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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2259340..2262907- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011998-T3 ID=KJC3_011998-T3|Name=KJC3_011998-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3568bp|location=Sequence derived from alignment at ch8:2259340..2262907- (Aspergillus niger KJC3) CCACGGATGATGAACCTGAATCGATAGTTAGTCAACACCAGTCACCGATC
TCATCACCGCCTTTCATGCGGTGAGGCGCATCTCAACCGAAACCCGTGAC
GGTGCAGGCGGCCAGTGACAGACCGCCCGTAGAAAAGTCGTGGTTTTGCC
GCTGCTTGCTCCAGATTTCCCCTTCATCCCACTCCCTCTGGTGCGCTGCC
TCATTCTAGTCTCTATCATTGCGTGCAGTTCTGCACTATTCCTCCCCTGG
ATCATTCAGTTAACGTTAGCCCATCAATCCTCATCTTTCCAAACCTTGTG
CGGCACCTTCCGAACGGCGTGGTGGGTTCTGCCGGTCGGTGTTGTGGCCA
AGCTGCTATTTTGCCATCCGTTTCTCTCACCCCTCGTCTTCTCGAGACCC
TGTGTGCGTCACTGTCTCACGGCTCCGGCGTGCGCGCTGTGCCTTTTTGA
ATCGATAGATCTGTCGCTTACAATATCTTTAGTGCCTTTACACGCGCAGT
CTTTGCTCGAGTCATCCCCCCATTTTATTGTGTTAATCCCGGTCCCTCCT
TGCCGAGTGCCCGCCCGGCCACACACTTTCCCTCTCAATGGGTCGCAAAC
CGAACCAACTCATCCTCGAGTTCTTCATTCGAGGCCAGAAACTCGAGGAC
GCCAGTAATCGCTACCAACACACGTGCAAAGCTTGCGGCGAGAAATTCCC
CAAGGGTCGCATCGACAGTTTGACCAACCATCTCGTGAAGAAGTGTCAAG
CCATCCCGTTGCGCGATCGGCAACGCGTCTTGTTGCGACTCCACGAACTT
CCCGATCTCGCCGATGGCGACCAGAACAAGGATGTGACAGGGCAAAGTAA
GGGCAAGTCGGTGGACCTGCCCTTCACTACACGCCAAAATTTCGATGGTC
TCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGGTGCGTCCGACCAGACG
AAACGGGGCGGTCCTGCATACACTCAGTCGGTGACAGTCGGGGGAAAGAC
CGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGCTTTCAAGGTCATCCTA
CACAGCCGGAGCAGATTGAAGAAGATGCGACCAACGCTCCAGGTATGTCT
GTCCAGGTTGTGACCTTCACTCCCTCTCCTTGCCAGAGCTTCATTCACTC
ATCCCGCTCCCTTTGTCCATTTGCGGCGCGCTAACGCATATAATCTCTCA
GGCACTCCTCAAGGTTCCAACGCTTCTTCTGTACCTTCCCTGCCTAGTTC
CTCTCAAGATCAGCCGCAAGCCGCATCCCCCCCGTTGCCAGACGTTTCGT
TGACCCCGGACCCCACCTCCAATGCGCGCCAGTCGCAACTGTCCATGATT
GCTGCTTCCGCTAGTGAGATGGTGCCCCACGGTCTCCCAATGGATCACGA
TGCGGGCGCTGGTCTTACCGACGGTATGCCTAAGATGAGTCCCTCGTGGA
ACCAGCAGCTGTCCACCCAGGAGCAGCTTCTCTTCGACAGCCTCCAAGAA
CATGATCCCACCCTCACTGCAGCCACCCAGCGCGCTGCTTCCTTCCCCCG
TCCTATTGCTATGAACCCCAATTCTCAGGCCAAGGGCTTCGTGAACGAAT
TTGGCAATTCTACCAAGCCTACTAAGCCGAAAGTGCGCGGTCGCTTCTCC
GCCGCCCGACGCCGAGAGGTCCAGGAAGTTCGCAAGCGGGGTGCATGTAT
CCGTTGTCGCATGCTGAAGAAGCCTGTAGGTTGGATGCCCTCTAGTCTTG
AATATTGCCTCTGACAAGTCCCCTGCCTCTAGTGCTCCGGTGATAGCCCG
TGTACCACCTGCGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTG
CATTCGCACGCGCATTGCCGAAGAATTCGAGCTGTACAATGCAAGTATGT
AGCTTGGCCTTGGTGGTGGTTGTCACACATGGACTAACCATTGCAGATTT
GCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAATCAAATCA
AATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCGAGGAGAGC
ATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCATCCGCGTC
GACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACAGTTCCAGG
GGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATGATCTTCCT
GGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTCTACGAGCG
GGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGCAGAGCTAA
GCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAGTTAGCAGC
GTTGGTTGACTTCTTTTCAGGATGTGTTGCTCGAACGGGTGCTGGAACTG
TGGATTGCCACTCACATTCTCGCCGATGGAGAATTGCAGTGGAAGACATT
CTGCAACCCGACTCTCCCTCCCACGTCGATGCATTCTCTTGCACAGCCAT
CAGACGACGGCCGCACACCCATTGATAGTGTCACCAACAGCGAGTCATAT
GAACTCCTATGCAGCCAGCTGCGGGCCGCAACCGAGAAACGCGCGTCTCA
GTTGAGCAAGTCGGTCATGAATGATCTCGAGCGCCGACTGCTTCAGCGCC
AGCAGAGCGGCTGGTTCGAGACCTTCTTGGTTGCGCTTATCTTATTGAAC
TGCGTGGAGCGGACGTGCTGGCTATTCCGGTCCTGGGACGATGAGAACTT
TGCTCAGCGGGTAAGCTCACCGCCATACTCCAAAGCGGTCTGTATACTAA
CTCGTTCCACAGTGGCCCTTGGACAAGCGCCCACCTTACTACGCCAATCA
AGGCGATCGCTTCTCCGACATTCTGCACATGTTGCTGAAGATGCGTAGCC
TTCCACCAAAAGCTACTCCTCGACCAGATACCGGCATTCTAAAGGCCGTG
GATGGTAGTGACGAGAACGCAGCTCGCTGGTTTGACATGATCAAAGTGAC
TCGTACGTACCTCATTAGGCCTCGAATCTCAGATAGATCGGTGCTAACTA
CGAATAGCTCTCTTCCTCGAGCAACGTCAAGCCACTGTCTTTGATCCTAC
TGACTCCCGCTCCCTCGACCTTCGCTACGGAGCCAAGCTCCTCCCCCCTA
CGAACGTCTACACCTAATTCTGCCTTGCTGCGTCTGCTAGTATCTTCTAG
TACCAGTTGACGAAATACAGAAAGAAAGCACAATAAAAACAAAGTAAACG
ACTTTGATGATGACAACAACAACAACATTAACAACCAACAAACCTCGAAT
CAAGCAGGCTTCTCTTTTCTTATTCCTCTGCACTATCACATGTCTATGAT
TGACCTGTTGGCTCTCGTATATGGTGTAGATGGAAGGGCGTGAGTGTGGG
CATTGGCACGGGCATGCGAGGAAGCAAAAGGAACGGCAGGAAGACGACGG
