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KJC3_011993-T1, KJC3_011993-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011993-T1
Unique NameKJC3_011993-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2247150..2248629+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011993-T1 ID=KJC3_011993-T1|Name=KJC3_011993-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1480bp|location=Sequence derived from alignment at ch8:2247150..2248629+ (Aspergillus niger KJC3)
CCAATTTTTTCTTACCCCTCGCAAAAGTCGGAACGACCCCGTCCAACAGA
TTGTGATTGCACCGCCAGCGGATGAACCATCCTTTCATAAATTGAACCGA
TGCCCGAGACCGCCGATCATGTGAGGTTTGAGCGTTGTACATCCTGGCCA
GCAACTCGCCCGGTTCAGTCTCGCCATTGTTGCTTGACCACCTCATCATA
TTTATTCTCCTGTCAGGGACTCTCCGTCTCTTTGCGCCTGCGCGACTGCT
TCCCTTCCTTATCATTTCACCATGGCGCCGTTCCGCAACTTCTTGTCCAG
AAAGTCCACTGCCCCCAATGGCGGGGAAGTCAGTGCCGCTCCGAACGATA
ACTCTGCTAGCCAGGTCTCACTCGACACTCATGGCTCGAGTCCTTTGAGC
TTCAGGAAGAGTTCCGAAAATGAGCCACCTGAATATAAACTCAGTGGTAT
GCCACCTGGGACCAAGTTCAATGGATCCTTTTTACCCCGCTAACTCTATC
CTCTTCCCGCCAGTCGTCGACGCCAATGGAATCTACCATCCCGTATGTGA
ACCACTACCGTTACAATCACATGGGCGGGACTTTTTCGCATGCGGACAAG
TAACTCACATGTCAACAGCCCTCACCTCCAGAGAAACAGGGCTTCTGGCG
CAAGTACCCTGGTTCTCCGAGATCCTCGCACCATCGCGATCTCGTAAACG
AGAACGAACCCTTCTCGATATCTCGCGAATCATTTGATTCGTATCGCCGA
TCATTTGTAATTACCCATTCGTACTTGAACCTGTTTGTTTTTCGCAAGAG
TGACTTACACCGCGCTTACAGGATATCTCTGCCCGATCACCCGTATGCTA
TACCGATGCGATGCCATCTCGGACATCGCTTGACTCTCGAGTCTCCCATA
TAACATCAACACCATCTACGCTATACTCAAATCTAAGCAAGCAGCCGGAA
GCCATGGAAGAAGAGCAATATGAGGAGGTTGCGCTCGACGACGAGGAAGT
CAAACCAAAGCGGAAGAGCATCTTCTCTCGATTTGGCGACTTCACAAACG
ACTCTTCACAGAACTCCAGTACCACCAAATCATCGACTCTCGGCTTTCAC
ATCCCAGGCCGTAAGAGAGGCCCAAGCAATGTGGGCTCAGAATTAGGTAC
TTTCAAAGCACCGCCGGCTAATGCAGAATCGGAGGTGCATGATGCGTGAT
ACGAGCGCAGGGGGTGTGTAACTATATACTGGGTAATTCATAATCTGTAG
GCGTCTGGAAGGGGATTACCATTGAAGTGAATTATTTTTGTTTTTCAATC
ACCCTCGACAGTTGTGCGTGTTGCTTGTCTGATTCATTGTGTGGGTTTTG
GCTTAAATCTAATCGCATTGCGCGCTGTCGGGGCTTTGCATCGGTGACTT
TTGATGTTTCTTTTGATCCATCGATAGAGATTCCTGCATGCGAAACATTT
TTCTGAGCCAATATAAATGACTAGATGACC
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Coding sequence (CDS) from alignment at ch8:2247150..2248629+

>KJC3_011993-T1 ID=KJC3_011993-T1|Name=KJC3_011993-T1|organism=Aspergillus niger KJC3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch8:2247150..2248629+ (Aspergillus niger KJC3)
ATGGCGCCGTTCCGCAACTTCTTGTCCAGAAAGTCCACTGCCCCCAATGG
CGGGGAAGTCAGTGCCGCTCCGAACGATAACTCTGCTAGCCAGGTCTCAC
TCGACACTCATGGCTCGAGTCCTTTGAGCTTCAGGAAGAGTTCCGAAAAT
GAGCCACCTGAATATAAACTCAGTGTCGTCGACGCCAATGGAATCTACCA
TCCCCCCTCACCTCCAGAGAAACAGGGCTTCTGGCGCAAGTACCCTGGTT
CTCCGAGATCCTCGCACCATCGCGATCTCGTAAACGAGAACGAACCCTTC
TCGATATCTCGCGAATCATTTGATTCGTATCGCCGATCATTTGATATCTC
TGCCCGATCACCCGTATGCTATACCGATGCGATGCCATCTCGGACATCGC
TTGACTCTCGAGTCTCCCATATAACATCAACACCATCTACGCTATACTCA
AATCTAAGCAAGCAGCCGGAAGCCATGGAAGAAGAGCAATATGAGGAGGT
TGCGCTCGACGACGAGGAAGTCAAACCAAAGCGGAAGAGCATCTTCTCTC
GATTTGGCGACTTCACAAACGACTCTTCACAGAACTCCAGTACCACCAAA
TCATCGACTCTCGGCTTTCACATCCCAGGCCGTAAGAGAGGCCCAAGCAA
TGTGGGCTCAGAATTAGGTACTTTCAAAGCACCGCCGGCTAATGCAGAAT
