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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2259340..2262907- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011998-T3 ID=KJC3_011998-T3|Name=KJC3_011998-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3568bp|location=Sequence derived from alignment at ch8:2259340..2262907- (Aspergillus niger KJC3)
CCACGGATGATGAACCTGAATCGATAGTTAGTCAACACCAGTCACCGATC
TCATCACCGCCTTTCATGCGGTGAGGCGCATCTCAACCGAAACCCGTGAC
GGTGCAGGCGGCCAGTGACAGACCGCCCGTAGAAAAGTCGTGGTTTTGCC
GCTGCTTGCTCCAGATTTCCCCTTCATCCCACTCCCTCTGGTGCGCTGCC
TCATTCTAGTCTCTATCATTGCGTGCAGTTCTGCACTATTCCTCCCCTGG
ATCATTCAGTTAACGTTAGCCCATCAATCCTCATCTTTCCAAACCTTGTG
CGGCACCTTCCGAACGGCGTGGTGGGTTCTGCCGGTCGGTGTTGTGGCCA
AGCTGCTATTTTGCCATCCGTTTCTCTCACCCCTCGTCTTCTCGAGACCC
TGTGTGCGTCACTGTCTCACGGCTCCGGCGTGCGCGCTGTGCCTTTTTGA
ATCGATAGATCTGTCGCTTACAATATCTTTAGTGCCTTTACACGCGCAGT
CTTTGCTCGAGTCATCCCCCCATTTTATTGTGTTAATCCCGGTCCCTCCT
TGCCGAGTGCCCGCCCGGCCACACACTTTCCCTCTCAATGGGTCGCAAAC
CGAACCAACTCATCCTCGAGTTCTTCATTCGAGGCCAGAAACTCGAGGAC
GCCAGTAATCGCTACCAACACACGTGCAAAGCTTGCGGCGAGAAATTCCC
CAAGGGTCGCATCGACAGTTTGACCAACCATCTCGTGAAGAAGTGTCAAG
CCATCCCGTTGCGCGATCGGCAACGCGTCTTGTTGCGACTCCACGAACTT
CCCGATCTCGCCGATGGCGACCAGAACAAGGATGTGACAGGGCAAAGTAA
GGGCAAGTCGGTGGACCTGCCCTTCACTACACGCCAAAATTTCGATGGTC
TCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGGTGCGTCCGACCAGACG
AAACGGGGCGGTCCTGCATACACTCAGTCGGTGACAGTCGGGGGAAAGAC
CGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGCTTTCAAGGTCATCCTA
CACAGCCGGAGCAGATTGAAGAAGATGCGACCAACGCTCCAGGTATGTCT
GTCCAGGTTGTGACCTTCACTCCCTCTCCTTGCCAGAGCTTCATTCACTC
ATCCCGCTCCCTTTGTCCATTTGCGGCGCGCTAACGCATATAATCTCTCA
GGCACTCCTCAAGGTTCCAACGCTTCTTCTGTACCTTCCCTGCCTAGTTC
CTCTCAAGATCAGCCGCAAGCCGCATCCCCCCCGTTGCCAGACGTTTCGT
TGACCCCGGACCCCACCTCCAATGCGCGCCAGTCGCAACTGTCCATGATT
GCTGCTTCCGCTAGTGAGATGGTGCCCCACGGTCTCCCAATGGATCACGA
TGCGGGCGCTGGTCTTACCGACGGTATGCCTAAGATGAGTCCCTCGTGGA
ACCAGCAGCTGTCCACCCAGGAGCAGCTTCTCTTCGACAGCCTCCAAGAA
CATGATCCCACCCTCACTGCAGCCACCCAGCGCGCTGCTTCCTTCCCCCG
TCCTATTGCTATGAACCCCAATTCTCAGGCCAAGGGCTTCGTGAACGAAT
TTGGCAATTCTACCAAGCCTACTAAGCCGAAAGTGCGCGGTCGCTTCTCC
GCCGCCCGACGCCGAGAGGTCCAGGAAGTTCGCAAGCGGGGTGCATGTAT
CCGTTGTCGCATGCTGAAGAAGCCTGTAGGTTGGATGCCCTCTAGTCTTG
AATATTGCCTCTGACAAGTCCCCTGCCTCTAGTGCTCCGGTGATAGCCCG
TGTACCACCTGCGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTG
CATTCGCACGCGCATTGCCGAAGAATTCGAGCTGTACAATGCAAGTATGT
AGCTTGGCCTTGGTGGTGGTTGTCACACATGGACTAACCATTGCAGATTT
GCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAATCAAATCA
AATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCGAGGAGAGC
ATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCATCCGCGTC
GACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACAGTTCCAGG
GGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATGATCTTCCT
GGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTCTACGAGCG
GGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGCAGAGCTAA
GCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAGTTAGCAGC
GTTGGTTGACTTCTTTTCAGGATGTGTTGCTCGAACGGGTGCTGGAACTG
TGGATTGCCACTCACATTCTCGCCGATGGAGAATTGCAGTGGAAGACATT
CTGCAACCCGACTCTCCCTCCCACGTCGATGCATTCTCTTGCACAGCCAT
CAGACGACGGCCGCACACCCATTGATAGTGTCACCAACAGCGAGTCATAT
GAACTCCTATGCAGCCAGCTGCGGGCCGCAACCGAGAAACGCGCGTCTCA
GTTGAGCAAGTCGGTCATGAATGATCTCGAGCGCCGACTGCTTCAGCGCC
AGCAGAGCGGCTGGTTCGAGACCTTCTTGGTTGCGCTTATCTTATTGAAC
TGCGTGGAGCGGACGTGCTGGCTATTCCGGTCCTGGGACGATGAGAACTT
TGCTCAGCGGGTAAGCTCACCGCCATACTCCAAAGCGGTCTGTATACTAA
CTCGTTCCACAGTGGCCCTTGGACAAGCGCCCACCTTACTACGCCAATCA
AGGCGATCGCTTCTCCGACATTCTGCACATGTTGCTGAAGATGCGTAGCC
TTCCACCAAAAGCTACTCCTCGACCAGATACCGGCATTCTAAAGGCCGTG
GATGGTAGTGACGAGAACGCAGCTCGCTGGTTTGACATGATCAAAGTGAC
TCGTACGTACCTCATTAGGCCTCGAATCTCAGATAGATCGGTGCTAACTA
CGAATAGCTCTCTTCCTCGAGCAACGTCAAGCCACTGTCTTTGATCCTAC
TGACTCCCGCTCCCTCGACCTTCGCTACGGAGCCAAGCTCCTCCCCCCTA
CGAACGTCTACACCTAATTCTGCCTTGCTGCGTCTGCTAGTATCTTCTAG
TACCAGTTGACGAAATACAGAAAGAAAGCACAATAAAAACAAAGTAAACG
ACTTTGATGATGACAACAACAACAACATTAACAACCAACAAACCTCGAAT
CAAGCAGGCTTCTCTTTTCTTATTCCTCTGCACTATCACATGTCTATGAT
TGACCTGTTGGCTCTCGTATATGGTGTAGATGGAAGGGCGTGAGTGTGGG
CATTGGCACGGGCATGCGAGGAAGCAAAAGGAACGGCAGGAAGACGACGG
ACGGATGGATGGACGGAGAATGAATGCAGCGATTATGTGTTTTCTCTTAA
AATTTAACCCCCCTGTAGTAATGTACCGAACGAAATCCATACCTGTGTTT
GATTCACGCCTGAGGCAC back to topCoding sequence (CDS) from alignment at ch8:2259340..2262907- >KJC3_011998-T3 ID=KJC3_011998-T3|Name=KJC3_011998-T3|organism=Aspergillus niger KJC3|type=CDS|length=6216bp|location=Sequence derived from alignment at ch8:2259340..2262907- (Aspergillus niger KJC3)
ATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAATCAA
ATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCGAGGA
GAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCATCCG
CGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACAGTTC
CAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATGATCT
TCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTCTACG
AGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGCAGAG
CTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAGTTAG
CAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTGCGCCAGTG
TCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGCGCATTGCC
GAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCCAACGCTTC
TTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCAAGCCGCAT
CCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCTCCAATGCG
CGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAGATGGTGCC
CCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTACCGACGGTA
TGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCCAGGAGCAG
CTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACTGCAGCCAC
CCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCCCAATTCTC
AGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGCCTACTAAG
CCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAGGTCCAGGA
AGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAAGAAGCCTA
TGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTCGAGGCCAG
AAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAAGCTTGCGG
CGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCATCTCGTGA
AGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCTTGTTGCGA
CTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAGGATGTGAC
AGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTACACGCCAAA
ATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGGTGCG
TCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCGGTGACAGT
CGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGCTTTC
AAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGACCAACGCT
CCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAA
TCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCG
AGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCA
TCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACA
GTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATG
ATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTC
TACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGC
AGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAG
TTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTGCGCC
AGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGCGCAT
TGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCCAACG
CTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCAAGCC
GCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCTCCAA
TGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAGATGG
TGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTACCGAC
GGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCCAGGA
GCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACTGCAG
CCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCCCAAT
TCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGCCTAC
TAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAGGTCC
AGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAAGAAG
CCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTCGAGG
CCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAAGCTT
GCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCATCTC
GTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCTTGTT
GCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAGGATG
TGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTACACGC
CAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGG
TGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCGGTGA
CAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGC
TTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGACCAA
CGCTCCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCC
GCAATCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCAC
TTCGAGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAA
GGCATCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATT
CACAGTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCA
GATGATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTT
CTTCTACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTG
CAGCAGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAA
AAAGTTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTG
CGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGC
GCATTGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCC
AACGCTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCA
AGCCGCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCT
CCAATGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAG
ATGGTGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTAC
CGACGGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCC
AGGAGCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACT
GCAGCCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCC
CAATTCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGC
CTACTAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAG
GTCCAGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAA
GAAGCCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTC
GAGGCCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAA
GCTTGCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCA
TCTCGTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCT
TGTTGCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAG
GATGTGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTAC
ACGCCAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGG
TCGGTGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCG
GTGACAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGA
AGGCTTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGA
CCAACGCTCCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGT
ATCCGCAATCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTAC
CCACTTCGAGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCC
ATAAGGCATCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGAT
GATTCACAGTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGA
TGCAGATGATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGC
CGTTCTTCTACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTG
CTTGCAGCAGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCT
TCAAAAAGTTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCA
CCTGCGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGC
ACGCGCATTGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGG
TTCCAACGCTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGC
CGCAAGCCGCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCC
ACCTCCAATGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAG
TGAGATGGTGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTC
TTACCGACGGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCC
ACCCAGGAGCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCT
CACTGCAGCCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGA
ACCCCAATTCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACC
AAGCCTACTAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCG
AGAGGTCCAGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGC
TGAAGAAGCCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTC
ATTCGAGGCCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTG
CAAAGCTTGCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCA
ACCATCTCGTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGC
GTCTTGTTGCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAA
CAAGGATGTGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCA
CTACACGCCAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGC
CAGGTCGGTGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCA
GTCGGTGACAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGG
CTGAAGGCTTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGAT
GCGACCAACGCTCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2259340..2262907 - |
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