTTGGACCTTGTGACGGACGTGTTTGACCTCGACGCGGACGAC
GACCTGCGCGAGCAAATCGAAAAGTCGGCGCGTCACCTCTATGGTCTGGT
CCATGCCAGATACATTGTCACAACCCGCGGTCTTGCCAAGATGGTCGAGA
AGTACAAGCGCTGCGATTTCGGCAAATGCCCCCGTGTCATGTGTGACGGA
CACCCCCTCCTGCCTATGGGCCAGCACGACGTTGCCAACCAGAGCACTGT
TCGCCTGTACTGCCCCAAGTGCGAGGACATCTACAACCCCAAGTCATCCC
GTCATGCTTCCATCGACGGCGCTTACTTCGGCACGTCGTTCCATAGCATG
CTCTTCCAGGTGTATCCTGCTTTGCTTCCCGAGAAGAGCATTCGCCGCTA
TGAGCCCCGCGTCTTCGGTTTCAAGGTGCACGCCATGGCGGCCCTTGCGC
GCTGGCAGGATATCTTCCGGGAGGAGACGAAGGCGTCCCTTCGCGAAGCC
GGTGTGGAAGCCAAATACATCGAAGATGACAGTGAGGAGGAAGAGCTAGA
TGACGACGACGAACCTATCTCTGAGACCAAAGAAGAGAGAGTCGCCGGCG
ATGCCGCCTCTGGCCGTATGGATCTTGGCAACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005956protein kinase CK2 complex
Vocabulary: Molecular Function
TermDefinition
GO:0019887protein kinase regulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CKB2KJC3_011944Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011944-T1KJC3_011944-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011944-T1.utr5p1KJC3_011944-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011944-T1.exon1KJC3_011944-T1.exon1Aspergillus niger KJC3exon
KJC3_011944-T1.exon2KJC3_011944-T1.exon2Aspergillus niger KJC3exon
KJC3_011944-T1.exon3KJC3_011944-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011944-T1.cdsKJC3_011944-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011944-T1.utr3p1KJC3_011944-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035991
DBxrefInterPro:IPR016149
DBxrefInterPro:IPR000704
DBxrefPFAM:PF01214
Productcasein kinase 2 regulatory subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2082737..2084836 +
Powered by Drupal