ACGGATGGATGGACGGAGAATGAATGCAGCGATTATGTGTTTTCTCTTAA
AATTTAACCCCCCTGTAGTAATGTACCGAACGAAATCCATACCTGTGTTT
GATTCACGCCTGAGGCAC back to topCoding sequence (CDS) from alignment at ch8:2259340..2262907- >KJC3_011998-T3 ID=KJC3_011998-T3|Name=KJC3_011998-T3|organism=Aspergillus niger KJC3|type=CDS|length=6216bp|location=Sequence derived from alignment at ch8:2259340..2262907- (Aspergillus niger KJC3) ATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAATCAA ATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCGAGGA GAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCATCCG CGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACAGTTC CAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATGATCT TCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTCTACG AGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGCAGAG CTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAGTTAG CAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTGCGCCAGTG TCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGCGCATTGCC GAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCCAACGCTTC TTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCAAGCCGCAT CCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCTCCAATGCG CGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAGATGGTGCC CCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTACCGACGGTA TGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCCAGGAGCAG CTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACTGCAGCCAC CCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCCCAATTCTC AGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGCCTACTAAG CCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAGGTCCAGGA AGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAAGAAGCCTA TGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTCGAGGCCAG AAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAAGCTTGCGG CGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCATCTCGTGA AGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCTTGTTGCGA CTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAGGATGTGAC AGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTACACGCCAAA ATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGGTGCG TCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCGGTGACAGT CGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGCTTTC AAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGACCAACGCT CCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCCGCAA TCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCACTTCG AGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAAGGCA TCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATTCACA GTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCAGATG ATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTTCTTC TACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTGCAGC AGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAAAAAG TTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTGCGCC AGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGCGCAT TGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCCAACG CTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCAAGCC GCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCTCCAA TGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAGATGG TGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTACCGAC GGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCCAGGA GCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACTGCAG CCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCCCAAT TCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGCCTAC TAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAGGTCC AGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAAGAAG CCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTCGAGG CCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAAGCTT GCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCATCTC GTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCTTGTT GCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAGGATG TGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTACACGC CAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGGTCGG TGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCGGTGA CAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGAAGGC TTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGACCAA CGCTCCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGTATCC GCAATCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTACCCAC TTCGAGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCCATAA GGCATCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGATGATT CACAGTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGATGCA GATGATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGCCGTT CTTCTACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTGCTTG CAGCAGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCTTCAA AAAGTTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCACCTG CGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGCACGC GCATTGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGGTTCC AACGCTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGCCGCA AGCCGCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCCACCT CCAATGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAGTGAG ATGGTGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTCTTAC CGACGGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCCACCC AGGAGCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCTCACT GCAGCCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGAACCC CAATTCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACCAAGC CTACTAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCGAGAG GTCCAGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGCTGAA GAAGCCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTCATTC GAGGCCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTGCAAA GCTTGCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCAACCA TCTCGTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGCGTCT TGTTGCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAACAAG GATGTGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCACTAC ACGCCAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGCCAGG TCGGTGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCAGTCG GTGACAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGGCTGA AGGCTTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGATGCGA CCAACGCTCCAGATTTGCACGCTACTCTTGCCTACCACGATGTGAGCGGT ATCCGCAATCAAATCAAATTCGAACACTACGCTGGACGTATTGAGGTTAC CCACTTCGAGGAGAGCATGGTCTACGTTACCTTCAGTGGACTCCAGGGCC ATAAGGCATCCGCGTCGACGCTTGACCCTCAGCTTCAGGCTCTCGGGGAT GATTCACAGTTCCAGGGGCCCCTCCATGAGTTGTATCTGCTGGACAGTGA TGCAGATGATCTTCCTGGGAAGATTGAGATGTACATTAAGAAGACTGCGC CGTTCTTCTACGAGCGGGAGACCTCGGACTTCATGAGACCGACTCTGTTG CTTGCAGCAGAGCTAAGCCAGCAGAAGAAGGTATGTTCCTTGCTCTATCT TCAAAAAGTTAGCAGCGTTGGTTGATGCTCCGGTGATAGCCCGTGTACCA CCTGCGCCAGTGTCGAGAGCGCCCGCTTGTGGAAGCACCCGTGCATTCGC ACGCGCATTGCCGAAGAATTCGAGCTGTACAATGCAAGCACTCCTCAAGG TTCCAACGCTTCTTCTGTACCTTCCCTGCCTAGTTCCTCTCAAGATCAGC CGCAAGCCGCATCCCCCCCGTTGCCAGACGTTTCGTTGACCCCGGACCCC ACCTCCAATGCGCGCCAGTCGCAACTGTCCATGATTGCTGCTTCCGCTAG TGAGATGGTGCCCCACGGTCTCCCAATGGATCACGATGCGGGCGCTGGTC TTACCGACGGTATGCCTAAGATGAGTCCCTCGTGGAACCAGCAGCTGTCC ACCCAGGAGCAGCTTCTCTTCGACAGCCTCCAAGAACATGATCCCACCCT CACTGCAGCCACCCAGCGCGCTGCTTCCTTCCCCCGTCCTATTGCTATGA ACCCCAATTCTCAGGCCAAGGGCTTCGTGAACGAATTTGGCAATTCTACC AAGCCTACTAAGCCGAAAGTGCGCGGTCGCTTCTCCGCCGCCCGACGCCG AGAGGTCCAGGAAGTTCGCAAGCGGGGTGCATGTATCCGTTGTCGCATGC TGAAGAAGCCTATGGGTCGCAAACCGAACCAACTCATCCTCGAGTTCTTC ATTCGAGGCCAGAAACTCGAGGACGCCAGTAATCGCTACCAACACACGTG CAAAGCTTGCGGCGAGAAATTCCCCAAGGGTCGCATCGACAGTTTGACCA ACCATCTCGTGAAGAAGTGTCAAGCCATCCCGTTGCGCGATCGGCAACGC GTCTTGTTGCGACTCCACGAACTTCCCGATCTCGCCGATGGCGACCAGAA CAAGGATGTGACAGGGCAAAGTAAGGGCAAGTCGGTGGACCTGCCCTTCA CTACACGCCAAAATTTCGATGGTCTCAATGTTTTGGCCGAGGCATCGCGC CAGGTCGGTGCGTCCGACCAGACGAAACGGGGCGGTCCTGCATACACTCA GTCGGTGACAGTCGGGGGAAAGACCGTGGTCGTCGACCCGGCTCTCGAGG CTGAAGGCTTTCAAGGTCATCCTACACAGCCGGAGCAGATTGAAGAAGAT GCGACCAACGCTCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR001138 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:2259340..2262907 - |
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