You are here

KJC3_012002-T1, KJC3_012002-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012002-T1
Unique NameKJC3_012002-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2269385..2270672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012002-T1 ID=KJC3_012002-T1|Name=KJC3_012002-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1288bp|location=Sequence derived from alignment at ch8:2269385..2270672- (Aspergillus niger KJC3)
GTTGTCGTTGCTGTTGCTGTGCCGCCGGTCGGATCATGTTGCGTTGGTTA TGACGGGGTTTGTCCTGAAGCTAGCATTACACTCTTCATTCTATATTCCC GACTTGCCGGAGACTTATCGTCGTTATCGGTGTCGTTGATCAACCTCTTT CTGCTTTCTACACACACACACATCACTCGCAACCAACCTACCTACCTATA TACACCCTCATATTATCGTAATCCATCATCCATGGCCACCTCAACCGGTA CCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGGTA CGAGCATCGCTTCCCTGTCATACGGAATGGAAATCCTAACAATGTGTATA CATGATCATAGACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCG TTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATC GCAGCTCAAAGACCTCCTAGAACGAGTACGCATCCACTATGCCCATTCCA TCACAGTTACCATCCTAATACCACAATCACATGAACTAATCTAATGGATC AATCACCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTC CGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCC ACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCT GCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTC CGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATT ACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGAT GGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCG TGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGG TGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGG GATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCT TTGGTTGAGGTGAGGGTTGCTTTACTTTGTTTGAAGCATGTTGTGTTTGT GTTTGTTGTCTGCGTTGTCTATTGTGGGTTTGGGATGGGCGTTTGGAGGA GTGAGATTTGTCTCTTTCTTCTATTCTTTTCTTTGTCTATGCGCTGTCGT TGCGTCTATACTATACAGAGATTAATGGTGGGGGGAGATTTGTTTCCTGG TGTCCGTGGTGTTTGGAGCATATTCCACTCTCACTCAC
back to top

Coding sequence (CDS) from alignment at ch8:2269385..2270672-

>KJC3_012002-T1 ID=KJC3_012002-T1|Name=KJC3_012002-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch8:2269385..2270672- (Aspergillus niger KJC3)
CGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAAC
CCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAG
TCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCC
GAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGA
TGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTG
AGGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTG
AGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAGACGCT
CGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCA
TGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGGGATGCGTTG
ATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAG
GTGAACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGA
AGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATCGCAGCTC
AAAGACCTCCTAGAACGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGCGCGACTCTCTGATCT
CCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCC
CTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCG
TCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCG
CTAATCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCG
AACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGAT
TGATGAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTA
TTAATGAGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGA
CGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGG
GAAGATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTA
TTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAACCGAGAACCTC
TTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACC
CTCGGAGGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAAC
GAATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCC
CGATCTCTCGAGACTCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCT
CCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACC
TCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGT
CTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAA
CGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGG
AAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAAT
ATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGG
TCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGG
CGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAG
AGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTT
GATGTTGCTTTGGTTGAGGTGAACCGAGAACCTCTTCCACACATACTCTC
AATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAG
CGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAATGGCCACCTCAAC
CGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTC
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005801cis-Golgi network
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012002KJC3_012002Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012002-T1KJC3_012002-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012002-T1.cdsKJC3_012002-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012002-T1.utr3p1KJC3_012002-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012002-T1.exon3KJC3_012002-T1.exon3Aspergillus niger KJC3exon
KJC3_012002-T1.exon2KJC3_012002-T1.exon2Aspergillus niger KJC3exon
KJC3_012002-T1.exon1KJC3_012002-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012002-T1.utr5p1KJC3_012002-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265AL8
DBxrefInterPro:IPR023601
DBxrefPFAM:PF12352
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2269385..2270672 -