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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2269385..2270672- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012002-T1 ID=KJC3_012002-T1|Name=KJC3_012002-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1288bp|location=Sequence derived from alignment at ch8:2269385..2270672- (Aspergillus niger KJC3)
GTTGTCGTTGCTGTTGCTGTGCCGCCGGTCGGATCATGTTGCGTTGGTTA
TGACGGGGTTTGTCCTGAAGCTAGCATTACACTCTTCATTCTATATTCCC
GACTTGCCGGAGACTTATCGTCGTTATCGGTGTCGTTGATCAACCTCTTT
CTGCTTTCTACACACACACACATCACTCGCAACCAACCTACCTACCTATA
TACACCCTCATATTATCGTAATCCATCATCCATGGCCACCTCAACCGGTA
CCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGGTA
CGAGCATCGCTTCCCTGTCATACGGAATGGAAATCCTAACAATGTGTATA
CATGATCATAGACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCG
TTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATC
GCAGCTCAAAGACCTCCTAGAACGAGTACGCATCCACTATGCCCATTCCA
TCACAGTTACCATCCTAATACCACAATCACATGAACTAATCTAATGGATC
AATCACCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTC
CGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCC
ACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCT
GCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTC
CGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATT
ACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGAT
GGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCG
TGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGG
TGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGG
GATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCT
TTGGTTGAGGTGAGGGTTGCTTTACTTTGTTTGAAGCATGTTGTGTTTGT
GTTTGTTGTCTGCGTTGTCTATTGTGGGTTTGGGATGGGCGTTTGGAGGA
GTGAGATTTGTCTCTTTCTTCTATTCTTTTCTTTGTCTATGCGCTGTCGT
TGCGTCTATACTATACAGAGATTAATGGTGGGGGGAGATTTGTTTCCTGG
TGTCCGTGGTGTTTGGAGCATATTCCACTCTCACTCAC back to topCoding sequence (CDS) from alignment at ch8:2269385..2270672- >KJC3_012002-T1 ID=KJC3_012002-T1|Name=KJC3_012002-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch8:2269385..2270672- (Aspergillus niger KJC3)
CGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAAC
CCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAG
TCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCC
GAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGA
TGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTG
AGGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTG
AGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAGACGCT
CGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCA
TGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGGGATGCGTTG
ATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAG
GTGAACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGA
AGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATCGCAGCTC
AAAGACCTCCTAGAACGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGCGCGACTCTCTGATCT
CCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCC
CTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCG
TCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCG
CTAATCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCG
AACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGAT
TGATGAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTA
TTAATGAGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGA
CGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGG
GAAGATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTA
TTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAACCGAGAACCTC
TTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACC
CTCGGAGGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAAC
GAATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCC
CGATCTCTCGAGACTCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCT
CCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACC
TCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGT
CTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAA
CGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGG
AAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAAT
ATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGG
TCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGG
CGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAG
AGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTT
GATGTTGCTTTGGTTGAGGTGAACCGAGAACCTCTTCCACACATACTCTC
AATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAG
CGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAATGGCCACCTCAAC
CGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTC
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0005801 | cis-Golgi network |
| GO:0000139 | Golgi membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012002-T1.utr3p1 | KJC3_012002-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012002-T1.utr5p1 | KJC3_012002-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265AL8 |
| DBxref | InterPro:IPR023601 |
| DBxref | PFAM:PF12352 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2269385..2270672 - |
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