CGGAGGTGCATGATGCGTGAATGGCGCCGTTCCGCAACTTCTTGTCCAGA
AAGTCCACTGCCCCCAATGGCGGGGAAGTCAGTGCCGCTCCGAACGATAA
CTCTGCTAGCCAGGTCTCACTCGACACTCATGGCTCGAGTCCTTTGAGCT
TCAGGAAGAGTTCCGAAAATGAGCCACCTGAATATAAACTCAGTGTCGTC
GACGCCAATGGAATCTACCATCCCCCCTCACCTCCAGAGAAACAGGGCTT
CTGGCGCAAGTACCCTGGTTCTCCGAGATCCTCGCACCATCGCGATCTCG
TAAACGAGAACGAACCCTTCTCGATATCTCGCGAATCATTTGATTCGTAT
CGCCGATCATTTGATATCTCTGCCCGATCACCCGTATGCTATACCGATGC
GATGCCATCTCGGACATCGCTTGACTCTCGAGTCTCCCATATAACATCAA
CACCATCTACGCTATACTCAAATCTAAGCAAGCAGCCGGAAGCCATGGAA
GAAGAGCAATATGAGGAGGTTGCGCTCGACGACGAGGAAGTCAAACCAAA
GCGGAAGAGCATCTTCTCTCGATTTGGCGACTTCACAAACGACTCTTCAC
AGAACTCCAGTACCACCAAATCATCGACTCTCGGCTTTCACATCCCAGGC
CGTAAGAGAGGCCCAAGCAATGTGGGCTCAGAATTAGGTACTTTCAAAGC
ACCGCCGGCTAATGCAGAATCGGAGGTGCATGATGCGTGAATGGCGCCGT
TCCGCAACTTCTTGTCCAGAAAGTCCACTGCCCCCAATGGCGGGGAAGTC
AGTGCCGCTCCGAACGATAACTCTGCTAGCCAGGTCTCACTCGACACTCA
TGGCTCGAGTCCTTTGAGCTTCAGGAAGAGTTCCGAAAATGAGCCACCTG
AATATAAACTCAGTGTCGTCGACGCCAATGGAATCTACCATCCCCCCTCA
CCTCCAGAGAAACAGGGCTTCTGGCGCAAGTACCCTGGTTCTCCGAGATC
CTCGCACCATCGCGATCTCGTAAACGAGAACGAACCCTTCTCGATATCTC
GCGAATCATTTGATTCGTATCGCCGATCATTTGATATCTCTGCCCGATCA
CCCGTATGCTATACCGATGCGATGCCATCTCGGACATCGCTTGACTCTCG
AGTCTCCCATATAACATCAACACCATCTACGCTATACTCAAATCTAAGCA
AGCAGCCGGAAGCCATGGAAGAAGAGCAATATGAGGAGGTTGCGCTCGAC
GACGAGGAAGTCAAACCAAAGCGGAAGAGCATCTTCTCTCGATTTGGCGA
CTTCACAAACGACTCTTCACAGAACTCCAGTACCACCAAATCATCGACTC
TCGGCTTTCACATCCCAGGCCGTAAGAGAGGCCCAAGCAATGTGGGCTCA
GAATTAGGTACTTTCAAAGCACCGCCGGCTAATGCAGAATCGGAGGTGCA
TGATGCGTGAATGGCGCCGTTCCGCAACTTCTTGTCCAGAAAGTCCACTG
CCCCCAATGGCGGGGAAGTCAGTGCCGCTCCGAACGATAACTCTGCTAGC
CAGGTCTCACTCGACACTCATGGCTCGAGTCCTTTGAGCTTCAGGAAGAG
TTCCGAAAATGAGCCACCTGAATATAAACTCAGTGTCGTCGACGCCAATG
GAATCTACCATCCCCCCTCACCTCCAGAGAAACAGGGCTTCTGGCGCAAG
TACCCTGGTTCTCCGAGATCCTCGCACCATCGCGATCTCGTAAACGAGAA
CGAACCCTTCTCGATATCTCGCGAATCATTTGATTCGTATCGCCGATCAT
TTGATATCTCTGCCCGATCACCCGTATGCTATACCGATGCGATGCCATCT
CGGACATCGCTTGACTCTCGAGTCTCCCATATAACATCAACACCATCTAC
GCTATACTCAAATCTAAGCAAGCAGCCGGAAGCCATGGAAGAAGAGCAAT
ATGAGGAGGTTGCGCTCGACGACGAGGAAGTCAAACCAAAGCGGAAGAGC
ATCTTCTCTCGATTTGGCGACTTCACAAACGACTCTTCACAGAACTCCAG
TACCACCAAATCATCGACTCTCGGCTTTCACATCCCAGGCCGTAAGAGAG
GCCCAAGCAATGTGGGCTCAGAATTAGGTACTTTCAAAGCACCGCCGGCT
AATGCAGAATCGGAGGTGCATGATGCGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011993KJC3_011993Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011993-T1KJC3_011993-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011993-T1.utr5p1KJC3_011993-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011993-T1.exon1KJC3_011993-T1.exon1Aspergillus niger KJC3exon
KJC3_011993-T1.exon2KJC3_011993-T1.exon2Aspergillus niger KJC3exon
KJC3_011993-T1.exon3KJC3_011993-T1.exon3Aspergillus niger KJC3exon
KJC3_011993-T1.exon4KJC3_011993-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011993-T1.cdsKJC3_011993-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011993-T1.utr3p1KJC3_011993-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2247150..2248629 +
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