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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2123194..2124310+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011959-T1 ID=KJC3_011959-T1|Name=KJC3_011959-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1117bp|location=Sequence derived from alignment at ch8:2123194..2124310+ (Aspergillus niger KJC3)
GGTTATTTAAGGTTTCATCTTCCGTTCTCTAGTAGTCCTCAACTTAGTAC
ATAATATACTACTCTCCTCATACCTATACCGAGACACATACATACACACA
TACTAAACAATATACACCATGCCCCGCCCAACAACCCGACAAGAAGTCCT
CGCCCGTCTACGCAAGACCATCGCCGATGGTTCCATCATCATCGGTGCGG
GAGCCGGTATGTACCCATCCCTTCAGCATACTAAACCTCACTTACTACCA
TCTCTCCCATACATCCAATCAACACCGACTAACCATAACAATGACATGAA
ATGTAGGAATCGGCCTCTCCGCCAAATTCATCGAAAAAGGCGGCGCCGAC
CTCATCCTCGTCTACAACTCGGGCCGATTTCGCATGGCGGGCCGAGGTTC
TCTCGCAGGGATGATGCCCTACTCTGACGCCAACGCCGTGGTCGTAGAGA
TGGTGATCCCATCCCCGTCCCCCCACACCTACCACTCATAACTAGATACT
AATTGCCATTAAACCAGTCCAACGAAGTCCTCCCCCTCATCCAAAACACC
CCCGTCCTGGCGGGCGTGTGTGGCACTGACCCCTTCCGGGACATGCGGAC
CTTCCTGCGCCAACTACGGGACATCGGGTTCGTCGGCGTGCAAAACTTCC
CGACAGTCGGGCTGATCGACGGGAACTTCCGCGCGAACCTCGAAGAAACG
GGGATGGGGTATGAGAAAGAGGTGGAGATGATTCGGATCGCACGGGAAAT
GGATCTGGTGACGACGCCGTACGTGTTTAACGTGAAGGAAGGGGAGATGA
TGGCGCGGGCGGGAGCGGATGTGATTGTGGTGCATGTGGGATTGACGACG
AGTGGGACGATTGGAGCGCAGACGGCGTTGACGTTGGATGAGTGTGTGAA
GGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTGA
TTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTAT
GTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTAT
GGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTTA
AGGAGATTCAGTTGTAA back to topCoding sequence (CDS) from alignment at ch8:2123194..2124310+ >KJC3_011959-T1 ID=KJC3_011959-T1|Name=KJC3_011959-T1|organism=Aspergillus niger KJC3|type=CDS|length=2502bp|location=Sequence derived from alignment at ch8:2123194..2124310+ (Aspergillus niger KJC3)
ATGCCCCGCCCAACAACCCGACAAGAAGTCCTCGCCCGTCTACGCAAGAC
CATCGCCGATGGTTCCATCATCATCGGTGCGGGAGCCGGAATCGGCCTCT
CCGCCAAATTCATCGAAAAAGGCGGCGCCGACCTCATCCTCGTCTACAAC
TCGGGCCGATTTCGCATGGCGGGCCGAGGTTCTCTCGCAGGGATGATGCC
CTACTCTGACGCCAACGCCGTGGTCGTAGAGATGTCCAACGAAGTCCTCC
CCCTCATCCAAAACACCCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCC
TTCCGGGACATGCGGACCTTCCTGCGCCAACTACGGGACATCGGGTTCGT
CGGCGTGCAAAACTTCCCGACAGTCGGGCTGATCGACGGGAACTTCCGCG
CGAACCTCGAAGAAACGGGGATGGGGTATGAGAAAGAGGTGGAGATGATT
CGGATCGCACGGGAAATGGATCTGGTGACGACGCCGTACGTGTTTAACGT
GAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGC
ATGTGGGATTGACGACGAGTGGGACGATTGGAGCGCAGACGGCGTTGACG
TTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAA
GGTCAATCCGGAGGTGATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGC
CGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTC
TTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGA
GAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAAATGCCCCGCCCAACAA
CCCGACAAGAAGTCCTCGCCCGTCTACGCAAGACCATCGCCGATGGTTCC
ATCATCATCGGTGCGGGAGCCGGAATCGGCCTCTCCGCCAAATTCATCGA
AAAAGGCGGCGCCGACCTCATCCTCGTCTACAACTCGGGCCGATTTCGCA
TGGCGGGCCGAGGTTCTCTCGCAGGGATGATGCCCTACTCTGACGCCAAC
GCCGTGGTCGTAGAGATGTCCAACGAAGTCCTCCCCCTCATCCAAAACAC
CCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCCTTCCGGGACATGCGGA
CCTTCCTGCGCCAACTACGGGACATCGGGTTCGTCGGCGTGCAAAACTTC
CCGACAGTCGGGCTGATCGACGGGAACTTCCGCGCGAACCTCGAAGAAAC
GGGGATGGGGTATGAGAAAGAGGTGGAGATGATTCGGATCGCACGGGAAA
TGGATCTGGTGACGACGCCGTACGTGTTTAACGTGAAGGAAGGGGAGATG
ATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGCATGTGGGATTGACGAC
GAGTGGGACGATTGGAGCGCAGACGGCGTTGACGTTGGATGAGTGTGTGA
AGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTG
ATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTA
TGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTA
TGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTT
AAGGAGATTCAGTTGTAAATGCCCCGCCCAACAACCCGACAAGAAGTCCT
CGCCCGTCTACGCAAGACCATCGCCGATGGTTCCATCATCATCGGTGCGG
GAGCCGGAATCGGCCTCTCCGCCAAATTCATCGAAAAAGGCGGCGCCGAC
CTCATCCTCGTCTACAACTCGGGCCGATTTCGCATGGCGGGCCGAGGTTC
TCTCGCAGGGATGATGCCCTACTCTGACGCCAACGCCGTGGTCGTAGAGA
TGTCCAACGAAGTCCTCCCCCTCATCCAAAACACCCCCGTCCTGGCGGGC
GTGTGTGGCACTGACCCCTTCCGGGACATGCGGACCTTCCTGCGCCAACT
ACGGGACATCGGGTTCGTCGGCGTGCAAAACTTCCCGACAGTCGGGCTGA
TCGACGGGAACTTCCGCGCGAACCTCGAAGAAACGGGGATGGGGTATGAG
AAAGAGGTGGAGATGATTCGGATCGCACGGGAAATGGATCTGGTGACGAC
GCCGTACGTGTTTAACGTGAAGGAAGGGGAGATGATGGCGCGGGCGGGAG
CGGATGTGATTGTGGTGCATGTGGGATTGACGACGAGTGGGACGATTGGA
GCGCAGACGGCGTTGACGTTGGATGAGTGTGTGAAGGTGGTGCAGGAGGT
GCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTGATTGTGTTGTGTCATG
GAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTATGTGTTGAAGAGGTGT
CAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTATGGAGAGGTTGCCGGT
GGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTTAAGGAGATTCAGTTGT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011959-T1.utr5p1 | KJC3_011959-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR009215 |
| DBxref | InterPro:IPR013785 |
| DBxref | PFAM:PF09370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2123194..2124310 + |
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