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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2190052..2192324+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011981-T1 ID=KJC3_011981-T1|Name=KJC3_011981-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2273bp|location=Sequence derived from alignment at ch8:2190052..2192324+ (Aspergillus niger KJC3)
GGCTGCTCTTAAATTAAATGCGCATCGAGGGGATTCCCGTCTGTTGCCTT
CTTTTGATCTCCCTGGTGTCGGTTGCCTGTGCGCGTGCTGTCTTCCTATT
TCGTTACGAGAAGAAGAGCATGCGGCTGTTGTTCTCGCCATGCCGAGTCT
CGACATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGATACAGTTGTCC
CGCATGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGTCGGCTCTAGAA
AAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATACCGCAGCGTTC
TCTCCTGTTCTTCGGTACGCTACGACCTGCTGGCCGGATCGAGCTCTATC
TCTTACTCATATGTAGCGTGATACAGATGAGTTCTGCACCGTTCGCGTTG
TCTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAACAGTATCTTCCG
CACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCCGCCGAGACAGT
CGCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTCAGGGGTTGTAG
ATTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGAGACACAGGT
GGGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCATTCTTGAGTAA
GGACTCCGTCCTTGTTCCGGCATCCTGTCGTGCTGATAAACCTCAGAGCG
CCCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCTGCTA
GCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGACTAC
CTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGTCGAG
TGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGGCTCC
TGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATATAATGTCCAG
CAACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAAGGAT
ACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTTGCAA
GCCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATTTGAC
AAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAGATGC
ACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATCACCC
TTGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATCGACA
ACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCCACCT
GTCGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAACCAACGTTG
ATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCTCTA
CAACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAAGCAA
CGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAGCGGG
CATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCTCCA
CATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAACCG
ATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGAAGA
AGCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGCGACG
AGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACATTGT
CCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTTCTC
TAAGTACCGACGTTCGGGCTGGGTGGGTAGCCCCTTCACTCTTCCCTTTT
CCTTTGCCCCAGCTGATCATATAATAGTCCCCTTTTGCCTGGCACCTGTT
TTTCTACGGAACTGAAATTGCTTCCATTGGCGGTGGGGGCACTTCGTCTG
GAAGCTGTACGTCTGGTGGATGTAAATACGAACGAGACGATTGATATTAA
AGATCTCCCGGACATCCATTCCTTTGAAAGGAAAGGTCGACCGATTGAGG
TGGTCAGTTGAGAGGAGATGTGGGTTACTTTTATGATAGATAGCTTGAAT
GCTGGCTAGTTACGATGCATGTTCATGGACTTTGCTATCTTCACGATTTA
AAGGATAGATAGCATGAGTAGCGGGTGGTGAGAAGGAACGAAGACTTGTC
AAGTCTCATTATCAGTTGCATGTATATCCTATCAATACAGCATTTAATCT
ATGTGATGAAAGTTGAGTCTCCC back to topCoding sequence (CDS) from alignment at ch8:2190052..2192324+ >KJC3_011981-T1 ID=KJC3_011981-T1|Name=KJC3_011981-T1|organism=Aspergillus niger KJC3|type=CDS|length=7020bp|location=Sequence derived from alignment at ch8:2190052..2192324+ (Aspergillus niger KJC3)
ATGCCGAGTCTCGACATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGA
TACAGTTGTCCCGCATGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGT
CGGCTCTAGAAAAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATA
CCGCAGCGTTCTCTCCTGTTCTTCGATGAGTTCTGCACCGTTCGCGTTGT
CTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAACAGTATCTTCCGC
ACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCCGCCGAGACAGTC
GCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTCAGGGGTTGTAGA
TTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGAGACACAGGTG
GGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCATTCTTGAAGCGC
CCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCTGCTAG
CCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGACTACC
TCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGTCGAGT
GATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGGCTCCT
GCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATATAATGTCCAGC
AACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAAGGATA
CGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTTGCAAG
CCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATTTGACA
AGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAGATGCA
CCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATCACCCT
TGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATCGACAA
CTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCCACCTG
TCGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAACCAACGTTGA
TTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCTCTAC
AACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAAGCAAC
GCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAGCGGGC
ATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCTCCAC
ATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAACCGA
TCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGAAGAA
GCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGCGACGA
GCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACATTGTC
CATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTTCTCT
AAGTACCGACGTTCGGGCTGGTCCCCTTTTGCCTGGCACCTGTTTTTCTA
CGGAACTGAAATTGCTTCCATTGGCGGTGGGGGCACTTCGTCTGGAAGCT
GTACGTCTGGTGGATGTAAATACGAACGAGACGATTGATATTAAAGATCT
CCCGGACATCCATTCCTTTGAAAGGAAAGGTCGACCGATTGAGGTGGTCA
GTTGAATGCCGAGTCTCGACATCCCCGGGGAATTCCTCCGACATGCTGTT
CTAGATACAGTTGTCCCGCATGCTTCAGATGCCGACCTAGAGGCGGCTCT
GACGTCGGCTCTAGAAAAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGC
TCATACCGCAGCGTTCTCTCCTGTTCTTCGATGAGTTCTGCACCGTTCGC
GTTGTCTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAACAGTATCT
TCCGCACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCCGCCGAGA
CAGTCGCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTCAGGGGTT
GTAGATTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGAGACAC
AGGTGGGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCATTCTTGA
AGCGCCCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCT
GCTAGCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGA
CTACCTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGT
CGAGTGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGG
CTCCTGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATATAATGT
CCAGCAACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAA
GGATACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTT
GCAAGCCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATT
TGACAAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAG
ATGCACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATC
ACCCTTGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATC
GACAACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCC
ACCTGTCGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAACCAAC
GTTGATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGC
TCTACAACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAA
GCAACGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAG
CGGGCATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCC
TCCACATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGA
ACCGATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGG
AAGAAGCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGC
GACGAGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACA
TTGTCCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTT
TCTCTAAGTACCGACGTTCGGGCTGGTCCCCTTTTGCCTGGCACCTGTTT
TTCTACGGAACTGAAATTGCTTCCATTGGCGGTGGGGGCACTTCGTCTGG
AAGCTGTACGTCTGGTGGATGTAAATACGAACGAGACGATTGATATTAAA
GATCTCCCGGACATCCATTCCTTTGAAAGGAAAGGTCGACCGATTGAGGT
GGTCAGTTGAATGCCGAGTCTCGACATCCCCGGGGAATTCCTCCGACATG
CTGTTCTAGATACAGTTGTCCCGCATGCTTCAGATGCCGACCTAGAGGCG
GCTCTGACGTCGGCTCTAGAAAAAGGCGCAGAGGACCTCACTTCTGTGTT
GTCGCTCATACCGCAGCGTTCTCTCCTGTTCTTCGATGAGTTCTGCACCG
TTCGCGTTGTCTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAACAG
TATCTTCCGCACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCCGC
CGAGACAGTCGCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTCAG
GGGTTGTAGATTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGA
GACACAGGTGGGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCATT
CTTGAAGCGCCCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCG
CCTCTGCTAGCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGA
GACGACTACCTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCC
GCTGTCGAGTGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCAT
CTAGGCTCCTGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATAT
AATGTCCAGCAACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAG
TGCAAGGATACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCA
CTGTTGCAAGCCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTC
ACATTTGACAAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCT
TACAGATGCACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATG
ATATCACCCTTGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAAT
CCATCGACAACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAAT
AATCCACCTGTCGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAA
CCAACGTTGATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGC
CAGGCTCTACAACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAA
CCAAAGCAACGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGA
GAGAGCGGGCATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGT
GGCCCTCCACATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCAT
CGTGAACCGATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTC
GCCGGAAGAAGCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCA
TCTGCGACGAGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGA
TAACATTGTCCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAAC
TCGTTTCTCTAAGTACCGACGTTCGGGCTGGTCCCCTTTTGCCTGGCACC
TGTTTTTCTACGGAACTGAAATTGCTTCCATTGGCGGTGGGGGCACTTCG
TCTGGAAGCTGTACGTCTGGTGGATGTAAATACGAACGAGACGATTGATA
TTAAAGATCTCCCGGACATCCATTCCTTTGAAAGGAAAGGTCGACCGATT
GAGGTGGTCAGTTGAATGCCGAGTCTCGACATCCCCGGGGAATTCCTCCG
ACATGCTGTTCTAGATACAGTTGTCCCGCATGCTTCAGATGCCGACCTAG
AGGCGGCTCTGACGTCGGCTCTAGAAAAAGGCGCAGAGGACCTCACTTCT
GTGTTGTCGCTCATACCGCAGCGTTCTCTCCTGTTCTTCGATGAGTTCTG
CACCGTTCGCGTTGTCTTACGACTATCCAATTGCTCTCCACCTAGCCTGA
AACAGTATCTTCCGCACCTCGAAGTCCGACTCGATGCCTTTGCCATTGAT
CCCGCCGAGACAGTCGCGGAGAACCCGACCCCGACTCGGGACCTTATATT
TTCAGGGGTTGTAGATTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTG
AGGGAGACACAGGTGGGGGCAACCACGTATATGTGATCTGGAGTGTCAAG
GCATTCTTGAAGCGCCCTCGCATACGCATTCAACACCCTTCCCTCCTCTT
CATCGCCTCTGCTAGCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTC
GGGGAGACGACTACCTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTA
CAGCCGCTGTCGAGTGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCC
CGCATCTAGGCTCCTGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCA
TATATAATGTCCAGCAACATTCCGGCCACCCCATACGCATAGTGCCTGCT
GCCAGTGCAAGGATACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCC
TACCACTGTTGCAAGCCTTGATTTTGAGGTGACACCATTCCTTAATTGCG
ATGTCACATTTGACAAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAA
ACCCTTACAGATGCACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCG
AGATGATATCACCCTTGTATACAAGTTAACGCCCGACTATGCGCCGGACC
CAAATCCATCGACAACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAA
GCAATAATCCACCTGTCGGACAATTGTAACCCGCGGATATTGATGCAATG
GAGAACCAACGTTGATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGAC
CTAGCCAGGCTCTACAACGAAACAACCGCCCCGCGAGTCTTCCAATGACA
CCTAACCAAAGCAACGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTC
TCTGAGAGAGCGGGCATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGT
TCAGTGGCCCTCCACATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATC
TTCATCGTGAACCGATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAAT
CCCTCGCCGGAAGAAGCTGGACCCACGGGGGCATACCGTGCGACCCTCTT
CTTCATCTGCGACGAGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACC
GATGATAACATTGTCCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGC
AGAACTCGTTTCTCTAAGTACCGACGTTCGGGCTGGTCCCCTTTTGCCTG
GCACCTGTTTTTCTACGGAACTGAAATTGCTTCCATTGGCGGTGGGGGCA
CTTCGTCTGGAAGCTGTACGTCTGGTGGATGTAAATACGAACGAGACGAT
TGATATTAAAGATCTCCCGGACATCCATTCCTTTGAAAGGAAAGGTCGAC
CGATTGAGGTGGTCAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:1990071 | TRAPPII protein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006891 | intra-Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011981-T1.utr5p1 | KJC3_011981-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011981-T1.utr3p1 | KJC3_011981-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.3 |
| DBxref | InterPro:IPR024662 |
| DBxref | PFAM:PF12735 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2190052..2192324 + |
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